RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 CAPN7Q9Y6W3 813 aa11.3□□□□□ -0.6
TROAP-211ENST00000549891 CLPSL1A2RUU4 121 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 ZNF879B4DU55 563 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 TNFRSF13BO14836 293 aaPredicted RBP11.29□□□□□ -0.6
TROAP-211ENST00000549891 TOX4O94842 621 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 TXNDC12O95881 172 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 SERPINA1P01009 418 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 H1F0P07305 194 aaKnown RBP11.29□□□□□ -0.6
TROAP-211ENST00000549891 CFHR2P36980 270 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 PMELP40967 661 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 LIPEQ05469 1076 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 MAB21L1Q13394 359 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 GK2Q14410 553 aaPredicted RBP11.29□□□□□ -0.6
TROAP-211ENST00000549891 SLC36A3Q495N2 470 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 FGD3Q5JSP0 725 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 LYPD2Q6UXB3 125 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 ZNF841Q6ZN19 808 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 ZNF620Q6ZNG0 422 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 PTCHD4Q6ZW05 846 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 HDXQ7Z353 690 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.29□□□□□ -0.6
TROAP-211ENST00000549891 PNLDC1Q8NA58 520 aaKnown RBP11.29□□□□□ -0.6
TROAP-211ENST00000549891 OR2AJ1Q8NGZ0 328 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 TBC1D15Q8TC07 691 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 SPRYD4Q8WW59 207 aaPredicted RBP11.29□□□□□ -0.6
TROAP-211ENST00000549891 DYRK2Q92630 601 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 RCN3Q96D15 328 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 RSRC1Q96IZ7 334 aaKnown RBP11.29□□□□□ -0.6
TROAP-211ENST00000549891 PITX2Q99697 317 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 ATF6BQ99941 703 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 CITED1Q99966 193 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 CDADC1Q9BWV3 514 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 CHIAQ9BZP6 476 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 TRIM15Q9C019 465 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 FN3KRPQ9HA64 309 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 CMTM6Q9NX76 183 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 PDP1Q9P0J1 537 aaPredicted RBP11.29□□□□□ -0.6
TROAP-211ENST00000549891 ENPP4Q9Y6X5 453 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 WNK1Q9H4A3 2382 aa11.29□□□□□ -0.6
TROAP-211ENST00000549891 UNC119BA6NIH7 251 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 C22orf46C9J442 243 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 F5H5K5 113 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 NDUFAB1O14561 156 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 IMPA2O14732 288 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 NDUFA2O43678 99 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 FAM20BO75063 409 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 RENP00797 406 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 LCATP04180 440 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 MELTFP08582 738 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 ACSM4P0C7M7 580 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 MDH1P40925 334 aaKnown RBP11.28□□□□□ -0.6
TROAP-211ENST00000549891 CDKN2AP42771 156 aaKnown RBP11.28□□□□□ -0.6
TROAP-211ENST00000549891 OMPP47874 163 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 OR8G1Q15617 311 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 MEP1BQ16820 701 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 CLEC12AQ5QGZ9 265 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 METTL11BQ5VVY1 283 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 CORO6Q6QEF8 472 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 SMARCD3Q6STE5 483 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 PGAP1Q75T13 922 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 MRPL21Q7Z2W9 205 aaKnown RBP11.28□□□□□ -0.6
TROAP-211ENST00000549891 SLC15A3Q8IY34 581 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 PLPP7Q8NBV4 271 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 RP9Q8TA86 221 aaKnown RBP11.28□□□□□ -0.6
TROAP-211ENST00000549891 UBE2FQ969M7 185 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 FAM162AQ96A26 154 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 TSSK2Q96PF2 358 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 ERMAPQ96PL5 475 aaPredicted RBP11.28□□□□□ -0.6
TROAP-211ENST00000549891 HOPXQ9BPY8 73 aaPredicted RBP11.28□□□□□ -0.6
TROAP-211ENST00000549891 VIPAS39Q9H9C1 493 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 UFSP2Q9NUQ7 469 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 ACOXLQ9NUZ1 547 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 RNF7Q9UBF6 113 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 TMCC3Q9ULS5 477 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 B9D1Q9UPM9 204 aa11.28□□□□□ -0.6
TROAP-211ENST00000549891 IGLV1-36A0A0B4J1U3 117 aa11.27□□□□□ -0.61
TROAP-211ENST00000549891 GMDSO60547 372 aa11.27□□□□□ -0.61
TROAP-211ENST00000549891 PPP1R3DO95685 299 aa11.27□□□□□ -0.61
TROAP-211ENST00000549891 SFTPBP07988 381 aa11.27□□□□□ -0.61
TROAP-211ENST00000549891 RHCEP18577 417 aa11.27□□□□□ -0.61
TROAP-211ENST00000549891 TPTEP56180 551 aa11.27□□□□□ -0.61
TROAP-211ENST00000549891 RELBQ01201 579 aa11.27□□□□□ -0.61
TROAP-211ENST00000549891 SRSF4Q08170 494 aaKnown RBP11.27□□□□□ -0.61
TROAP-211ENST00000549891 OR8B8Q15620 311 aa11.27□□□□□ -0.61
TROAP-211ENST00000549891 RSPO1Q2MKA7 263 aaPredicted RBP11.27□□□□□ -0.61
TROAP-211ENST00000549891 C11orf91Q3C1V1 193 aa11.27□□□□□ -0.61
TROAP-211ENST00000549891 KRTAP27-1Q3LI81 207 aa11.27□□□□□ -0.61
TROAP-211ENST00000549891 PRAMEF6Q5VXH4 476 aa11.27□□□□□ -0.61
TROAP-211ENST00000549891 RUSC1-AS1Q66K80 236 aa11.27□□□□□ -0.61
TROAP-211ENST00000549891 SLC18B1Q6NT16 456 aa11.27□□□□□ -0.61
TROAP-211ENST00000549891 C19orf18Q8NEA5 215 aa11.27□□□□□ -0.61
TROAP-211ENST00000549891 SLC26A10Q8NG04 563 aa11.27□□□□□ -0.61
TROAP-211ENST00000549891 SLCO4A1Q96BD0 722 aa11.27□□□□□ -0.61
TROAP-211ENST00000549891 WDFY2Q96P53 400 aa11.27□□□□□ -0.61
TROAP-211ENST00000549891 SRA1Q9HD15 236 aaKnown RBP11.27□□□□□ -0.61
TROAP-211ENST00000549891 FGFR1OP2Q9NVK5 253 aa11.27□□□□□ -0.61
TROAP-211ENST00000549891 RNF114Q9Y508 228 aa11.27□□□□□ -0.61
TROAP-211ENST00000549891 NOTCH1P46531 2555 aa11.26□□□□□ -0.61
TROAP-211ENST00000549891 TRAV38-1A0A0B4J264 116 aa11.26□□□□□ -0.61
TROAP-211ENST00000549891 CENPVL3A0A0U1RRI6 287 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms