RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 CENPXA8MT69 81 aa11.8□□□□□ -0.52
PTCH1-215ENST00000547672 CTDSPLO15194 276 aa11.8□□□□□ -0.52
PTCH1-215ENST00000547672 DOK2O60496 412 aa11.8□□□□□ -0.52
PTCH1-215ENST00000547672 SS18L1O75177 396 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-215ENST00000547672 SCGNO76038 276 aa11.8□□□□□ -0.52
PTCH1-215ENST00000547672 ALDOBP05062 364 aa11.8□□□□□ -0.52
PTCH1-215ENST00000547672 IL7P13232 177 aa11.8□□□□□ -0.52
PTCH1-215ENST00000547672 MPGP29372 298 aa11.8□□□□□ -0.52
PTCH1-215ENST00000547672 ARF1P84077 181 aaKnown RBP11.8□□□□□ -0.52
PTCH1-215ENST00000547672 ZNF79Q15937 498 aa11.8□□□□□ -0.52
PTCH1-215ENST00000547672 HES5Q5TA89 166 aa11.8□□□□□ -0.52
PTCH1-215ENST00000547672 FBXW9Q5XUX1 488 aa11.8□□□□□ -0.52
PTCH1-215ENST00000547672 ANKRD16Q6P6B7 361 aa11.8□□□□□ -0.52
PTCH1-215ENST00000547672 FAM57BQ71RH2 274 aa11.8□□□□□ -0.52
PTCH1-215ENST00000547672 OR51A4Q8NGJ6 313 aa11.8□□□□□ -0.52
PTCH1-215ENST00000547672 OR51E1Q8TCB6 317 aa11.8□□□□□ -0.52
PTCH1-215ENST00000547672 PP6455Q8WZ26 134 aa11.8□□□□□ -0.52
PTCH1-215ENST00000547672 PTX4Q96A99 478 aa11.8□□□□□ -0.52
PTCH1-215ENST00000547672 ALKBH3Q96Q83 286 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-215ENST00000547672 OR2H1Q9GZK4 316 aa11.8□□□□□ -0.52
PTCH1-215ENST00000547672 SLC22A4Q9H015 551 aa11.8□□□□□ -0.52
PTCH1-215ENST00000547672 LIPGQ9Y5X9 500 aa11.8□□□□□ -0.52
PTCH1-215ENST00000547672 CACNA1CQ13936 2221 aa11.79□□□□□ -0.52
PTCH1-215ENST00000547672 TRAV8-7A0A075B6U6 113 aa11.79□□□□□ -0.52
PTCH1-215ENST00000547672 A0A0A6YYH2 397 aa11.79□□□□□ -0.52
PTCH1-215ENST00000547672 LOC100289279A0A1B0GTE1 492 aa11.79□□□□□ -0.52
PTCH1-215ENST00000547672 A6NJ64 397 aa11.79□□□□□ -0.52
PTCH1-215ENST00000547672 SYNGR3O43761 229 aa11.79□□□□□ -0.52
PTCH1-215ENST00000547672 PFDN1O60925 122 aa11.79□□□□□ -0.52
PTCH1-215ENST00000547672 CRHP06850 196 aa11.79□□□□□ -0.52
PTCH1-215ENST00000547672 SNRPBP14678 240 aaKnown RBP11.79□□□□□ -0.52
PTCH1-215ENST00000547672 B4GALT1P15291 398 aa11.79□□□□□ -0.52
PTCH1-215ENST00000547672 HTR2CP28335 458 aa11.79□□□□□ -0.52
PTCH1-215ENST00000547672 NTF4P34130 210 aa11.79□□□□□ -0.52
PTCH1-215ENST00000547672 THBS4P35443 961 aa11.79□□□□□ -0.52
PTCH1-215ENST00000547672 OR3A2P47893 321 aa11.79□□□□□ -0.52
PTCH1-215ENST00000547672 MMP15P51511 669 aa11.79□□□□□ -0.52
PTCH1-215ENST00000547672 ASAH1Q13510 395 aa11.79□□□□□ -0.52
PTCH1-215ENST00000547672 Q6ZSR3 168 aa11.79□□□□□ -0.52
PTCH1-215ENST00000547672 ADGRE4PQ86SQ3 457 aa11.79□□□□□ -0.52
PTCH1-215ENST00000547672 PLPP7Q8NBV4 271 aa11.79□□□□□ -0.52
PTCH1-215ENST00000547672 OR1M1Q8NGA1 313 aa11.79□□□□□ -0.52
PTCH1-215ENST00000547672 OR8B12Q8NGG6 310 aa11.79□□□□□ -0.52
PTCH1-215ENST00000547672 OR10AC1Q8NH08 325 aa11.79□□□□□ -0.52
PTCH1-215ENST00000547672 AKAP1Q92667 903 aaKnown RBP eCLIP11.79□□□□□ -0.52
PTCH1-215ENST00000547672 GPR84Q9NQS5 396 aa11.79□□□□□ -0.52
PTCH1-215ENST00000547672 FAIMQ9NVQ4 179 aa11.79□□□□□ -0.52
PTCH1-215ENST00000547672 A0A1B0GTI1 187 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 K7ENP7 123 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 XRCC2O43543 280 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 GSTZ1O43708 216 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-215ENST00000547672 WNT11O96014 354 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 PAHP00439 452 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 HLA-DQB1P01920 261 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 SERPINA5P05154 406 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 EIF4EP06730 217 aaKnown RBP11.78□□□□□ -0.52
PTCH1-215ENST00000547672 GSTT2BP0CG30 244 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 ZNF32P17041 273 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 ADRA2CP18825 462 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 CRYGSP22914 178 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 AGTR1P30556 359 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 MNDAP41218 407 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 MAP2K3P46734 347 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 HTR5AP47898 357 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 AP3S2P59780 193 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 PSG4Q00888 419 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 IFITM3Q01628 133 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 C1orf100Q5SVJ3 147 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 INO80CQ6PI98 192 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-215ENST00000547672 FAM214BQ7L5A3 538 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 SIAH3Q8IW03 269 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 SKA3Q8IX90 412 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 SPACA3Q8IXA5 215 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 OR4M1Q8NGD0 313 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 LGALS14Q8TCE9 139 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 PPP1R14AQ96A00 147 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 RFT1Q96AA3 541 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 FAM3DQ96BQ1 224 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 ZNF837Q96EG3 531 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-215ENST00000547672 ZFP3Q96NJ6 502 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 TRIB1Q96RU8 372 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 SDHCQ99643 169 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-215ENST00000547672 C7orf50Q9BRJ6 194 aaKnown RBP11.78□□□□□ -0.52
PTCH1-215ENST00000547672 TAS2R4Q9NYW5 299 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 CLCF1Q9UBD9 225 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 GHRLQ9UBU3 117 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 MALT1Q9UDY8 824 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 N6AMT1Q9Y5N5 214 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 CSAG2Q9Y5P2 127 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 MED12Q93074 2177 aa11.78□□□□□ -0.52
PTCH1-215ENST00000547672 PHF3Q92576 2039 aaKnown RBP11.77□□□□□ -0.52
PTCH1-215ENST00000547672 PTPRZ1P23471 2315 aaPredicted RBP11.77□□□□□ -0.52
PTCH1-215ENST00000547672 GVINP1Q7Z2Y8 2422 aa11.77□□□□□ -0.52
PTCH1-215ENST00000547672 METTL21EPA6NDL7 271 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 WDR1O75083 606 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 DHRS3O75911 302 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 ECDO95905 644 aaPredicted RBP11.77□□□□□ -0.53
PTCH1-215ENST00000547672 LCATP04180 440 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 CSF3P09919 207 aa11.77□□□□□ -0.53
PTCH1-215ENST00000547672 UBBP0CG47 229 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms