RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 RCN3Q96D15 328 aa3.35□□□□□ -1.87
SCFD1-209ENST00000553280 SGTBQ96EQ0 304 aa3.35□□□□□ -1.87
SCFD1-209ENST00000553280 UQCC2Q9BRT2 126 aa3.35□□□□□ -1.87
SCFD1-209ENST00000553280 SAV1Q9H4B6 383 aaPredicted RBP3.35□□□□□ -1.87
SCFD1-209ENST00000553280 EDA2RQ9HAV5 297 aa3.35□□□□□ -1.87
SCFD1-209ENST00000553280 MED4Q9NPJ6 270 aa3.35□□□□□ -1.87
SCFD1-209ENST00000553280 AGPAT3Q9NRZ7 376 aa3.35□□□□□ -1.87
SCFD1-209ENST00000553280 ADA2Q9NZK5 511 aa3.35□□□□□ -1.87
SCFD1-209ENST00000553280 TRBV6-6A0A0A6YYG2 114 aa3.34□□□□□ -1.87
SCFD1-209ENST00000553280 HACD1B0YJ81 288 aa3.34□□□□□ -1.87
SCFD1-209ENST00000553280 M0QX08 132 aa3.34□□□□□ -1.87
SCFD1-209ENST00000553280 TCN2P20062 427 aa3.34□□□□□ -1.87
SCFD1-209ENST00000553280 ARG2P78540 354 aa3.34□□□□□ -1.87
SCFD1-209ENST00000553280 VAMP3Q15836 100 aa3.34□□□□□ -1.87
SCFD1-209ENST00000553280 CYB5R2Q6BCY4 276 aa3.34□□□□□ -1.87
SCFD1-209ENST00000553280 NCCRP1Q6ZVX7 275 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-209ENST00000553280 PRSS58Q8IYP2 241 aa3.34□□□□□ -1.87
SCFD1-209ENST00000553280 TRIML2Q8N7C3 387 aa3.34□□□□□ -1.87
SCFD1-209ENST00000553280 FAM86B1Q8N7N1 296 aa3.34□□□□□ -1.87
SCFD1-209ENST00000553280 COX18Q8N8Q8 333 aa3.34□□□□□ -1.87
SCFD1-209ENST00000553280 OR11H7Q8NGC8 314 aa3.34□□□□□ -1.87
SCFD1-209ENST00000553280 ZNF596Q8TC21 504 aa3.34□□□□□ -1.87
SCFD1-209ENST00000553280 ABHD3Q8WU67 409 aa3.34□□□□□ -1.87
SCFD1-209ENST00000553280 OR8D1Q8WZ84 308 aa3.34□□□□□ -1.87
SCFD1-209ENST00000553280 TMIGD2Q96BF3 282 aa3.34□□□□□ -1.87
SCFD1-209ENST00000553280 SCGB3A2Q96PL1 93 aa3.34□□□□□ -1.87
SCFD1-209ENST00000553280 SPNS1Q9H2V7 528 aa3.34□□□□□ -1.87
SCFD1-209ENST00000553280 IFI27L2Q9H2X8 130 aa3.34□□□□□ -1.87
SCFD1-209ENST00000553280 ASB8Q9H765 288 aa3.34□□□□□ -1.87
SCFD1-209ENST00000553280 REEP1Q9H902 201 aa3.34□□□□□ -1.87
SCFD1-209ENST00000553280 SLC40A1Q9NP59 571 aa3.34□□□□□ -1.87
SCFD1-209ENST00000553280 RBAKQ9NYW8 714 aaPredicted RBP3.34□□□□□ -1.87
SCFD1-209ENST00000553280 SLC17A7Q9P2U7 560 aa3.34□□□□□ -1.87
SCFD1-209ENST00000553280 NEU3Q9UQ49 428 aa3.34□□□□□ -1.87
SCFD1-209ENST00000553280 ASTN1O14525 1302 aa3.34□□□□□ -1.87
SCFD1-209ENST00000553280 ADAMTS9Q9P2N4 1935 aa3.34□□□□□ -1.88
SCFD1-209ENST00000553280 IGHV3OR16-9A0A0B4J2B5 98 aa3.33□□□□□ -1.88
SCFD1-209ENST00000553280 A0A0J9YXV3 536 aa3.33□□□□□ -1.88
SCFD1-209ENST00000553280 WI2-2373I1.2A0A1W2PRP0 233 aa3.33□□□□□ -1.88
SCFD1-209ENST00000553280 OR6C74A6NCV1 312 aa3.33□□□□□ -1.88
SCFD1-209ENST00000553280 PDZK1P1A8MUH7 402 aa3.33□□□□□ -1.88
SCFD1-209ENST00000553280 ANKRD63C9JTQ0 380 aa3.33□□□□□ -1.88
SCFD1-209ENST00000553280 INS-IGF2F8WCM5 200 aa3.33□□□□□ -1.88
SCFD1-209ENST00000553280 ENTPD5O75356 428 aa3.33□□□□□ -1.88
SCFD1-209ENST00000553280 PAHP00439 452 aa3.33□□□□□ -1.88
SCFD1-209ENST00000553280 BCHEP06276 602 aa3.33□□□□□ -1.88
SCFD1-209ENST00000553280 OR8U9P0C7N5 309 aa3.33□□□□□ -1.88
SCFD1-209ENST00000553280 MYL9P24844 172 aa3.33□□□□□ -1.88
SCFD1-209ENST00000553280 ERCC8Q13216 396 aa3.33□□□□□ -1.88
SCFD1-209ENST00000553280 ORMDL2Q53FV1 153 aa3.33□□□□□ -1.88
SCFD1-209ENST00000553280 C6orf183Q5T699 404 aa3.33□□□□□ -1.88
SCFD1-209ENST00000553280 FAM92BQ6ZTR7 304 aa3.33□□□□□ -1.88
SCFD1-209ENST00000553280 MKXQ8IYA7 352 aa3.33□□□□□ -1.88
SCFD1-209ENST00000553280 ARIH2OSQ8N7S6 290 aa3.33□□□□□ -1.88
SCFD1-209ENST00000553280 OR6K6Q8NGW6 343 aa3.33□□□□□ -1.88
SCFD1-209ENST00000553280 OR8U1Q8NH10 309 aa3.33□□□□□ -1.88
SCFD1-209ENST00000553280 NDNFQ8TB73 568 aa3.33□□□□□ -1.88
SCFD1-209ENST00000553280 LRRC20Q8TCA0 184 aa3.33□□□□□ -1.88
SCFD1-209ENST00000553280 ASZ1Q8WWH4 475 aa3.33□□□□□ -1.88
SCFD1-209ENST00000553280 DCPSQ96C86 337 aaKnown RBP3.33□□□□□ -1.88
SCFD1-209ENST00000553280 NOX3Q9HBY0 568 aa3.33□□□□□ -1.88
SCFD1-209ENST00000553280 GGA2Q9UJY4 613 aa3.33□□□□□ -1.88
SCFD1-209ENST00000553280 IGHV5-51A0A0C4DH38 117 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 A8MU10 97 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 RFXANKO14593 260 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 RNF113AO15541 343 aaKnown RBP3.32□□□□□ -1.88
SCFD1-209ENST00000553280 NMT2O60551 498 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 SLC16A7O60669 478 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 RP2O75695 350 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 SEMA3DO95025 777 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 PLEKHA8P1O95397 391 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 LCA5LO95447 670 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 APOA1P02647 267 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 GLAP06280 429 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 CD37P11049 281 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 CCNOP22674 350 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 MYCNOSP40205 109 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 RBM34P42696 430 aaKnown RBP3.32□□□□□ -1.88
SCFD1-209ENST00000553280 PPICP45877 212 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 SYNJ2BPP57105 145 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 OR2B8PP59922 312 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 RPL18AQ02543 176 aaKnown RBP3.32□□□□□ -1.88
SCFD1-209ENST00000553280 ATP6V1FQ16864 119 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 AVPI1Q5T686 147 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 CEMP1Q6PRD7 247 aaPredicted RBP3.32□□□□□ -1.88
SCFD1-209ENST00000553280 PID1Q7Z2X4 250 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 ST13P4Q8IZP2 240 aaPredicted RBP3.32□□□□□ -1.88
SCFD1-209ENST00000553280 C15orf56Q8N910 161 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 WDR31Q8NA23 367 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 FAM104AQ969W3 186 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 HAUS1Q96CS2 278 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 RNF170Q96K19 258 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 MAP1LC3CQ9BXW4 147 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 SLIRPQ9GZT3 109 aaKnown RBP3.32□□□□□ -1.88
SCFD1-209ENST00000553280 RPP21Q9H633 154 aaKnown RBP3.32□□□□□ -1.88
SCFD1-209ENST00000553280 SYNDIG1Q9H7V2 258 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 MYOZ1Q9NP98 299 aaPredicted RBP3.32□□□□□ -1.88
SCFD1-209ENST00000553280 CTSFQ9UBX1 484 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 UBIAD1Q9Y5Z9 338 aa3.32□□□□□ -1.88
SCFD1-209ENST00000553280 PCDH11XQ9BZA7 1347 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms