RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 NOTCH3Q9UM47 2321 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 DNAH3Q8TD57 4116 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 IGHV3-38A0A0C4DH36 116 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 CCDC182A6NF36 153 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 MGAT4DA6NG13 374 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 G3V2L1 256 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 H3BMQ9 156 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 DNALI1O14645 258 aaPredicted RBP3.03□□□□□ -1.92
LIMA1-208ENST00000551691 NBR2O15453 112 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 RAMP1O60894 148 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 GLSO94925 669 aaPredicted RBP3.03□□□□□ -1.92
LIMA1-208ENST00000551691 EPPINO95925 133 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 IGLV1-44P01699 117 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 IGHG3P01860 377 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 TPM1P09493 284 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 FREM3P0C091 2139 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 ZNF26P17031 533 aaPredicted RBP3.03□□□□□ -1.92
LIMA1-208ENST00000551691 CRYGSP22914 178 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 ANOS1P23352 680 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 FGF9P31371 208 aaPredicted RBP3.03□□□□□ -1.92
LIMA1-208ENST00000551691 SRP14P37108 136 aaKnown RBP3.03□□□□□ -1.92
LIMA1-208ENST00000551691 NUP62P37198 522 aaPredicted RBP3.03□□□□□ -1.92
LIMA1-208ENST00000551691 SLC26A3P40879 764 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 SLCO1A2P46721 670 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 P2RY1P47900 373 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 PKNOX1P55347 436 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 TPI1P60174 286 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 RND3P61587 244 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 RPL8P62917 257 aaKnown RBP3.03□□□□□ -1.92
LIMA1-208ENST00000551691 ASPHQ12797 758 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 IL18R1Q13478 541 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 CUL1Q13616 776 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 ZNF146Q15072 292 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 SIX1Q15475 284 aaPredicted RBP3.03□□□□□ -1.92
LIMA1-208ENST00000551691 TGFBIQ15582 683 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 CYP51A1Q16850 503 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 KRTAP27-1Q3LI81 207 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 WDR59Q6PJI9 974 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 GDPGP1Q6ZNW5 385 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 LRRC74BQ6ZQY2 392 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 Q6ZRP5 223 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 PRSS48Q7RTY5 328 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 NT5DC3Q86UY8 548 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 OR2M7Q8NG81 312 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 OR2L2Q8NH16 312 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 NPRL2Q8WTW4 380 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 DNAJA4Q8WW22 397 aaPredicted RBP3.03□□□□□ -1.92
LIMA1-208ENST00000551691 RAPGEF5Q92565 580 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 C9orf85Q96MD7 179 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 ATF6BQ99941 703 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 SELENOSQ9BQE4 189 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 RBM4Q9BWF3 364 aaKnown RBP3.03□□□□□ -1.92
LIMA1-208ENST00000551691 OCR1Q9BZK8 76 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 CHRNA10Q9GZZ6 450 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 ZNF385DQ9H6B1 395 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 TRIM45Q9H8W5 580 aaPredicted RBP3.03□□□□□ -1.92
LIMA1-208ENST00000551691 ZNF556Q9HAH1 456 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 IL26Q9NPH9 171 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 EXOSC3Q9NQT5 275 aaKnown RBP3.03□□□□□ -1.92
LIMA1-208ENST00000551691 PITPNC1Q9UKF7 332 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 KLF13Q9Y2Y9 288 aaPredicted RBP3.03□□□□□ -1.92
LIMA1-208ENST00000551691 N6AMT1Q9Y5N5 214 aa3.03□□□□□ -1.92
LIMA1-208ENST00000551691 SCN3AQ9NY46 2000 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 TRGV5A0A0B4J1U4 118 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 A8MUA0 341 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 A8MXK9 166 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 FAM25EA8MYX2 175 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 SUPT3HB4E1H0 165 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 TAPBPO15533 448 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 RS1O15537 224 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 PSTPIP1O43586 416 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 EFNA2O43921 213 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 LY6HO94772 140 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 DUS4LO95620 317 aaKnown RBP3.02□□□□□ -1.93
LIMA1-208ENST00000551691 CD8AP01732 235 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 WNT2P09544 360 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 ETS2P15036 469 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 SDC4P31431 198 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 IFNA8P32881 189 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 PCK1P35558 622 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 TIMP3P35625 211 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 DNASE1L1P49184 302 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 POU3F4P49335 361 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 LOXL1Q08397 574 aaPredicted RBP3.02□□□□□ -1.93
LIMA1-208ENST00000551691 LAGE3Q14657 143 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 STK38Q15208 465 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 MICAQ29983 383 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 MARC1Q5VT66 337 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 CLEC2AQ6UVW9 174 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 FAM151BQ6UXP7 276 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 HSDL2Q6YN16 418 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 C19orf35Q6ZS72 473 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 Q6ZTC4 211 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 TMUB2Q71RG4 321 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 PRSS41Q7RTY9 318 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 DHDDSQ86SQ9 333 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 SMIM29Q86T20 159 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 SERPINA9Q86WD7 417 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 CARM1Q86X55 608 aa3.02□□□□□ -1.93
LIMA1-208ENST00000551691 CYP4Z2PQ8N1L4 340 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms