RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 TMEM205Q6UW68 189 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 KIRREL2Q6UWL6 708 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 SERPINA13PQ6UXR4 307 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 GDPD4Q6W3E5 623 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 STAC2Q6ZMT1 411 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 Q6ZRG5 221 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 C16orf59Q7L2K0 433 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 NUFIP2Q7Z417 695 aaKnown RBP4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 COMMD6Q7Z4G1 85 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 CENPVQ7Z7K6 275 aaPredicted RBP4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 LINC01551Q86U37 167 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 MAML2Q8IZL2 1156 aaPredicted RBP4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 NXPE1Q8N323 547 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 D2HGDHQ8N465 521 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 FRMD1Q8N878 549 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 OR10H4Q8NGA5 316 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 OR51A2Q8NGJ7 313 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 OR13C2Q8NGS9 318 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 OR2A12Q8NGT7 310 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 OR2T27Q8NH04 317 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 OR4C6Q8NH72 309 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 SLC25A43Q8WUT9 341 aaPredicted RBP4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 DNAJB3Q8WWF6 145 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 MS4A6EQ96DS6 147 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 RSPRY1Q96DX4 576 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 KTI12Q96EK9 354 aaPredicted RBP4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 SEC22AQ96IW7 307 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 OR14A2Q96R54 314 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 PRSS27Q9BQR3 290 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 GINS3Q9BRX5 216 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 MENTQ9BUN1 341 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 ANGPTL4Q9BY76 406 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 POTEKPQ9BYX7 375 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 CST11Q9H112 138 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 MAGEH1Q9H213 219 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 IL26Q9NPH9 171 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 ARL15Q9NXU5 204 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 SEMA5BQ9P283 1151 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 CHRNA9Q9UGM1 479 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 IL17BQ9UHF5 180 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 FBXO4Q9UKT5 387 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 ANAPC10Q9UM13 185 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 SRPK3Q9UPE1 567 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 FARSAQ9Y285 508 aaKnown RBP4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 PRKAB1Q9Y478 270 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 THSD7BQ9C0I4 1608 aa4.72□□□□□ -1.65
LSM3P2-201ENST00000551246 CHD5Q8TDI0 1954 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 LOC105371242A0A075B767 164 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 A0A087WZY1 265 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 A6NIZ1 184 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 A6NNC1 897 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 TMEM238C9JI98 176 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 M0QZQ0 153 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 M0R036 132 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 PEX12O00623 359 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 CDC42EP2O14613 210 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 CCSO14618 274 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 SRPX2O60687 465 aaPredicted RBP4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 ZNF354AO60765 605 aaPredicted RBP4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 RAMP1O60894 148 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 DFFBO76075 338 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 RPP14O95059 124 aaKnown RBP4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 ZFPL1O95159 310 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 NDUFB8O95169 186 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 NTN1O95631 604 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 SNAI1O95863 264 aaPredicted RBP4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 ABHD16AO95870 558 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 TBX6O95947 436 aaPredicted RBP4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 CH25HO95992 272 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 HPRT1P00492 218 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 TRGC2P03986 189 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 RPLP2P05387 115 aaKnown RBP4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 CHRM2P08172 466 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 SRP19P09132 144 aaKnown RBP4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 OR4A8P0C604 315 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 NBEAP1P0C6P0 100 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 SLC35G4P0C7Q5 338 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 ELFN1P0C7U0 828 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 C1QTNF9P0C862 333 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 ZNF888P0CJ79 500 aaPredicted RBP4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 LIPCP11150 499 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 EPHA8P29322 1005 aaPredicted RBP4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 GALNSP34059 522 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 ID4P47928 161 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 ARRB1P49407 418 aaPredicted RBP4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 GPR15P49685 360 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 DIO1P49895 249 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 EFNB2P52799 333 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 BACE1P56817 501 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 ACTBP60709 375 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 RPS13P62277 151 aaKnown RBP4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 ACTA2P62736 377 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 ACTG1P63261 375 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 ACTG2P63267 376 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 B4GALNT1Q00973 533 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 LTBQ06643 244 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 DMWDQ09019 674 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 DUSP8Q13202 625 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 FHL1Q13642 323 aa4.71□□□□□ -1.66
LSM3P2-201ENST00000551246 ATXN7L3Q14CW9 347 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms