RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 MPIP34949 423 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 RPA3P35244 121 aaPredicted RBP5.17□□□□□ -1.58
VPS29-210ENST00000552130 HRH1P35367 487 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 CEACAM6P40199 344 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 PMELP40967 661 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 ACOT2P49753 483 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 RAB7AP51149 207 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 P2RY4P51582 365 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 SUB1P53999 127 aaKnown RBP eCLIP5.17□□□□□ -1.585e-6■■■■■ 28.3
VPS29-210ENST00000552130 POU6F1Q14863 301 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 MS4A13Q5J8X5 152 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 TEX30Q5JUR7 227 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 GPRC6AQ5T6X5 926 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 TFAP2EQ6VUC0 442 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 TMEM150AQ86TG1 271 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 CBLN2Q8IUK8 224 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 CPNE9Q8IYJ1 553 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 SVOPLQ8N434 492 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 ZNF557Q8N988 423 aaPredicted RBP5.17□□□□□ -1.58
VPS29-210ENST00000552130 OR5AR1Q8NGP9 310 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 OR4C3Q8NH37 302 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 OR52N1Q8NH53 320 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 CASTOR1Q8WTX7 329 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 PCNPQ8WW12 178 aaKnown RBP5.17□□□□□ -1.58
VPS29-210ENST00000552130 TMEM234Q8WY98 164 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 MAFIPQ8WZ33 124 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 RILPQ96NA2 401 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 COL21A1Q96P44 957 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 ALKBH3Q96Q83 286 aaPredicted RBP5.17□□□□□ -1.58
VPS29-210ENST00000552130 ZNF442Q9H7R0 627 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 CES1P1Q9UKY3 287 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 MMP17Q9ULZ9 603 aa5.17□□□□□ -1.58
VPS29-210ENST00000552130 ZNF816-ZNF321PA0A0X1KG74 233 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 A0A1B0GVT2 93 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 RPS10-NUDT3A0A1W2PQS6 291 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 KMOO15229 486 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 TNFSF12O43508 249 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 NDUFA2O43678 99 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 ICOSLGO75144 302 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 BMP15O95972 392 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 MT-ND4P03905 459 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 NBEAP1P0C6P0 100 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 CDH1P12830 882 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 ZNF17P17021 662 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 IFNGR2P38484 337 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 GPM6AP51674 278 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 TFAMQ00059 246 aaKnown RBP5.16□□□□□ -1.58
VPS29-210ENST00000552130 SLC25A11Q02978 314 aaKnown RBP5.16□□□□□ -1.58
VPS29-210ENST00000552130 SIRPB2Q5JXA9 342 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 BRMS1LQ5PSV4 323 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 PXDC1Q5TGL8 231 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 EPGNQ6UW88 154 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 PRSS41Q7RTY9 318 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 DPPA2Q7Z7J5 298 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 PIM3Q86V86 326 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 NIT1Q86X76 327 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 ARRDC1Q8N5I2 433 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 OR10W1Q8NGF6 305 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 OR2T11Q8NH01 316 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 OR2T6Q8NHC8 308 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 RFESDQ8TAC1 157 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 ZNF564Q8TBZ8 553 aaPredicted RBP5.16□□□□□ -1.58
VPS29-210ENST00000552130 MRGPRDQ8TDS7 321 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 C16orf78Q8WTQ4 265 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 ZNRF4Q8WWF5 429 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 FGF11Q92914 225 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 RERGQ96A58 199 aaPredicted RBP5.16□□□□□ -1.58
VPS29-210ENST00000552130 WBP1Q96G27 269 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 TMEM80Q96HE8 168 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 ZNF597Q96LX8 424 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 ZNF778Q96MU6 729 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 PSMB7Q99436 277 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 VAT1Q99536 393 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 GABRG3Q99928 467 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 RARRES2Q99969 163 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 OSBPL11Q9BXB4 747 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 SLC19A3Q9BZV2 496 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 TRIM15Q9C019 465 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 MAP1LC3AQ9H492 121 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 ZNF430Q9H8G1 570 aaPredicted RBP5.16□□□□□ -1.58
VPS29-210ENST00000552130 FKRPQ9H9S5 495 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 FAM206AQ9NX38 181 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 FBXO5Q9UKT4 447 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 NDUFAF1Q9Y375 327 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 OR51B2Q9Y5P1 312 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 ALG5Q9Y673 324 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 MSH6P52701 1360 aa5.16□□□□□ -1.58
VPS29-210ENST00000552130 SNAPC4Q5SXM2 1469 aa5.15□□□□□ -1.58
VPS29-210ENST00000552130 LOC100131303A0A0U1RQF7 123 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 SMIM9A6NGZ8 99 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 GABRPO00591 440 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 UBDO15205 165 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 ZNF749O43361 778 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 MBTPS2O43462 519 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 ZG16O60844 167 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 PMS2P2O95744 297 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 IGHV4-39P01824 125 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 OR5AL1P0C617 328 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 OR9G9P0C7N8 305 aa5.15□□□□□ -1.59
VPS29-210ENST00000552130 ZDHHC11BP0C7U3 371 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms