RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 ZNF878C9JN71 531 aa17.28■□□□□ 0.36
FOXA1-203ENST00000553751 PPIHO43447 177 aaKnown RBP17.28■□□□□ 0.36
FOXA1-203ENST00000553751 LCATP04180 440 aa17.28■□□□□ 0.36
FOXA1-203ENST00000553751 EPHA2P29317 976 aa17.28■□□□□ 0.36
FOXA1-203ENST00000553751 EIF2B1Q14232 305 aaKnown RBP17.28■□□□□ 0.36
FOXA1-203ENST00000553751 GK2Q14410 553 aaPredicted RBP17.28■□□□□ 0.36
FOXA1-203ENST00000553751 SNAPC1Q16533 368 aa17.28■□□□□ 0.36
FOXA1-203ENST00000553751 CXXC5Q7LFL8 322 aaKnown RBP17.28■□□□□ 0.36
FOXA1-203ENST00000553751 OR5AS1Q8N127 324 aa17.28■□□□□ 0.36
FOXA1-203ENST00000553751 HPS1Q92902 700 aa17.28■□□□□ 0.36
FOXA1-203ENST00000553751 MSI2Q96DH6 328 aaKnown RBP17.28■□□□□ 0.36
FOXA1-203ENST00000553751 ELMOD3Q96FG2 381 aa17.28■□□□□ 0.36
FOXA1-203ENST00000553751 EGLN1Q9GZT9 426 aa17.28■□□□□ 0.36
FOXA1-203ENST00000553751 TVP23BQ9NYZ1 205 aa17.28■□□□□ 0.36
FOXA1-203ENST00000553751 TMEFF2Q9UIK5 374 aaPredicted RBP17.28■□□□□ 0.36
FOXA1-203ENST00000553751 OAZ3Q9UMX2 235 aa17.28■□□□□ 0.36
FOXA1-203ENST00000553751 IQCF6A8MYZ5 107 aa17.27■□□□□ 0.36
FOXA1-203ENST00000553751 H3BNX3 289 aa17.27■□□□□ 0.36
FOXA1-203ENST00000553751 WNT9BO14905 357 aa17.27■□□□□ 0.36
FOXA1-203ENST00000553751 SLC6A9P48067 706 aa17.27■□□□□ 0.36
FOXA1-203ENST00000553751 PRSS12P56730 875 aa17.27■□□□□ 0.36
FOXA1-203ENST00000553751 TNFAIP6P98066 277 aaPredicted RBP17.27■□□□□ 0.36
FOXA1-203ENST00000553751 SNAI3Q3KNW1 292 aa17.27■□□□□ 0.36
FOXA1-203ENST00000553751 KLHL12Q53G59 568 aa17.27■□□□□ 0.36
FOXA1-203ENST00000553751 SLC35D3Q5M8T2 416 aa17.27■□□□□ 0.36
FOXA1-203ENST00000553751 DRAM2Q6UX65 266 aa17.27■□□□□ 0.36
FOXA1-203ENST00000553751 SPATC1Q76KD6 591 aa17.27■□□□□ 0.36
FOXA1-203ENST00000553751 OR8G5Q8NG78 346 aa17.27■□□□□ 0.36
FOXA1-203ENST00000553751 OR2Z1Q8NG97 314 aa17.27■□□□□ 0.36
FOXA1-203ENST00000553751 RNF133Q8WVZ7 376 aa17.27■□□□□ 0.36
FOXA1-203ENST00000553751 AMELYQ99218 206 aa17.27■□□□□ 0.36
FOXA1-203ENST00000553751 KCNJ15Q99712 375 aa17.27■□□□□ 0.36
FOXA1-203ENST00000553751 ABHD6Q9BV23 337 aa17.27■□□□□ 0.36
FOXA1-203ENST00000553751 CENPMQ9NSP4 180 aa17.27■□□□□ 0.36
FOXA1-203ENST00000553751 MALRD1Q5VYJ5 2156 aa17.27■□□□□ 0.36
FOXA1-203ENST00000553751 TANC2Q9HCD6 1990 aa17.27■□□□□ 0.36
FOXA1-203ENST00000553751 C5orf63A6NC05 138 aa17.26■□□□□ 0.35
FOXA1-203ENST00000553751 ZAR1LA6NP61 321 aa17.26■□□□□ 0.35
FOXA1-203ENST00000553751 PRKYO43930 277 aa17.26■□□□□ 0.35
FOXA1-203ENST00000553751 SELENOFO60613 162 aa17.26■□□□□ 0.35
FOXA1-203ENST00000553751 CRLF1O75462 422 aa17.26■□□□□ 0.35
FOXA1-203ENST00000553751 IGFBP5P24593 272 aa17.26■□□□□ 0.35
FOXA1-203ENST00000553751 PRKXP51817 358 aa17.26■□□□□ 0.35
FOXA1-203ENST00000553751 MALLQ13021 153 aa17.26■□□□□ 0.35
FOXA1-203ENST00000553751 HFEQ30201 348 aa17.26■□□□□ 0.35
FOXA1-203ENST00000553751 SLX4IPQ5VYV7 408 aa17.26■□□□□ 0.35
FOXA1-203ENST00000553751 SHFQ7M4L6 423 aa17.26■□□□□ 0.35
FOXA1-203ENST00000553751 CLDND2Q8NHS1 167 aa17.26■□□□□ 0.35
FOXA1-203ENST00000553751 ZNF582Q96NG8 517 aaPredicted RBP17.26■□□□□ 0.35
FOXA1-203ENST00000553751 CIB1Q99828 191 aa17.26■□□□□ 0.35
FOXA1-203ENST00000553751 NARFLQ9H6Q4 476 aa17.26■□□□□ 0.35
FOXA1-203ENST00000553751 SAC3D1A6NKF1 404 aa17.25■□□□□ 0.35
FOXA1-203ENST00000553751 CLDN25C9JDP6 229 aa17.25■□□□□ 0.35
FOXA1-203ENST00000553751 M0R129 80 aa17.25■□□□□ 0.35
FOXA1-203ENST00000553751 SELEP16581 610 aa17.25■□□□□ 0.35
FOXA1-203ENST00000553751 TNFSF4P23510 183 aa17.25■□□□□ 0.35
FOXA1-203ENST00000553751 OPRL1P41146 370 aa17.25■□□□□ 0.35
FOXA1-203ENST00000553751 NAA10P41227 235 aaPredicted RBP17.25■□□□□ 0.35
FOXA1-203ENST00000553751 RPS7P62081 194 aaKnown RBP17.25■□□□□ 0.35
FOXA1-203ENST00000553751 GRB2P62993 217 aaKnown RBP17.25■□□□□ 0.35
FOXA1-203ENST00000553751 HNRNPA0Q13151 305 aaKnown RBP17.25■□□□□ 0.35
FOXA1-203ENST00000553751 TAF13Q15543 124 aa17.25■□□□□ 0.35
FOXA1-203ENST00000553751 AVPI1Q5T686 147 aa17.25■□□□□ 0.35
FOXA1-203ENST00000553751 C12orf73Q69YU5 71 aa17.25■□□□□ 0.35
FOXA1-203ENST00000553751 BHLHE23Q8NDY6 225 aa17.25■□□□□ 0.35
FOXA1-203ENST00000553751 OR10AD1Q8NGE0 317 aa17.25■□□□□ 0.35
FOXA1-203ENST00000553751 OTOSQ8NHW6 89 aa17.25■□□□□ 0.35
FOXA1-203ENST00000553751 CCL17Q92583 94 aa17.25■□□□□ 0.35
FOXA1-203ENST00000553751 C1orf159Q96HA4 380 aa17.25■□□□□ 0.35
FOXA1-203ENST00000553751 PKP2Q99959 881 aa17.25■□□□□ 0.35
FOXA1-203ENST00000553751 SLC30A2Q9BRI3 323 aa17.25■□□□□ 0.35
FOXA1-203ENST00000553751 PRRG3Q9BZD7 231 aa17.25■□□□□ 0.35
FOXA1-203ENST00000553751 TREM2Q9NZC2 230 aa17.25■□□□□ 0.35
FOXA1-203ENST00000553751 SVEP1Q4LDE5 3571 aa17.24■□□□□ 0.35
FOXA1-203ENST00000553751 LOC100289279A0A1B0GTE1 492 aa17.24■□□□□ 0.35
FOXA1-203ENST00000553751 A0A1B0GWJ7 208 aa17.24■□□□□ 0.35
FOXA1-203ENST00000553751 CCDC182A6NF36 153 aa17.24■□□□□ 0.35
FOXA1-203ENST00000553751 SLC2A1P11166 492 aa17.24■□□□□ 0.35
FOXA1-203ENST00000553751 SLC15A1P46059 708 aa17.24■□□□□ 0.35
FOXA1-203ENST00000553751 ZNF92Q03936 586 aa17.24■□□□□ 0.35
FOXA1-203ENST00000553751 APOFQ13790 326 aa17.24■□□□□ 0.35
FOXA1-203ENST00000553751 GLYATL3Q5SZD4 288 aa17.24■□□□□ 0.35
FOXA1-203ENST00000553751 ZFP1Q6P2D0 407 aa17.24■□□□□ 0.35
FOXA1-203ENST00000553751 PGAP1Q75T13 922 aa17.24■□□□□ 0.35
FOXA1-203ENST00000553751 RHOUQ7L0Q8 258 aa17.24■□□□□ 0.35
FOXA1-203ENST00000553751 OR2AE1Q8NHA4 323 aa17.24■□□□□ 0.35
FOXA1-203ENST00000553751 TOR3AQ9H497 397 aa17.24■□□□□ 0.35
FOXA1-203ENST00000553751 IL19Q9UHD0 177 aa17.24■□□□□ 0.35
FOXA1-203ENST00000553751 ENOPH1Q9UHY7 261 aa17.24■□□□□ 0.35
FOXA1-203ENST00000553751 KLHDC2Q9Y2U9 406 aa17.24■□□□□ 0.35
FOXA1-203ENST00000553751 WIPI2Q9Y4P8 454 aa17.24■□□□□ 0.35
FOXA1-203ENST00000553751 MLNRO43193 412 aa17.23■□□□□ 0.35
FOXA1-203ENST00000553751 LYNP07948 512 aa17.23■□□□□ 0.35
FOXA1-203ENST00000553751 TNFRSF1AP19438 455 aa17.23■□□□□ 0.35
FOXA1-203ENST00000553751 CX3CR1P49238 355 aa17.23■□□□□ 0.35
FOXA1-203ENST00000553751 EFNB1P98172 346 aa17.23■□□□□ 0.35
FOXA1-203ENST00000553751 MVKQ03426 396 aa17.23■□□□□ 0.35
FOXA1-203ENST00000553751 FAM166AQ6J272 317 aa17.23■□□□□ 0.35
FOXA1-203ENST00000553751 MRPL21Q7Z2W9 205 aaKnown RBP17.23■□□□□ 0.35
FOXA1-203ENST00000553751 ZNF283Q8N7M2 679 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms