RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 ADI1Q9BV57 179 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 MARCH7Q9H992 704 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 GCM1Q9NP62 436 aa11.29□□□□□ -0.6
CDX2-202ENST00000548877 SAMHD1Q9Y3Z3 626 aaKnown RBP11.29□□□□□ -0.6
CDX2-202ENST00000548877 IGKV1D-43A0A0B4J1Z2 117 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 A0A1W2PRG6 482 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 C5orf63A6NC05 138 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 SLC2A10O95528 541 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 IGF2P01344 180 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 IFNW1P05000 195 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 LYNP07948 512 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 COX5BP10606 129 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 RPS2P15880 293 aaKnown RBP11.28□□□□□ -0.6
CDX2-202ENST00000548877 GSTM3P21266 225 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 DAP3P51398 398 aaKnown RBP11.28□□□□□ -0.6
CDX2-202ENST00000548877 MMP16P51512 607 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 GTF2A1P52655 376 aaPredicted RBP11.28□□□□□ -0.6
CDX2-202ENST00000548877 GNB2P62879 340 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 RPL18Q07020 188 aaKnown RBP11.28□□□□□ -0.6
CDX2-202ENST00000548877 ZNF181Q2M3W8 571 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 BEAN1Q3B7T3 259 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 ENTPD8Q5MY95 495 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 GPR157Q5UAW9 335 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 SLC25A47Q6Q0C1 308 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 ARL9Q6T311 187 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 NANOGNBQ7Z5D8 188 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 VTCN1Q7Z7D3 282 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 SYT9Q86SS6 491 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 C1QL4Q86Z23 238 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 ZNF555Q8NEP9 628 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 OR6T1Q8NGN1 323 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 ADAMTS16Q8TE57 1224 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 SSMEM1Q8WWF3 244 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 LIPHQ8WWY8 451 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 NEIL1Q96FI4 390 aaPredicted RBP11.28□□□□□ -0.6
CDX2-202ENST00000548877 C7orf34Q96L11 122 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 CNBD2Q96M20 576 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 YTHDF1Q9BYJ9 559 aaKnown RBP11.28□□□□□ -0.6
CDX2-202ENST00000548877 MEPEQ9NQ76 525 aaPredicted RBP11.28□□□□□ -0.6
CDX2-202ENST00000548877 ASH2LQ9UBL3 628 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 ENOPH1Q9UHY7 261 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 TIMM10BQ9Y5J6 103 aa11.28□□□□□ -0.6
CDX2-202ENST00000548877 TRAPPC13A5PLN9 417 aa11.27□□□□□ -0.61
CDX2-202ENST00000548877 BLOC1S5-TXNDC5H3BN57 136 aa11.27□□□□□ -0.61
CDX2-202ENST00000548877 M0R3H8 397 aa11.27□□□□□ -0.61
CDX2-202ENST00000548877 F13BP05160 661 aa11.27□□□□□ -0.61
CDX2-202ENST00000548877 NR2C1P13056 603 aa11.27□□□□□ -0.61
CDX2-202ENST00000548877 RHCEP18577 417 aa11.27□□□□□ -0.61
CDX2-202ENST00000548877 MYF6P23409 242 aa11.27□□□□□ -0.61
CDX2-202ENST00000548877 PCBD1P61457 104 aa11.27□□□□□ -0.61
CDX2-202ENST00000548877 ERVK-25P63136 954 aa11.27□□□□□ -0.61
CDX2-202ENST00000548877 SGCAQ16586 387 aa11.27□□□□□ -0.61
CDX2-202ENST00000548877 DUSP7Q16829 419 aa11.27□□□□□ -0.61
CDX2-202ENST00000548877 SLC36A3Q495N2 470 aa11.27□□□□□ -0.61
CDX2-202ENST00000548877 SLC27A4Q6P1M0 643 aa11.27□□□□□ -0.61
CDX2-202ENST00000548877 TSPYL5Q86VY4 417 aaPredicted RBP11.27□□□□□ -0.61
CDX2-202ENST00000548877 GPR32P1Q8NGA4 272 aa11.27□□□□□ -0.61
CDX2-202ENST00000548877 HDAC2Q92769 488 aaKnown RBP11.27□□□□□ -0.61
CDX2-202ENST00000548877 HAVCR1Q96D42 359 aa11.27□□□□□ -0.61
CDX2-202ENST00000548877 OR2V2Q96R30 315 aa11.27□□□□□ -0.61
CDX2-202ENST00000548877 PRSS27Q9BQR3 290 aa11.27□□□□□ -0.61
CDX2-202ENST00000548877 NUDT16L1Q9BRJ7 211 aaKnown RBP11.27□□□□□ -0.61
CDX2-202ENST00000548877 TMEM246Q9BRR3 403 aa11.27□□□□□ -0.61
CDX2-202ENST00000548877 WACQ9BTA9 647 aa11.27□□□□□ -0.61
CDX2-202ENST00000548877 INIPQ9NRY2 104 aa11.27□□□□□ -0.61
CDX2-202ENST00000548877 NDUFAF4Q9P032 175 aa11.27□□□□□ -0.61
CDX2-202ENST00000548877 KIF17Q9P2E2 1029 aa11.27□□□□□ -0.61
CDX2-202ENST00000548877 NDRG4Q9ULP0 352 aaKnown RBP11.27□□□□□ -0.61
CDX2-202ENST00000548877 ENPP4Q9Y6X5 453 aa11.27□□□□□ -0.61
CDX2-202ENST00000548877 PLXNB1O43157 2135 aa11.27□□□□□ -0.61
CDX2-202ENST00000548877 CPSF4LA6NMK7 179 aaKnown RBP11.26□□□□□ -0.61
CDX2-202ENST00000548877 MCIDASD6RGH6 385 aa11.26□□□□□ -0.61
CDX2-202ENST00000548877 LAP3P28838 519 aa11.26□□□□□ -0.61
CDX2-202ENST00000548877 IFNA8P32881 189 aa11.26□□□□□ -0.61
CDX2-202ENST00000548877 CRYBA2P53672 197 aa11.26□□□□□ -0.61
CDX2-202ENST00000548877 FGF12P61328 243 aa11.26□□□□□ -0.61
CDX2-202ENST00000548877 IL18R1Q13478 541 aa11.26□□□□□ -0.61
CDX2-202ENST00000548877 ZNF404Q494X3 552 aa11.26□□□□□ -0.61
CDX2-202ENST00000548877 Q6ZPA2 131 aa11.26□□□□□ -0.61
CDX2-202ENST00000548877 ZSCAN4Q8NAM6 433 aaPredicted RBP11.26□□□□□ -0.61
CDX2-202ENST00000548877 OR4D11Q8NGI4 311 aa11.26□□□□□ -0.61
CDX2-202ENST00000548877 TBC1D15Q8TC07 691 aa11.26□□□□□ -0.61
CDX2-202ENST00000548877 FNDC8Q8TC99 324 aa11.26□□□□□ -0.61
CDX2-202ENST00000548877 CYGBQ8WWM9 190 aa11.26□□□□□ -0.61
CDX2-202ENST00000548877 ALG12Q9BV10 488 aa11.26□□□□□ -0.61
CDX2-202ENST00000548877 POFUT1Q9H488 388 aa11.26□□□□□ -0.61
CDX2-202ENST00000548877 C16orf95Q9H693 158 aa11.26□□□□□ -0.61
CDX2-202ENST00000548877 TCF7L1Q9HCS4 588 aa11.26□□□□□ -0.61
CDX2-202ENST00000548877 SLC7A7Q9UM01 511 aa11.26□□□□□ -0.61
CDX2-202ENST00000548877 ARRDC5A6NEK1 342 aa11.25□□□□□ -0.61
CDX2-202ENST00000548877 TNFRSF11BO00300 401 aa11.25□□□□□ -0.61
CDX2-202ENST00000548877 P2RY10O00398 339 aa11.25□□□□□ -0.61
CDX2-202ENST00000548877 PHYHO14832 338 aa11.25□□□□□ -0.61
CDX2-202ENST00000548877 GPR137BO60478 399 aa11.25□□□□□ -0.61
CDX2-202ENST00000548877 ABHD16AO95870 558 aa11.25□□□□□ -0.61
CDX2-202ENST00000548877 OPN1SWP03999 348 aa11.25□□□□□ -0.61
CDX2-202ENST00000548877 ANXA8P13928 327 aa11.25□□□□□ -0.61
CDX2-202ENST00000548877 FUT1P19526 365 aa11.25□□□□□ -0.61
CDX2-202ENST00000548877 PITPNBP48739 271 aa11.25□□□□□ -0.61
CDX2-202ENST00000548877 FMODQ06828 376 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms