RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 OOEPA6NGQ2 149 aa10.54□□□□□ -0.72
VPS29-211ENST00000553128 IMPA2O14732 288 aa10.54□□□□□ -0.72
VPS29-211ENST00000553128 FBXO24O75426 580 aa10.54□□□□□ -0.72
VPS29-211ENST00000553128 CTLA4P16410 223 aa10.54□□□□□ -0.72
VPS29-211ENST00000553128 MSX2P35548 267 aaPredicted RBP10.54□□□□□ -0.72
VPS29-211ENST00000553128 RBM34P42696 430 aaKnown RBP10.54□□□□□ -0.72
VPS29-211ENST00000553128 RGS6P49758 472 aa10.54□□□□□ -0.72
VPS29-211ENST00000553128 AQP6Q13520 282 aa10.54□□□□□ -0.72
VPS29-211ENST00000553128 PIN1Q13526 163 aaPredicted RBP10.54□□□□□ -0.72
VPS29-211ENST00000553128 RSPO1Q2MKA7 263 aaPredicted RBP10.54□□□□□ -0.72
VPS29-211ENST00000553128 BEND6Q5SZJ8 279 aaPredicted RBP10.54□□□□□ -0.72
VPS29-211ENST00000553128 CRIP3Q6Q6R5 217 aa10.54□□□□□ -0.72
VPS29-211ENST00000553128 BLOC1S3Q6QNY0 202 aa10.54□□□□□ -0.72
VPS29-211ENST00000553128 METAP1DQ6UB28 335 aaPredicted RBP10.54□□□□□ -0.72
VPS29-211ENST00000553128 DLEU7Q6UYE1 221 aa10.54□□□□□ -0.72
VPS29-211ENST00000553128 ZNF826PQ6ZT77 177 aa10.54□□□□□ -0.72
VPS29-211ENST00000553128 C11orf65Q8NCR3 313 aa10.54□□□□□ -0.72
VPS29-211ENST00000553128 OR5L1Q8NGL2 311 aa10.54□□□□□ -0.72
VPS29-211ENST00000553128 OR4C13Q8NGP0 309 aa10.54□□□□□ -0.72
VPS29-211ENST00000553128 OR2T6Q8NHC8 308 aa10.54□□□□□ -0.72
VPS29-211ENST00000553128 FNDC8Q8TC99 324 aa10.54□□□□□ -0.72
VPS29-211ENST00000553128 NPRL2Q8WTW4 380 aa10.54□□□□□ -0.72
VPS29-211ENST00000553128 TNFRSF14Q92956 283 aa10.54□□□□□ -0.72
VPS29-211ENST00000553128 ERGIC1Q969X5 290 aa10.54□□□□□ -0.72
VPS29-211ENST00000553128 APOBEC3DQ96AK3 386 aaPredicted RBP10.54□□□□□ -0.72
VPS29-211ENST00000553128 SPDL1Q96EA4 605 aa10.54□□□□□ -0.72
VPS29-211ENST00000553128 CITED2Q99967 270 aaPredicted RBP10.54□□□□□ -0.72
VPS29-211ENST00000553128 CAB39Q9Y376 341 aaPredicted RBP10.54□□□□□ -0.72
VPS29-211ENST00000553128 TRAV27A0A087WT01 109 aa10.53□□□□□ -0.72
VPS29-211ENST00000553128 EVPLLA8MZ36 301 aa10.53□□□□□ -0.72
VPS29-211ENST00000553128 J3QW42 95 aa10.53□□□□□ -0.72
VPS29-211ENST00000553128 CHST1O43916 411 aa10.53□□□□□ -0.72
VPS29-211ENST00000553128 PAHP00439 452 aa10.53□□□□□ -0.72
VPS29-211ENST00000553128 IGF2P01344 180 aa10.53□□□□□ -0.72
VPS29-211ENST00000553128 CA6P23280 308 aa10.53□□□□□ -0.72
VPS29-211ENST00000553128 WDR4P57081 412 aaKnown RBP10.53□□□□□ -0.72
VPS29-211ENST00000553128 COL10A1Q03692 680 aa10.53□□□□□ -0.72
VPS29-211ENST00000553128 CD69Q07108 199 aa10.53□□□□□ -0.72
VPS29-211ENST00000553128 GK2Q14410 553 aaPredicted RBP10.53□□□□□ -0.72
VPS29-211ENST00000553128 KCNJ8Q15842 424 aa10.53□□□□□ -0.72
VPS29-211ENST00000553128 PGBD2Q6P3X8 592 aa10.53□□□□□ -0.72
VPS29-211ENST00000553128 C11orf88Q6PI97 169 aa10.53□□□□□ -0.72
VPS29-211ENST00000553128 GCSAMQ8N6F7 178 aa10.53□□□□□ -0.72
VPS29-211ENST00000553128 SPERTQ8NA61 448 aa10.53□□□□□ -0.72
VPS29-211ENST00000553128 OR51A7Q8NH64 312 aa10.53□□□□□ -0.72
VPS29-211ENST00000553128 AJUBAQ96IF1 538 aa10.53□□□□□ -0.72
VPS29-211ENST00000553128 SSX3Q99909 188 aa10.53□□□□□ -0.72
VPS29-211ENST00000553128 WACQ9BTA9 647 aa10.53□□□□□ -0.72
VPS29-211ENST00000553128 SSU72Q9NP77 194 aaKnown RBP10.53□□□□□ -0.72
VPS29-211ENST00000553128 KCNK9Q9NPC2 374 aa10.53□□□□□ -0.72
VPS29-211ENST00000553128 THAP1Q9NVV9 213 aa10.53□□□□□ -0.72
VPS29-211ENST00000553128 CCDC167Q9P0B6 97 aa10.53□□□□□ -0.72
VPS29-211ENST00000553128 RIMS3Q9UJD0 308 aa10.53□□□□□ -0.72
VPS29-211ENST00000553128 ADAM18Q9Y3Q7 739 aa10.53□□□□□ -0.72
VPS29-211ENST00000553128 MAB21L2Q9Y586 359 aa10.53□□□□□ -0.72
VPS29-211ENST00000553128 TRAV38-1A0A0B4J264 116 aa10.52□□□□□ -0.73
VPS29-211ENST00000553128 A6NIZ1 184 aa10.52□□□□□ -0.73
VPS29-211ENST00000553128 ECDO95905 644 aaPredicted RBP10.52□□□□□ -0.73
VPS29-211ENST00000553128 CD33P20138 364 aa10.52□□□□□ -0.73
VPS29-211ENST00000553128 ANOS1P23352 680 aa10.52□□□□□ -0.73
VPS29-211ENST00000553128 EEF1B2P24534 225 aaKnown RBP10.52□□□□□ -0.73
VPS29-211ENST00000553128 MTPNP58546 118 aa10.52□□□□□ -0.73
VPS29-211ENST00000553128 TAS2R41P59536 307 aa10.52□□□□□ -0.73
VPS29-211ENST00000553128 RAP1BP61224 184 aa10.52□□□□□ -0.73
VPS29-211ENST00000553128 RAP1AP62834 184 aa10.52□□□□□ -0.73
VPS29-211ENST00000553128 EMX1Q04741 257 aaPredicted RBP10.52□□□□□ -0.73
VPS29-211ENST00000553128 CYP51A1Q16850 503 aa10.52□□□□□ -0.73
VPS29-211ENST00000553128 MESTQ5EB52 335 aa10.52□□□□□ -0.73
VPS29-211ENST00000553128 NAA40Q86UY6 237 aa10.52□□□□□ -0.73
VPS29-211ENST00000553128 NDUFA11Q86Y39 141 aa10.52□□□□□ -0.73
VPS29-211ENST00000553128 BEND2Q8NDZ0 799 aa10.52□□□□□ -0.73
VPS29-211ENST00000553128 WFDC9Q8NEX5 89 aa10.52□□□□□ -0.73
VPS29-211ENST00000553128 OR4F17Q8NGA8 305 aa10.52□□□□□ -0.73
VPS29-211ENST00000553128 WIPF2Q8TF74 440 aaPredicted RBP10.52□□□□□ -0.73
VPS29-211ENST00000553128 CLPTM1LQ96KA5 538 aa10.52□□□□□ -0.73
VPS29-211ENST00000553128 OR4F4Q96R69 305 aa10.52□□□□□ -0.73
VPS29-211ENST00000553128 CCL13Q99616 98 aa10.52□□□□□ -0.73
VPS29-211ENST00000553128 KRTAP17-1Q9BYP8 105 aa10.52□□□□□ -0.73
VPS29-211ENST00000553128 FN3KRPQ9HA64 309 aa10.52□□□□□ -0.73
VPS29-211ENST00000553128 SERTAD4Q9NUC0 356 aa10.52□□□□□ -0.73
VPS29-211ENST00000553128 C1orf123Q9NWV4 160 aa10.52□□□□□ -0.73
VPS29-211ENST00000553128 CORO2BQ9UQ03 480 aa10.52□□□□□ -0.73
VPS29-211ENST00000553128 SH3GLB1Q9Y371 365 aa10.52□□□□□ -0.73
VPS29-211ENST00000553128 MED31Q9Y3C7 131 aa10.52□□□□□ -0.73
VPS29-211ENST00000553128 TEX13CA0A0J9YWL9 993 aa10.51□□□□□ -0.73
VPS29-211ENST00000553128 NDUFA2O43678 99 aa10.51□□□□□ -0.73
VPS29-211ENST00000553128 OR5F1O95221 314 aa10.51□□□□□ -0.73
VPS29-211ENST00000553128 PTBP3O95758 552 aaKnown RBP10.51□□□□□ -0.73
VPS29-211ENST00000553128 IFI30P13284 250 aa10.51□□□□□ -0.73
VPS29-211ENST00000553128 GUCA2AQ02747 115 aa10.51□□□□□ -0.73
VPS29-211ENST00000553128 OR8G1Q15617 311 aa10.51□□□□□ -0.73
VPS29-211ENST00000553128 KRT71Q3SY84 523 aa10.51□□□□□ -0.73
VPS29-211ENST00000553128 CORO6Q6QEF8 472 aa10.51□□□□□ -0.73
VPS29-211ENST00000553128 COLCA1Q6ZS62 124 aa10.51□□□□□ -0.73
VPS29-211ENST00000553128 FAM216BQ8N7L0 139 aa10.51□□□□□ -0.73
VPS29-211ENST00000553128 ANKRD42Q8N9B4 389 aa10.51□□□□□ -0.73
VPS29-211ENST00000553128 SLCO4A1Q96BD0 722 aa10.51□□□□□ -0.73
VPS29-211ENST00000553128 BPIFA2Q96DR5 249 aa10.51□□□□□ -0.73
VPS29-211ENST00000553128 SEH1LQ96EE3 360 aa10.51□□□□□ -0.73
VPS29-211ENST00000553128 Q96M85 177 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms