RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 SPACA3Q8IXA5 215 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 CSNK2A3Q8NEV1 391 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 OR52L1Q8NGH7 329 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 WFDC12Q8WWY7 111 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 PIK3R3Q92569 461 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 KLK6Q92876 244 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 MR1Q95460 341 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 ISOC1Q96CN7 298 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 NRTNQ99748 197 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 SRXN1Q9BYN0 137 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 OSGEPL1Q9H4B0 414 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 TMEM185BQ9H7F4 350 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF556Q9HAH1 456 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 MBNL3Q9NUK0 354 aaKnown RBP4.23□□□□□ -1.73
SCAF11-212ENST00000549162 CHCHD3Q9NX63 227 aaKnown RBP4.23□□□□□ -1.73
SCAF11-212ENST00000549162 GALNT8Q9NY28 637 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 NCDNQ9UBB6 729 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 MEMO1Q9Y316 297 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 GRIP1Q9Y3R0 1128 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 MRPS18BQ9Y676 258 aaKnown RBP4.23□□□□□ -1.73
SCAF11-212ENST00000549162 LOC102723971A0A1B0GUV8 181 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 RNF222A6NCQ9 220 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 OR5B21A6NL26 309 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 AIPO00170 330 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 LRATO95237 230 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 PRG2P13727 222 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 HPGDP15428 266 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 FUT1P19526 365 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 MSR1P21757 451 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 KIR3DL2P43630 455 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 TAS2R41P59536 307 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 PPP3R1P63098 170 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 HSPB3Q12988 150 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 CBX3Q13185 183 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 SRSF5Q13243 272 aaKnown RBP4.22□□□□□ -1.73
SCAF11-212ENST00000549162 ALKBH1Q13686 389 aaKnown RBP4.22□□□□□ -1.73
SCAF11-212ENST00000549162 OR1C1Q15619 314 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 C2orf76Q3KRA6 126 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 RNFT1Q5M7Z0 435 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 CD276Q5ZPR3 534 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 ANKRD26P1Q6NSI1 321 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 TSSK4Q6SA08 328 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 MEX3BQ6ZN04 569 aaKnown RBP4.22□□□□□ -1.73
SCAF11-212ENST00000549162 BEND4Q6ZU67 534 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 LHFPL1Q86WI0 220 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 LDLRAD3Q86YD5 345 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 LURAP1LQ8IV03 231 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 ACBD7Q8N6N7 88 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 C10orf53Q8N6V4 93 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 POC5Q8NA72 575 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 OR5AN1Q8NGI8 311 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 OR5D14Q8NGL3 314 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 HAVCR1Q96D42 359 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 ZG16BQ96DA0 208 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 ZHX1-C8orf76Q96EF9 292 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 SRSF8Q9BRL6 282 aaKnown RBP4.22□□□□□ -1.73
SCAF11-212ENST00000549162 DEFB126Q9BYW3 111 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 KCNN2Q9H2S1 579 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 C11orf1Q9H5F2 150 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 TRPC4Q9UBN4 977 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 DUSP13Q9UII6 198 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF346Q9UL40 294 aaKnown RBP4.22□□□□□ -1.73
SCAF11-212ENST00000549162 A0A0J9YW62 118 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 C7orf66A4D0T2 115 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 OR6C68A6NDL8 312 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 MCIDASD6RGH6 385 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 TSPAN4O14817 238 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 TNFSF15O95150 251 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 RENP00797 406 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 IL5P05113 134 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 P0C879 139 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 KIR2DL2P43627 348 aaPredicted RBP4.22□□□□□ -1.73
SCAF11-212ENST00000549162 GPR176Q14439 515 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 MELKQ14680 651 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 EXOSC7Q15024 291 aaKnown RBP4.22□□□□□ -1.73
SCAF11-212ENST00000549162 ALG10Q5BKT4 473 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 FBXW9Q5XUX1 488 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 TMPRSS11AQ6ZMR5 421 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 SLC35F2Q8IXU6 374 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.22□□□□□ -1.73
SCAF11-212ENST00000549162 OR10G3Q8NGC4 313 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 DOK4Q8TEW6 326 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 PYDC1Q8WXC3 89 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 SDHCQ99643 169 aaPredicted RBP4.22□□□□□ -1.73
SCAF11-212ENST00000549162 PAIP2Q9BPZ3 127 aaKnown RBP4.22□□□□□ -1.73
SCAF11-212ENST00000549162 SLC25A32Q9H2D1 315 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 PPP4R1LQ9P1A2 415 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 AUP1Q9Y679 476 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 A0A1W2PRG6 482 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 OR2W5A6NFC9 320 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 CTDSP2O14595 271 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 AHSA1O95433 338 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 LCATP04180 440 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 IGFBP1P08833 259 aaPredicted RBP4.22□□□□□ -1.73
SCAF11-212ENST00000549162 RPS2P15880 293 aaKnown RBP4.22□□□□□ -1.73
SCAF11-212ENST00000549162 IL7RP16871 459 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 FEN1P39748 380 aaKnown RBP4.22□□□□□ -1.73
SCAF11-212ENST00000549162 MAP2K4P45985 399 aa4.22□□□□□ -1.73
SCAF11-212ENST00000549162 NOVA1P51513 510 aaKnown RBP4.22□□□□□ -1.73
SCAF11-212ENST00000549162 PGDP52209 483 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms