RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 ERMAPQ96PL5 475 aaPredicted RBP17.22■□□□□ 0.35
CACNB3-218ENST00000550771 PITX2Q99697 317 aa17.22■□□□□ 0.35
CACNB3-218ENST00000550771 FUZQ9BT04 418 aa17.22■□□□□ 0.35
CACNB3-218ENST00000550771 CCDC134Q9H6E4 229 aa17.22■□□□□ 0.35
CACNB3-218ENST00000550771 SRA1Q9HD15 236 aaKnown RBP17.22■□□□□ 0.35
CACNB3-218ENST00000550771 MEGF8Q7Z7M0 2845 aa17.21■□□□□ 0.35
CACNB3-218ENST00000550771 A0A1B0GUS0 222 aa17.21■□□□□ 0.35
CACNB3-218ENST00000550771 MDFIC2A0A1B0GVS7 189 aa17.21■□□□□ 0.35
CACNB3-218ENST00000550771 SRRM5B3KS81 715 aa17.21■□□□□ 0.35
CACNB3-218ENST00000550771 F5H5K5 113 aa17.21■□□□□ 0.35
CACNB3-218ENST00000550771 HOXA3O43365 443 aaPredicted RBP17.21■□□□□ 0.35
CACNB3-218ENST00000550771 RENP00797 406 aa17.21■□□□□ 0.35
CACNB3-218ENST00000550771 MDKP21741 143 aaPredicted RBP17.21■□□□□ 0.35
CACNB3-218ENST00000550771 PSMB10P40306 273 aa17.21■□□□□ 0.35
CACNB3-218ENST00000550771 RAD23AP54725 363 aa17.21■□□□□ 0.35
CACNB3-218ENST00000550771 MALLQ13021 153 aa17.21■□□□□ 0.35
CACNB3-218ENST00000550771 DEFB112Q30KQ8 113 aa17.21■□□□□ 0.35
CACNB3-218ENST00000550771 SLC36A3Q495N2 470 aa17.21■□□□□ 0.35
CACNB3-218ENST00000550771 ZNF841Q6ZN19 808 aa17.21■□□□□ 0.35
CACNB3-218ENST00000550771 CFAP77Q6ZQR2 320 aa17.21■□□□□ 0.35
CACNB3-218ENST00000550771 ZBTB46Q86UZ6 589 aa17.21■□□□□ 0.35
CACNB3-218ENST00000550771 TAF15Q92804 592 aaKnown RBP eCLIP17.21■□□□□ 0.35
CACNB3-218ENST00000550771 ZDHHC16Q969W1 377 aa17.21■□□□□ 0.35
CACNB3-218ENST00000550771 NMNAT3Q96T66 252 aa17.21■□□□□ 0.35
CACNB3-218ENST00000550771 ATF6BQ99941 703 aa17.21■□□□□ 0.35
CACNB3-218ENST00000550771 NOX4Q9NPH5 578 aa17.21■□□□□ 0.35
CACNB3-218ENST00000550771 DCAF13Q9NV06 445 aaKnown RBP17.21■□□□□ 0.35
CACNB3-218ENST00000550771 CYB5R1Q9UHQ9 305 aa17.21■□□□□ 0.35
CACNB3-218ENST00000550771 SAMD4AQ9UPU9 718 aaKnown RBP17.21■□□□□ 0.35
CACNB3-218ENST00000550771 ENSAO43768 121 aaKnown RBP17.2■□□□□ 0.34
CACNB3-218ENST00000550771 SLC6A6P31641 620 aa17.2■□□□□ 0.34
CACNB3-218ENST00000550771 NPY4RP50391 375 aa17.2■□□□□ 0.34
CACNB3-218ENST00000550771 NUDT2P50583 147 aa17.2■□□□□ 0.34
CACNB3-218ENST00000550771 FGF12P61328 243 aa17.2■□□□□ 0.34
CACNB3-218ENST00000550771 KRT72Q14CN4 511 aa17.2■□□□□ 0.34
CACNB3-218ENST00000550771 KCNJ8Q15842 424 aa17.2■□□□□ 0.34
CACNB3-218ENST00000550771 CLEC12AQ5QGZ9 265 aa17.2■□□□□ 0.34
CACNB3-218ENST00000550771 ZNF362Q5T0B9 420 aaPredicted RBP17.2■□□□□ 0.34
CACNB3-218ENST00000550771 GPR157Q5UAW9 335 aa17.2■□□□□ 0.34
CACNB3-218ENST00000550771 LYPD2Q6UXB3 125 aa17.2■□□□□ 0.34
CACNB3-218ENST00000550771 BRD3OSQ6XYD6 125 aa17.2■□□□□ 0.34
CACNB3-218ENST00000550771 OR52J3Q8NH60 311 aa17.2■□□□□ 0.34
CACNB3-218ENST00000550771 FANK1Q8TC84 345 aa17.2■□□□□ 0.34
CACNB3-218ENST00000550771 CDADC1Q9BWV3 514 aa17.2■□□□□ 0.34
CACNB3-218ENST00000550771 SLC22A4Q9H015 551 aa17.2■□□□□ 0.34
CACNB3-218ENST00000550771 OR52D1Q9H346 318 aa17.2■□□□□ 0.34
CACNB3-218ENST00000550771 PNRC2Q9NPJ4 139 aaKnown RBP17.2■□□□□ 0.34
CACNB3-218ENST00000550771 NOP16Q9Y3C1 178 aaKnown RBP17.2■□□□□ 0.34
CACNB3-218ENST00000550771 C22orf46C9J442 243 aa17.19■□□□□ 0.34
CACNB3-218ENST00000550771 FAM20BO75063 409 aa17.19■□□□□ 0.34
CACNB3-218ENST00000550771 DIRAS1O95057 198 aa17.19■□□□□ 0.34
CACNB3-218ENST00000550771 LCATP04180 440 aa17.19■□□□□ 0.34
CACNB3-218ENST00000550771 HIST1H1CP16403 213 aaKnown RBP17.19■□□□□ 0.34
CACNB3-218ENST00000550771 GGT2P36268 569 aa17.19■□□□□ 0.34
CACNB3-218ENST00000550771 PRSS12P56730 875 aa17.19■□□□□ 0.34
CACNB3-218ENST00000550771 SMIM11AP58511 58 aa17.19■□□□□ 0.34
CACNB3-218ENST00000550771 TRAP1Q12931 704 aaKnown RBP17.19■□□□□ 0.34
CACNB3-218ENST00000550771 OCLNQ16625 522 aa17.19■□□□□ 0.34
CACNB3-218ENST00000550771 GLYATQ6IB77 296 aa17.19■□□□□ 0.34
CACNB3-218ENST00000550771 PGAP1Q75T13 922 aa17.19■□□□□ 0.34
CACNB3-218ENST00000550771 LINC00346Q8IVM7 164 aa17.19■□□□□ 0.34
CACNB3-218ENST00000550771 OR2AJ1Q8NGZ0 328 aa17.19■□□□□ 0.34
CACNB3-218ENST00000550771 OR4K13Q8NH42 304 aa17.19■□□□□ 0.34
CACNB3-218ENST00000550771 SPRYD4Q8WW59 207 aaPredicted RBP17.19■□□□□ 0.34
CACNB3-218ENST00000550771 SLCO4A1Q96BD0 722 aa17.19■□□□□ 0.34
CACNB3-218ENST00000550771 RPRD1BQ9NQG5 326 aaKnown RBP17.19■□□□□ 0.34
CACNB3-218ENST00000550771 TMCC3Q9ULS5 477 aa17.19■□□□□ 0.34
CACNB3-218ENST00000550771 DOCK11Q5JSL3 2073 aa17.19■□□□□ 0.34
CACNB3-218ENST00000550771 PTBP3O95758 552 aaKnown RBP17.18■□□□□ 0.34
CACNB3-218ENST00000550771 LIPFP07098 398 aa17.18■□□□□ 0.34
CACNB3-218ENST00000550771 OMGP23515 440 aa17.18■□□□□ 0.34
CACNB3-218ENST00000550771 PSME3P61289 254 aa17.18■□□□□ 0.34
CACNB3-218ENST00000550771 PDLIM3Q53GG5 364 aaPredicted RBP17.18■□□□□ 0.34
CACNB3-218ENST00000550771 CD276Q5ZPR3 534 aa17.18■□□□□ 0.34
CACNB3-218ENST00000550771 Q6YL49 198 aa17.18■□□□□ 0.34
CACNB3-218ENST00000550771 NAA40Q86UY6 237 aa17.18■□□□□ 0.34
CACNB3-218ENST00000550771 TMEM86BQ8N661 226 aa17.18■□□□□ 0.34
CACNB3-218ENST00000550771 PLPP7Q8NBV4 271 aa17.18■□□□□ 0.34
CACNB3-218ENST00000550771 OR4F5Q8NH21 305 aa17.18■□□□□ 0.34
CACNB3-218ENST00000550771 FN3KRPQ9HA64 309 aa17.18■□□□□ 0.34
CACNB3-218ENST00000550771 KCNG2Q9UJ96 466 aa17.18■□□□□ 0.34
CACNB3-218ENST00000550771 FAM181BA6NEQ2 426 aa17.17■□□□□ 0.34
CACNB3-218ENST00000550771 P2RY10O00398 339 aa17.17■□□□□ 0.34
CACNB3-218ENST00000550771 IDH3BO43837 385 aa17.17■□□□□ 0.34
CACNB3-218ENST00000550771 CRYBA1P05813 215 aa17.17■□□□□ 0.34
CACNB3-218ENST00000550771 NOS3P29474 1203 aa17.17■□□□□ 0.34
CACNB3-218ENST00000550771 TPTEP56180 551 aa17.17■□□□□ 0.34
CACNB3-218ENST00000550771 DEFA6Q01524 100 aa17.17■□□□□ 0.34
CACNB3-218ENST00000550771 MPPED2Q15777 294 aa17.17■□□□□ 0.34
CACNB3-218ENST00000550771 PRAMEF6Q5VXH4 476 aa17.17■□□□□ 0.34
CACNB3-218ENST00000550771 MRPL21Q7Z2W9 205 aaKnown RBP17.17■□□□□ 0.34
CACNB3-218ENST00000550771 FAM86B1Q8N7N1 296 aa17.17■□□□□ 0.34
CACNB3-218ENST00000550771 FAM71F1Q96KD3 344 aaPredicted RBP17.17■□□□□ 0.34
CACNB3-218ENST00000550771 IFT27Q9BW83 186 aa17.17■□□□□ 0.34
CACNB3-218ENST00000550771 BEX1Q9HBH7 125 aa17.17■□□□□ 0.34
CACNB3-218ENST00000550771 SPAG4Q9NPE6 437 aa17.17■□□□□ 0.34
CACNB3-218ENST00000550771 UFSP2Q9NUQ7 469 aa17.17■□□□□ 0.34
CACNB3-218ENST00000550771 KIF17Q9P2E2 1029 aa17.17■□□□□ 0.34
CACNB3-218ENST00000550771 ERVK-18Q9QC07 812 aa17.17■□□□□ 0.34
CACNB3-218ENST00000550771 RNF7Q9UBF6 113 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms