RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 EGLN3Q9H6Z9 239 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 PATZ1Q9HBE1 687 aaKnown RBP5.64□□□□□ -1.51
SCAF11-211ENST00000547950 GCM1Q9NP62 436 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 IL1RAPQ9NPH3 570 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 TMEM100Q9NV29 134 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 TAGLN3Q9UI15 199 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 N6AMT1Q9Y5N5 214 aa5.64□□□□□ -1.51
SCAF11-211ENST00000547950 MALRD1Q5VYJ5 2156 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 TVP23AA6NH52 213 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 B2RBV5 119 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 F5H5P2 479 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 TNFRSF11BO00300 401 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 MLNRO43193 412 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 IDH3BO43837 385 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 KRT36O76013 467 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 GASTP01350 101 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 WNT2P09544 360 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 ACSM4P0C7M7 580 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 SELEP16581 610 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 CFPP27918 469 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 PYCR1P32322 319 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 MDH2P40926 338 aaKnown RBP5.63□□□□□ -1.51
SCAF11-211ENST00000547950 RPS27P42677 84 aaKnown RBP5.63□□□□□ -1.51
SCAF11-211ENST00000547950 GSSP48637 474 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 TPTEP56180 551 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 HIST1H3AP68431 136 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.63□□□□□ -1.51
SCAF11-211ENST00000547950 COX10Q12887 443 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 TSPAN31Q12999 210 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 ECH1Q13011 328 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 MALLQ13021 153 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 ZNF154Q13106 437 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 GK2Q14410 553 aaPredicted RBP5.63□□□□□ -1.51
SCAF11-211ENST00000547950 TMEM155Q4W5P6 130 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 ESCO2Q56NI9 601 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 HIST2H3PS2Q5TEC6 136 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 SLC18B1Q6NT16 456 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 PGBD2Q6P3X8 592 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 C16orf89Q6UX73 402 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 RBMS3Q6XE24 437 aaKnown RBP5.63□□□□□ -1.51
SCAF11-211ENST00000547950 USP43Q70EL4 1123 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 HIST2H3AQ71DI3 136 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 PIGWQ7Z7B1 504 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 ZBTB46Q86UZ6 589 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 CYB561A3Q8NBI2 242 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 DEFB108BQ8NET1 73 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 SLC26A10Q8NG04 563 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 OR51L1Q8NGJ5 315 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 FAM216AQ8WUB2 273 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 SPRYD4Q8WW59 207 aaPredicted RBP5.63□□□□□ -1.51
SCAF11-211ENST00000547950 DUX5Q96PT3 197 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 SIGLEC11Q96RL6 698 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 ATF6BQ99941 703 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 SLC30A2Q9BRI3 323 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 MRI1Q9BV20 369 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 RBM4Q9BWF3 364 aaKnown RBP5.63□□□□□ -1.51
SCAF11-211ENST00000547950 TMEM165Q9HC07 324 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 DDX28Q9NUL7 540 aaKnown RBP5.63□□□□□ -1.51
SCAF11-211ENST00000547950 MRPL22Q9NWU5 206 aaKnown RBP5.63□□□□□ -1.51
SCAF11-211ENST00000547950 CYB5R1Q9UHQ9 305 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 ATPIF1Q9UII2 106 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 ARL2BPQ9Y2Y0 163 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 AUP1Q9Y679 476 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 NBEAL1Q6ZS30 2694 aa5.63□□□□□ -1.51
SCAF11-211ENST00000547950 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.62□□□□□ -1.51
SCAF11-211ENST00000547950 PPIAL4EA0A075B759 164 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 IGHV3OR16-10A0A075B7F0 116 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 PPIAL4CA0A0B4J2A2 164 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 TMEM89A2RUT3 159 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 LRRC30A6NM36 301 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 CEACAM18A8MTB9 384 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 IQCF6A8MYZ5 107 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 PPIAL4DF5H284 164 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 F8W735 103 aaPredicted RBP5.62□□□□□ -1.51
SCAF11-211ENST00000547950 IFNL4K9M1U5 179 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 DCTN3O75935 186 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 CCNB2O95067 398 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 PPIAL4FP0DN26 164 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 IRF2P14316 349 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 RPS2P15880 293 aaKnown RBP5.62□□□□□ -1.51
SCAF11-211ENST00000547950 ZNF12P17014 697 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 CA6P23280 308 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 CD80P33681 288 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 GGT2P36268 569 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 PMELP40967 661 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 HMGA2P52926 109 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 TRAP1Q12931 704 aaKnown RBP5.62□□□□□ -1.51
SCAF11-211ENST00000547950 PPP1R8Q12972 351 aaKnown RBP5.62□□□□□ -1.51
SCAF11-211ENST00000547950 TAF13Q15543 124 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 OR8G1Q15617 311 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 ARMCX4Q5H9R4 360 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 FAM201AQ5SY85 155 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 ZNF620Q6ZNG0 422 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 COLCA1Q6ZS62 124 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 PGAP1Q75T13 922 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 MRPL21Q7Z2W9 205 aaKnown RBP5.62□□□□□ -1.51
SCAF11-211ENST00000547950 BCL6BQ8N143 479 aaPredicted RBP5.62□□□□□ -1.51
SCAF11-211ENST00000547950 MUC20Q8N307 709 aaPredicted RBP5.62□□□□□ -1.51
SCAF11-211ENST00000547950 LNX2Q8N448 690 aa5.62□□□□□ -1.51
SCAF11-211ENST00000547950 SIGLECL1Q8N7X8 197 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms