RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 BEND6Q5SZJ8 279 aaPredicted RBP12.51□□□□□ -0.41
CACNB3-220ENST00000551716 LIAT1Q6ZQX7 453 aa12.51□□□□□ -0.41
CACNB3-220ENST00000551716 TSPYL5Q86VY4 417 aaPredicted RBP12.51□□□□□ -0.41
CACNB3-220ENST00000551716 LYG1Q8N1E2 194 aa12.51□□□□□ -0.41
CACNB3-220ENST00000551716 OR4D11Q8NGI4 311 aa12.51□□□□□ -0.41
CACNB3-220ENST00000551716 SLC26A7Q8TE54 656 aa12.51□□□□□ -0.41
CACNB3-220ENST00000551716 ST8SIA4Q92187 359 aa12.51□□□□□ -0.41
CACNB3-220ENST00000551716 SSX3Q99909 188 aa12.51□□□□□ -0.41
CACNB3-220ENST00000551716 C20orf141Q9NUB4 165 aa12.51□□□□□ -0.41
CACNB3-220ENST00000551716 E9PQ18 207 aa12.5□□□□□ -0.41
CACNB3-220ENST00000551716 C3orf84H3BNL1 204 aa12.5□□□□□ -0.41
CACNB3-220ENST00000551716 H3BUX3 64 aa12.5□□□□□ -0.41
CACNB3-220ENST00000551716 DUS4LO95620 317 aaKnown RBP12.5□□□□□ -0.41
CACNB3-220ENST00000551716 PTBP3O95758 552 aaKnown RBP12.5□□□□□ -0.41
CACNB3-220ENST00000551716 GYPAP02724 150 aa12.5□□□□□ -0.41
CACNB3-220ENST00000551716 OPN1SWP03999 348 aa12.5□□□□□ -0.41
CACNB3-220ENST00000551716 KITP10721 976 aa12.5□□□□□ -0.41
CACNB3-220ENST00000551716 IGLL1P15814 213 aa12.5□□□□□ -0.41
CACNB3-220ENST00000551716 SAA4P35542 130 aa12.5□□□□□ -0.41
CACNB3-220ENST00000551716 TAS2R41P59536 307 aa12.5□□□□□ -0.41
CACNB3-220ENST00000551716 MALLQ13021 153 aa12.5□□□□□ -0.41
CACNB3-220ENST00000551716 OR8G1Q15617 311 aa12.5□□□□□ -0.41
CACNB3-220ENST00000551716 PRAMEF6Q5VXH4 476 aa12.5□□□□□ -0.41
CACNB3-220ENST00000551716 NCR3LG1Q68D85 454 aa12.5□□□□□ -0.41
CACNB3-220ENST00000551716 BLOC1S3Q6QNY0 202 aa12.5□□□□□ -0.41
CACNB3-220ENST00000551716 NKAIN4Q8IVV8 208 aa12.5□□□□□ -0.41
CACNB3-220ENST00000551716 SLC7A13Q8TCU3 470 aa12.5□□□□□ -0.41
CACNB3-220ENST00000551716 TMEM255BQ8WV15 326 aa12.5□□□□□ -0.41
CACNB3-220ENST00000551716 SPRYD4Q8WW59 207 aaPredicted RBP12.5□□□□□ -0.41
CACNB3-220ENST00000551716 SIRT7Q9NRC8 400 aa12.5□□□□□ -0.41
CACNB3-220ENST00000551716 TRBV5-3A0A0A0MS03 114 aa12.49□□□□□ -0.41
CACNB3-220ENST00000551716 XKRYO14609 159 aa12.49□□□□□ -0.41
CACNB3-220ENST00000551716 GMDSO60547 372 aa12.49□□□□□ -0.41
CACNB3-220ENST00000551716 OR5F1O95221 314 aa12.49□□□□□ -0.41
CACNB3-220ENST00000551716 DBHP09172 617 aa12.49□□□□□ -0.41
CACNB3-220ENST00000551716 NHLRC4P0CG21 123 aaPredicted RBP12.49□□□□□ -0.41
CACNB3-220ENST00000551716 CD28P10747 220 aa12.49□□□□□ -0.41
CACNB3-220ENST00000551716 MRPL19P49406 292 aaKnown RBP12.49□□□□□ -0.41
CACNB3-220ENST00000551716 MZT1Q08AG7 82 aa12.49□□□□□ -0.41
CACNB3-220ENST00000551716 CYP51A1Q16850 503 aa12.49□□□□□ -0.41
CACNB3-220ENST00000551716 CCDC92Q53HC0 331 aaPredicted RBP12.49□□□□□ -0.41
CACNB3-220ENST00000551716 GJC3Q8NFK1 279 aa12.49□□□□□ -0.41
CACNB3-220ENST00000551716 SPDL1Q96EA4 605 aa12.49□□□□□ -0.41
CACNB3-220ENST00000551716 COQ7Q99807 217 aa12.49□□□□□ -0.41
CACNB3-220ENST00000551716 TMEM109Q9BVC6 243 aa12.49□□□□□ -0.41
CACNB3-220ENST00000551716 IKZF5Q9H5V7 419 aa12.49□□□□□ -0.41
CACNB3-220ENST00000551716 GRHPRQ9UBQ7 328 aa12.49□□□□□ -0.41
CACNB3-220ENST00000551716 RIMS3Q9UJD0 308 aa12.49□□□□□ -0.41
CACNB3-220ENST00000551716 TEX13CA0A0J9YWL9 993 aa12.48□□□□□ -0.41
CACNB3-220ENST00000551716 ZNF26P17031 533 aaPredicted RBP12.48□□□□□ -0.41
CACNB3-220ENST00000551716 COLCA1Q6ZS62 124 aa12.48□□□□□ -0.41
CACNB3-220ENST00000551716 SLC36A1Q7Z2H8 476 aa12.48□□□□□ -0.41
CACNB3-220ENST00000551716 FAM90A1Q86YD7 464 aa12.48□□□□□ -0.41
CACNB3-220ENST00000551716 GLB1L2Q8IW92 636 aa12.48□□□□□ -0.41
CACNB3-220ENST00000551716 OR51G2Q8NGK0 314 aa12.48□□□□□ -0.41
CACNB3-220ENST00000551716 RCC1LQ96I51 464 aaKnown RBP12.48□□□□□ -0.41
CACNB3-220ENST00000551716 PAIP2Q9BPZ3 127 aaKnown RBP12.48□□□□□ -0.41
CACNB3-220ENST00000551716 HDHD2Q9H0R4 259 aa12.48□□□□□ -0.41
CACNB3-220ENST00000551716 MEGF9Q9H1U4 602 aa12.48□□□□□ -0.41
CACNB3-220ENST00000551716 WDR76Q9H967 626 aa12.48□□□□□ -0.41
CACNB3-220ENST00000551716 SF3B6Q9Y3B4 125 aaKnown RBP12.48□□□□□ -0.41
CACNB3-220ENST00000551716 A0A1W2PRD5 423 aa12.47□□□□□ -0.41
CACNB3-220ENST00000551716 A0A1W2PRF3 423 aa12.47□□□□□ -0.41
CACNB3-220ENST00000551716 A0A1W2PRM7 423 aa12.47□□□□□ -0.41
CACNB3-220ENST00000551716 WI2-2373I1.2A0A1W2PRP0 233 aa12.47□□□□□ -0.41
CACNB3-220ENST00000551716 RER1O15258 196 aa12.47□□□□□ -0.41
CACNB3-220ENST00000551716 RGS16O15492 202 aaPredicted RBP12.47□□□□□ -0.41
CACNB3-220ENST00000551716 SNNO75324 88 aaPredicted RBP12.47□□□□□ -0.41
CACNB3-220ENST00000551716 PEX14O75381 377 aa12.47□□□□□ -0.41
CACNB3-220ENST00000551716 MUC1P15941 1255 aaPredicted RBP12.47□□□□□ -0.41
CACNB3-220ENST00000551716 SLC35A2P78381 396 aa12.47□□□□□ -0.41
CACNB3-220ENST00000551716 GK2Q14410 553 aaPredicted RBP12.47□□□□□ -0.41
CACNB3-220ENST00000551716 LY6EQ16553 131 aa12.47□□□□□ -0.41
CACNB3-220ENST00000551716 MICBQ29980 383 aa12.47□□□□□ -0.41
CACNB3-220ENST00000551716 LRRC75BQ2VPJ9 315 aa12.47□□□□□ -0.41
CACNB3-220ENST00000551716 PAGE3Q5JUK9 113 aa12.47□□□□□ -0.41
CACNB3-220ENST00000551716 ZBTB37Q5TC79 503 aa12.47□□□□□ -0.41
CACNB3-220ENST00000551716 TEX36Q5VZQ5 186 aa12.47□□□□□ -0.41
CACNB3-220ENST00000551716 PGAP1Q75T13 922 aa12.47□□□□□ -0.41
CACNB3-220ENST00000551716 LRRC75AQ8NAA5 344 aa12.47□□□□□ -0.41
CACNB3-220ENST00000551716 BPIFA2Q96DR5 249 aa12.47□□□□□ -0.41
CACNB3-220ENST00000551716 OR52B2Q96RD2 323 aa12.47□□□□□ -0.41
CACNB3-220ENST00000551716 CITED2Q99967 270 aaPredicted RBP12.47□□□□□ -0.41
CACNB3-220ENST00000551716 METTL8Q9H825 291 aaKnown RBP12.47□□□□□ -0.41
CACNB3-220ENST00000551716 KCNK9Q9NPC2 374 aa12.47□□□□□ -0.41
CACNB3-220ENST00000551716 C1orf123Q9NWV4 160 aa12.47□□□□□ -0.41
CACNB3-220ENST00000551716 PRSS37A4D1T9 235 aa12.46□□□□□ -0.41
CACNB3-220ENST00000551716 ADARB2-AS1A8MUL3 147 aa12.46□□□□□ -0.41
CACNB3-220ENST00000551716 NDUFB3O43676 98 aa12.46□□□□□ -0.41
CACNB3-220ENST00000551716 KHDRBS3O75525 346 aaKnown RBP12.46□□□□□ -0.41
CACNB3-220ENST00000551716 LHBP01229 141 aa12.46□□□□□ -0.41
CACNB3-220ENST00000551716 PAICSP22234 425 aaKnown RBP12.46□□□□□ -0.41
CACNB3-220ENST00000551716 CA6P23280 308 aa12.46□□□□□ -0.41
CACNB3-220ENST00000551716 IFNA8P32881 189 aa12.46□□□□□ -0.41
CACNB3-220ENST00000551716 MSX2P35548 267 aaPredicted RBP12.46□□□□□ -0.41
CACNB3-220ENST00000551716 BLMHQ13867 455 aa12.46□□□□□ -0.41
CACNB3-220ENST00000551716 PGM2L1Q6PCE3 622 aa12.46□□□□□ -0.41
CACNB3-220ENST00000551716 CRIP3Q6Q6R5 217 aa12.46□□□□□ -0.41
CACNB3-220ENST00000551716 Q8N7P7 452 aa12.46□□□□□ -0.41
CACNB3-220ENST00000551716 AENQ8WTP8 325 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms