RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 CMYA5Q8N3K9 4069 aa11.25□□□□□ -0.61
GCN1-206ENST00000549815 TCRBV5S2A0A599 114 aa11.25□□□□□ -0.61
GCN1-206ENST00000549815 KRT36O76013 467 aa11.25□□□□□ -0.61
GCN1-206ENST00000549815 GASTP01350 101 aa11.25□□□□□ -0.61
GCN1-206ENST00000549815 HLA-DPB1P04440 258 aa11.25□□□□□ -0.61
GCN1-206ENST00000549815 SELEP16581 610 aa11.25□□□□□ -0.61
GCN1-206ENST00000549815 CPT2P23786 658 aa11.25□□□□□ -0.61
GCN1-206ENST00000549815 NOS3P29474 1203 aa11.25□□□□□ -0.61
GCN1-206ENST00000549815 OTX1P32242 354 aaPredicted RBP11.25□□□□□ -0.61
GCN1-206ENST00000549815 GATA4P43694 442 aa11.25□□□□□ -0.61
GCN1-206ENST00000549815 SRP9P49458 86 aaKnown RBP11.25□□□□□ -0.61
GCN1-206ENST00000549815 RAD23AP54725 363 aa11.25□□□□□ -0.61
GCN1-206ENST00000549815 PAX8Q06710 450 aa11.25□□□□□ -0.61
GCN1-206ENST00000549815 CLEC12AQ5QGZ9 265 aa11.25□□□□□ -0.61
GCN1-206ENST00000549815 LYPD4Q6UWN0 246 aa11.25□□□□□ -0.61
GCN1-206ENST00000549815 MOGAT3Q86VF5 341 aa11.25□□□□□ -0.61
GCN1-206ENST00000549815 BPIFB2Q8N4F0 458 aa11.25□□□□□ -0.61
GCN1-206ENST00000549815 BHLHE23Q8NDY6 225 aa11.25□□□□□ -0.61
GCN1-206ENST00000549815 OR2AJ1Q8NGZ0 328 aa11.25□□□□□ -0.61
GCN1-206ENST00000549815 C22orf15Q8WYQ4 148 aa11.25□□□□□ -0.61
GCN1-206ENST00000549815 DACT3Q96B18 629 aaPredicted RBP11.25□□□□□ -0.61
GCN1-206ENST00000549815 CDADC1Q9BWV3 514 aa11.25□□□□□ -0.61
GCN1-206ENST00000549815 HCAR1Q9BXC0 346 aa11.25□□□□□ -0.61
GCN1-206ENST00000549815 DDX28Q9NUL7 540 aaKnown RBP11.25□□□□□ -0.61
GCN1-206ENST00000549815 TMEM100Q9NV29 134 aa11.25□□□□□ -0.61
GCN1-206ENST00000549815 NDE1Q9NXR1 346 aa11.25□□□□□ -0.61
GCN1-206ENST00000549815 ACTR3BQ9P1U1 418 aa11.25□□□□□ -0.61
GCN1-206ENST00000549815 LRCH1Q9Y2L9 728 aa11.25□□□□□ -0.61
GCN1-206ENST00000549815 AUP1Q9Y679 476 aa11.25□□□□□ -0.61
GCN1-206ENST00000549815 DOCK11Q5JSL3 2073 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 IGHV3-64DA0A0J9YX35 117 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 TNFRSF11BO00300 401 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 DCTN3O75935 186 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 ZNF205O95201 554 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 HLA-DQA2P01906 255 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 LCATP04180 440 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 PYCR1P32322 319 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 CD80P33681 288 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 CD200P41217 278 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 RPS27P42677 84 aaKnown RBP11.24□□□□□ -0.61
GCN1-206ENST00000549815 UBA52P62987 128 aaKnown RBP11.24□□□□□ -0.61
GCN1-206ENST00000549815 ACTG1P63261 375 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 PPP1R8Q12972 351 aaKnown RBP11.24□□□□□ -0.61
GCN1-206ENST00000549815 PCK2Q16822 640 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 ZNF404Q494X3 552 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 ESCO2Q56NI9 601 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 FAM201AQ5SY85 155 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 RPL13AP3Q6NVV1 102 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 CYP2R1Q6VVX0 501 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 RASSF6Q6ZTQ3 369 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 DOK3Q7L591 496 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 KLBQ86Z14 1044 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 LINC00471Q8N535 108 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 FITM2Q8N6M3 262 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 CELF2-AS1Q8N7Q2 184 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 CYB561A3Q8NBI2 242 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 SLC37A3Q8NCC5 494 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 OR52L1Q8NGH7 329 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 SLCO4A1Q96BD0 722 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 TMEM246Q9BRR3 403 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 VNN3Q9NY84 501 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 ZNF69Q9UC07 566 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 NUP50Q9UKX7 468 aa11.24□□□□□ -0.61
GCN1-206ENST00000549815 C5orf63A6NC05 138 aa11.23□□□□□ -0.61
GCN1-206ENST00000549815 TVP23AA6NH52 213 aa11.23□□□□□ -0.61
GCN1-206ENST00000549815 M0R135 149 aa11.23□□□□□ -0.61
GCN1-206ENST00000549815 FPR2P25090 351 aa11.23□□□□□ -0.61
GCN1-206ENST00000549815 TPTEP56180 551 aa11.23□□□□□ -0.61
GCN1-206ENST00000549815 SNAI3Q3KNW1 292 aa11.23□□□□□ -0.61
GCN1-206ENST00000549815 ARMCX4Q5H9R4 360 aa11.23□□□□□ -0.61
GCN1-206ENST00000549815 PGAP1Q75T13 922 aa11.23□□□□□ -0.61
GCN1-206ENST00000549815 BCL6BQ8N143 479 aaPredicted RBP11.23□□□□□ -0.61
GCN1-206ENST00000549815 LNX2Q8N448 690 aa11.23□□□□□ -0.61
GCN1-206ENST00000549815 SIGLECL1Q8N7X8 197 aa11.23□□□□□ -0.61
GCN1-206ENST00000549815 OR2T4Q8NH00 348 aa11.23□□□□□ -0.61
GCN1-206ENST00000549815 OR4Q3Q8NH05 313 aa11.23□□□□□ -0.61
GCN1-206ENST00000549815 Q8TCH9 128 aa11.23□□□□□ -0.61
GCN1-206ENST00000549815 ERGIC1Q969X5 290 aa11.23□□□□□ -0.61
GCN1-206ENST00000549815 ZNF799Q96GE5 643 aa11.23□□□□□ -0.61
GCN1-206ENST00000549815 C1orf147Q96MC9 270 aaPredicted RBP11.23□□□□□ -0.61
GCN1-206ENST00000549815 ZNF48Q96MX3 618 aaPredicted RBP11.23□□□□□ -0.61
GCN1-206ENST00000549815 SSBP3Q9BWW4 388 aaPredicted RBP11.23□□□□□ -0.61
GCN1-206ENST00000549815 NMNAT2Q9BZQ4 307 aa11.23□□□□□ -0.61
GCN1-206ENST00000549815 NTN4Q9HB63 628 aa11.23□□□□□ -0.61
GCN1-206ENST00000549815 MIOXQ9UGB7 285 aa11.23□□□□□ -0.61
GCN1-206ENST00000549815 OR5V1Q9UGF6 321 aa11.23□□□□□ -0.61
GCN1-206ENST00000549815 PPIAL4AQ9Y536 164 aa11.23□□□□□ -0.61
GCN1-206ENST00000549815 CCNB2O95067 398 aa11.22□□□□□ -0.61
GCN1-206ENST00000549815 PTBP3O95758 552 aaKnown RBP11.22□□□□□ -0.61
GCN1-206ENST00000549815 PPIAL4GP0DN37 164 aa11.22□□□□□ -0.61
GCN1-206ENST00000549815 RPS2P15880 293 aaKnown RBP11.22□□□□□ -0.61
GCN1-206ENST00000549815 ZNF823P16415 610 aa11.22□□□□□ -0.61
GCN1-206ENST00000549815 MXRA7P84157 204 aa11.22□□□□□ -0.61
GCN1-206ENST00000549815 HOXA4Q00056 320 aaPredicted RBP11.22□□□□□ -0.61
GCN1-206ENST00000549815 MS4A2Q01362 244 aa11.22□□□□□ -0.61
GCN1-206ENST00000549815 ZNF92Q03936 586 aa11.22□□□□□ -0.61
GCN1-206ENST00000549815 MALLQ13021 153 aa11.22□□□□□ -0.61
GCN1-206ENST00000549815 PRAMEF6Q5VXH4 476 aa11.22□□□□□ -0.61
GCN1-206ENST00000549815 LCN8Q6JVE9 175 aa11.22□□□□□ -0.61
GCN1-206ENST00000549815 LYPD2Q6UXB3 125 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms