RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 SLC35D2Q76EJ3 337 aa5.57□□□□□ -1.52
DEPDC4-210ENST00000551642 HDDC2Q7Z4H3 204 aa5.57□□□□□ -1.52
DEPDC4-210ENST00000551642 GALNT5Q7Z7M9 940 aa5.57□□□□□ -1.52
DEPDC4-210ENST00000551642 GPAT4Q86UL3 456 aa5.57□□□□□ -1.52
DEPDC4-210ENST00000551642 TUSC5Q8IXB3 177 aa5.57□□□□□ -1.52
DEPDC4-210ENST00000551642 OR2T33Q8NG76 320 aa5.57□□□□□ -1.52
DEPDC4-210ENST00000551642 OR52L1Q8NGH7 329 aa5.57□□□□□ -1.52
DEPDC4-210ENST00000551642 OR8D4Q8NGM9 314 aa5.57□□□□□ -1.52
DEPDC4-210ENST00000551642 OR6K3Q8NGY3 331 aa5.57□□□□□ -1.52
DEPDC4-210ENST00000551642 TEX47Q8TBZ9 253 aa5.57□□□□□ -1.52
DEPDC4-210ENST00000551642 SPSB4Q96A44 273 aa5.57□□□□□ -1.52
DEPDC4-210ENST00000551642 SAMD8Q96LT4 415 aa5.57□□□□□ -1.52
DEPDC4-210ENST00000551642 ADAD1Q96M93 576 aaKnown RBP5.57□□□□□ -1.52
DEPDC4-210ENST00000551642 KATNB1Q9BVA0 655 aa5.57□□□□□ -1.52
DEPDC4-210ENST00000551642 SFXN3Q9BWM7 321 aa5.57□□□□□ -1.52
DEPDC4-210ENST00000551642 RBM24Q9BX46 236 aaKnown RBP5.57□□□□□ -1.52
DEPDC4-210ENST00000551642 VCXQ9H320 206 aa5.57□□□□□ -1.52
DEPDC4-210ENST00000551642 VCX3BQ9H321 246 aa5.57□□□□□ -1.52
DEPDC4-210ENST00000551642 TXNIPQ9H3M7 391 aa5.57□□□□□ -1.52
DEPDC4-210ENST00000551642 EGLN3Q9H6Z9 239 aa5.57□□□□□ -1.52
DEPDC4-210ENST00000551642 SLC25A19Q9HC21 320 aa5.57□□□□□ -1.52
DEPDC4-210ENST00000551642 PLSCR4Q9NRQ2 329 aa5.57□□□□□ -1.52
DEPDC4-210ENST00000551642 LAMP3Q9UQV4 416 aa5.57□□□□□ -1.52
DEPDC4-210ENST00000551642 RCE1Q9Y256 329 aa5.57□□□□□ -1.52
DEPDC4-210ENST00000551642 ORC6Q9Y5N6 252 aa5.57□□□□□ -1.52
DEPDC4-210ENST00000551642 A6NIZ1 184 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 OR6C65A6NJZ3 312 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 H3BN98 237 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 DLGAP1O14490 977 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 AHCYL1O43865 530 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 MITFO75030 526 aaPredicted RBP5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 TMCC2O75069 709 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 MRPL33O75394 65 aaKnown RBP5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 BCL10O95999 233 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 IGKV2-30P06310 120 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 IGFBP1P08833 259 aaPredicted RBP5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 ACADSP16219 412 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 GRK5P34947 590 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 OPRM1P35372 400 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 OR3A2P47893 321 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 PTDSS1P48651 473 aaKnown RBP5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 RPS6KA3P51812 740 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 CLDN17P56750 224 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 RAP1BP61224 184 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 RAP1AP62834 184 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 IL1RL1Q01638 556 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 LRRC36Q1X8D7 754 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 VAX1Q5SQQ9 334 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 PTCHD4Q6ZW05 846 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 LUZP2Q86TE4 346 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 IGFN1Q86VF2 1251 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 TMEM123Q8N131 208 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 OR6X1Q8NH79 312 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 ZNF519Q8TB69 540 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 FNDC8Q8TC99 324 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 FAM216AQ8WUB2 273 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 INTS12Q96CB8 462 aaKnown RBP5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 STARD4Q96DR4 205 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 SLC25A44Q96H78 314 aaPredicted RBP5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 LRR1Q96L50 414 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 Q96M85 177 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 ZNF570Q96NI8 536 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 ZNF385AQ96PM9 386 aaKnown RBP5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 TSPAN32Q96QS1 320 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 OR2M2Q96R28 347 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 TSSK6Q9BXA6 273 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 MRPL13Q9BYD1 178 aaKnown RBP5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 LINC00470Q9BZP3 86 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 TBC1D23Q9NUY8 699 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 MED29Q9NX70 200 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 SMPD3Q9NY59 655 aaPredicted RBP5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 GRHPRQ9UBQ7 328 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 IL20RAQ9UHF4 553 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 ZNF346Q9UL40 294 aaKnown RBP5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 KCNS2Q9ULS6 477 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 NOSIPQ9Y314 301 aaKnown RBP5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 ADAM18Q9Y3Q7 739 aa5.56□□□□□ -1.52
DEPDC4-210ENST00000551642 LOC102723971A0A1B0GUV8 181 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 ZNF726A6NNF4 738 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 H0YAE9 185 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 SURF4O15260 269 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 TRMUO75648 421 aaKnown RBP5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 PPP1R3DO95685 299 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 SNAP29O95721 258 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 CGAP01215 116 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 IGHG1P01857 330 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 HMGN1P05114 100 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 SOD3P08294 240 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 PGA4P0DJD7 388 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 PGA3P0DJD8 388 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 POU1F1P28069 291 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 EPHA2P29317 976 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 CCKARP32238 428 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 VHLP40337 213 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 PCYT1AP49585 367 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 ZNF133P52736 654 aaPredicted RBP5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 BIDP55957 195 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 TIRAPP58753 221 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 ERVK-25P63136 954 aa5.55□□□□□ -1.52
DEPDC4-210ENST00000551642 EFNB1P98172 346 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms