RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 COX5BP10606 129 aa13.75□□□□□ -0.21
SSH1-208ENST00000548522 CTLA4P16410 223 aa13.75□□□□□ -0.21
SSH1-208ENST00000548522 YAP1P46937 504 aaKnown RBP13.75□□□□□ -0.21
SSH1-208ENST00000548522 PRSS12P56730 875 aa13.75□□□□□ -0.21
SSH1-208ENST00000548522 RELBQ01201 579 aa13.75□□□□□ -0.21
SSH1-208ENST00000548522 LRRC23Q53EV4 343 aaPredicted RBP13.75□□□□□ -0.21
SSH1-208ENST00000548522 CYBRD1Q53TN4 286 aa13.75□□□□□ -0.21
SSH1-208ENST00000548522 MESTQ5EB52 335 aa13.75□□□□□ -0.21
SSH1-208ENST00000548522 SYT9Q86SS6 491 aa13.75□□□□□ -0.21
SSH1-208ENST00000548522 MUC20Q8N307 709 aaPredicted RBP13.75□□□□□ -0.21
SSH1-208ENST00000548522 KIR3DL3Q8N743 410 aa13.75□□□□□ -0.21
SSH1-208ENST00000548522 ATG16L2Q8NAA4 619 aa13.75□□□□□ -0.21
SSH1-208ENST00000548522 HAVCR1Q96D42 359 aa13.75□□□□□ -0.21
SSH1-208ENST00000548522 PYURFQ96I23 114 aa13.75□□□□□ -0.21
SSH1-208ENST00000548522 MEGF10Q96KG7 1140 aa13.75□□□□□ -0.21
SSH1-208ENST00000548522 SLC29A1Q99808 456 aa13.75□□□□□ -0.21
SSH1-208ENST00000548522 CDADC1Q9BWV3 514 aa13.75□□□□□ -0.21
SSH1-208ENST00000548522 MARCH7Q9H992 704 aa13.75□□□□□ -0.21
SSH1-208ENST00000548522 USE1Q9NZ43 259 aa13.75□□□□□ -0.21
SSH1-208ENST00000548522 PTTG3PQ9NZH4 202 aa13.75□□□□□ -0.21
SSH1-208ENST00000548522 NDUFA13Q9P0J0 144 aa13.75□□□□□ -0.21
SSH1-208ENST00000548522 A6NIZ1 184 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 J3KTA2 159 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 SOCS2O14508 198 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 MLNRO43193 412 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 PPIAL4GP0DN37 164 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 GUCA1AP43080 201 aaPredicted RBP13.74□□□□□ -0.21
SSH1-208ENST00000548522 RAP1BP61224 184 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 RAP1AP62834 184 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 GNB2P62879 340 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 SCRN3Q0VDG4 424 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 GK3PQ14409 553 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 FAM205BPQ63HN1 556 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 RUSC1-AS1Q66K80 236 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 OR2T2Q6IF00 324 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 BTNL3Q6UXE8 466 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 LRRN1Q6UXK5 716 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 GALNT4Q8N4A0 578 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 CBR4Q8N4T8 237 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 OR10S1Q8NGN2 331 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 FNDC8Q8TC99 324 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 RAB40AQ8WXH6 277 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 TPD52L3Q96J77 140 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 PRRC1Q96M27 445 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 Q96M85 177 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 TMEM246Q9BRR3 403 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 SMPD3Q9NY59 655 aaPredicted RBP13.74□□□□□ -0.21
SSH1-208ENST00000548522 ASH2LQ9UBL3 628 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 IL20RAQ9UHF4 553 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 OAZ3Q9UMX2 235 aa13.74□□□□□ -0.21
SSH1-208ENST00000548522 OR6C6A6NF89 314 aa13.73□□□□□ -0.21
SSH1-208ENST00000548522 F5H5P2 479 aa13.73□□□□□ -0.21
SSH1-208ENST00000548522 CDC42EP2O14613 210 aa13.73□□□□□ -0.21
SSH1-208ENST00000548522 SURF4O15260 269 aa13.73□□□□□ -0.21
SSH1-208ENST00000548522 SEMG1P04279 462 aa13.73□□□□□ -0.21
SSH1-208ENST00000548522 MYF6P23409 242 aa13.73□□□□□ -0.21
SSH1-208ENST00000548522 KDELR2P33947 212 aa13.73□□□□□ -0.21
SSH1-208ENST00000548522 PMELP40967 661 aa13.73□□□□□ -0.21
SSH1-208ENST00000548522 GPR4P46093 362 aa13.73□□□□□ -0.21
SSH1-208ENST00000548522 SLC9A3P48764 834 aa13.73□□□□□ -0.21
SSH1-208ENST00000548522 ALDH3A2P51648 485 aa13.73□□□□□ -0.21
SSH1-208ENST00000548522 KRTAP10-3P60369 221 aa13.73□□□□□ -0.21
SSH1-208ENST00000548522 RFX4Q33E94 735 aa13.73□□□□□ -0.21
SSH1-208ENST00000548522 SLC36A3Q495N2 470 aa13.73□□□□□ -0.21
SSH1-208ENST00000548522 SLC27A4Q6P1M0 643 aa13.73□□□□□ -0.21
SSH1-208ENST00000548522 LYPD2Q6UXB3 125 aa13.73□□□□□ -0.21
SSH1-208ENST00000548522 CBLL1Q75N03 491 aa13.73□□□□□ -0.21
SSH1-208ENST00000548522 OAFQ86UD1 273 aa13.73□□□□□ -0.21
SSH1-208ENST00000548522 MOGAT3Q86VF5 341 aa13.73□□□□□ -0.21
SSH1-208ENST00000548522 BHLHE23Q8NDY6 225 aa13.73□□□□□ -0.21
SSH1-208ENST00000548522 C19orf18Q8NEA5 215 aa13.73□□□□□ -0.21
SSH1-208ENST00000548522 NRBF2Q96F24 287 aa13.73□□□□□ -0.21
SSH1-208ENST00000548522 ADI1Q9BV57 179 aa13.73□□□□□ -0.21
SSH1-208ENST00000548522 YTHDF1Q9BYJ9 559 aaKnown RBP13.73□□□□□ -0.21
SSH1-208ENST00000548522 GABARAPL1Q9H0R8 117 aa13.73□□□□□ -0.21
SSH1-208ENST00000548522 WDR76Q9H967 626 aa13.73□□□□□ -0.21
SSH1-208ENST00000548522 MMP24Q9Y5R2 645 aa13.73□□□□□ -0.21
SSH1-208ENST00000548522 A0A0G2JK05 382 aa13.72□□□□□ -0.21
SSH1-208ENST00000548522 SAC3D1A6NKF1 404 aa13.72□□□□□ -0.21
SSH1-208ENST00000548522 EFCAB9A8MZ26 197 aa13.72□□□□□ -0.21
SSH1-208ENST00000548522 C22orf46C9J442 243 aa13.72□□□□□ -0.21
SSH1-208ENST00000548522 DLGAP1O14490 977 aa13.72□□□□□ -0.21
SSH1-208ENST00000548522 FFAR1O14842 300 aa13.72□□□□□ -0.21
SSH1-208ENST00000548522 SERPINA1P01009 418 aa13.72□□□□□ -0.21
SSH1-208ENST00000548522 KNG1P01042 644 aa13.72□□□□□ -0.21
SSH1-208ENST00000548522 RAC2P15153 192 aa13.72□□□□□ -0.21
SSH1-208ENST00000548522 PITPNBP48739 271 aa13.72□□□□□ -0.21
SSH1-208ENST00000548522 RPS6KA3P51812 740 aa13.72□□□□□ -0.21
SSH1-208ENST00000548522 RAG2P55895 527 aa13.72□□□□□ -0.21
SSH1-208ENST00000548522 FGF12P61328 243 aa13.72□□□□□ -0.21
SSH1-208ENST00000548522 DBPQ10586 325 aaPredicted RBP13.72□□□□□ -0.21
SSH1-208ENST00000548522 ST3GAL3Q11203 375 aa13.72□□□□□ -0.21
SSH1-208ENST00000548522 ZNF404Q494X3 552 aa13.72□□□□□ -0.21
SSH1-208ENST00000548522 CCDC92Q53HC0 331 aaPredicted RBP13.72□□□□□ -0.21
SSH1-208ENST00000548522 FIP1L1Q6UN15 594 aaKnown RBP13.72□□□□□ -0.21
SSH1-208ENST00000548522 RHOUQ7L0Q8 258 aa13.72□□□□□ -0.21
SSH1-208ENST00000548522 ZDHHC13Q8IUH4 622 aa13.72□□□□□ -0.21
SSH1-208ENST00000548522 OR5K1Q8NHB7 308 aa13.72□□□□□ -0.21
SSH1-208ENST00000548522 RASD2Q96D21 266 aa13.72□□□□□ -0.21
SSH1-208ENST00000548522 NEIL1Q96FI4 390 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms