RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 GAPDHP04406 335 aaKnown RBP4.01□□□□□ -1.77
CPSF6-206ENST00000550987 CRYGBP07316 175 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 IGLL1P15814 213 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 KITLGP21583 273 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 SHMT2P34897 504 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 MDH2P40926 338 aaKnown RBP4.01□□□□□ -1.77
CPSF6-206ENST00000550987 PTGDSP41222 190 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 CCR2P41597 374 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 TSPAN5P62079 268 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 RPS14P62263 151 aaKnown RBP4.01□□□□□ -1.77
CPSF6-206ENST00000550987 XRCC4Q13426 336 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 GNMTQ14749 295 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 FCN2Q15485 313 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 PSMD5Q16401 504 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 Q1RN00 199 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 CARD16Q5EG05 197 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 SLC8B1Q6J4K2 584 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 KRTAP7-1Q8IUC3 87 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 TPRX1Q8N7U7 411 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 PYROXD1Q8WU10 500 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 NEIL2Q969S2 332 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 CNPY3Q9BT09 278 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 RNF126Q9BV68 326 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 ILKAPQ9H0C8 392 aaPredicted RBP4.01□□□□□ -1.77
CPSF6-206ENST00000550987 DNTTIP1Q9H147 329 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 Q9H3A6 140 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 AUNIPQ9H7T9 357 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 APOBEC3BQ9UH17 382 aaKnown RBP4.01□□□□□ -1.77
CPSF6-206ENST00000550987 STARD10Q9Y365 291 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 HES2Q9Y543 173 aa4.01□□□□□ -1.77
CPSF6-206ENST00000550987 MYH9P35579 1960 aaKnown RBP4.01□□□□□ -1.77
CPSF6-206ENST00000550987 TP53BP1Q12888 1972 aaPredicted RBP4□□□□□ -1.77
CPSF6-206ENST00000550987 IGLV3-22A0A075B6J6 115 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 IQCF5A8MTL0 148 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 LYPLA1O75608 230 aaPredicted RBP4□□□□□ -1.77
CPSF6-206ENST00000550987 CDK14O94921 469 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 OR5F1O95221 314 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 TGM6O95932 706 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 KPNA2P52292 529 aaKnown RBP4□□□□□ -1.77
CPSF6-206ENST00000550987 CLDN8P56748 225 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 LIPEQ05469 1076 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 MERTKQ12866 999 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 ZNF77Q15935 545 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 C15orf32Q32M92 178 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 HNRNPA1L2Q32P51 320 aaKnown RBP4□□□□□ -1.77
CPSF6-206ENST00000550987 PARP15Q460N3 678 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 HSP90AA4PQ58FG1 418 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 VAX1Q5SQQ9 334 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 RNLSQ5VYX0 342 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 TIGD3Q6B0B8 471 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 GTSCR1Q86UQ5 136 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 VRK2Q86Y07 508 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 STX12Q86Y82 276 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 CDKL3Q8IVW4 592 aaPredicted RBP4□□□□□ -1.77
CPSF6-206ENST00000550987 MFSD6LQ8IWD5 586 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 SKA3Q8IX90 412 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4□□□□□ -1.77
CPSF6-206ENST00000550987 ZNF485Q8NCK3 441 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 ANGPTL6Q8NI99 470 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 LKAAEAR1Q8TD35 194 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 ASZ1Q8WWH4 475 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 SMARCD2Q92925 531 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 SLC38A4Q969I6 547 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 TM4SF19Q96DZ7 209 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 OXGR1Q96P68 337 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 ATOH8Q96SQ7 321 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 MBOAT4Q96T53 435 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 KLHDC3Q9BQ90 382 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 C20orf24Q9BUV8 137 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 BLZF1Q9H2G9 400 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 RGCCQ9H4X1 137 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 ZNF160Q9HCG1 818 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 KCNIP1Q9NZI2 227 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 GCNT4Q9P109 453 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 B4GALT7Q9UBV7 327 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 DCDC2Q9UHG0 476 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 V9GY05 133 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 COL27A1Q8IZC6 1860 aaPredicted RBP4□□□□□ -1.77
CPSF6-206ENST00000550987 POLEQ07864 2286 aa4□□□□□ -1.77
CPSF6-206ENST00000550987 TDRD15B5MCY1 1934 aaKnown RBP3.99□□□□□ -1.77
CPSF6-206ENST00000550987 IGHV7-81A0A0B4J1V7 117 aa3.99□□□□□ -1.77
CPSF6-206ENST00000550987 A0A1W2PPE3 182 aa3.99□□□□□ -1.77
CPSF6-206ENST00000550987 SMCO2A6NFE2 343 aa3.99□□□□□ -1.77
CPSF6-206ENST00000550987 OR2AG2A6NM03 316 aa3.99□□□□□ -1.77
CPSF6-206ENST00000550987 SRRM5B3KS81 715 aa3.99□□□□□ -1.77
CPSF6-206ENST00000550987 SUPT3HB4E1H0 165 aa3.99□□□□□ -1.77
CPSF6-206ENST00000550987 LOC110117498-PIK3R3F6TDL0 507 aa3.99□□□□□ -1.77
CPSF6-206ENST00000550987 GFYI3L273 518 aa3.99□□□□□ -1.77
CPSF6-206ENST00000550987 MYO1DO94832 1006 aa3.99□□□□□ -1.77
CPSF6-206ENST00000550987 THY1P04216 161 aa3.99□□□□□ -1.77
CPSF6-206ENST00000550987 PLEKP08567 350 aaPredicted RBP3.99□□□□□ -1.77
CPSF6-206ENST00000550987 STAG3L2P0CL84 134 aa3.99□□□□□ -1.77
CPSF6-206ENST00000550987 OR8G3PP0DMU2 310 aa3.99□□□□□ -1.77
CPSF6-206ENST00000550987 PTNP21246 168 aa3.99□□□□□ -1.77
CPSF6-206ENST00000550987 RWDD2BP57060 319 aa3.99□□□□□ -1.77
CPSF6-206ENST00000550987 MYL6P60660 151 aa3.99□□□□□ -1.77
CPSF6-206ENST00000550987 LMO4P61968 165 aa3.99□□□□□ -1.77
CPSF6-206ENST00000550987 PRR4Q16378 134 aa3.99□□□□□ -1.77
CPSF6-206ENST00000550987 ZNF829Q3KNS6 432 aaPredicted RBP3.99□□□□□ -1.77
CPSF6-206ENST00000550987 HHATQ5VTY9 493 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms