RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 RGCCQ9H4X1 137 aa13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 BRD7Q9NPI1 651 aa13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 G6PC2Q9NQR9 355 aa13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 BATF3Q9NR55 127 aa13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 NDUFA13Q9P0J0 144 aa13.74□□□□□ -0.21
TRAFD1-203ENST00000547063 A0A0U1RQV5 110 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 TUBAL3A6NHL2 446 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 OR4C45A6NMZ5 311 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 M0R1B8 84 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 XRCC2O43543 280 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 ICMTO60725 284 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 CRYAAP02489 173 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 ISG15P05161 165 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 CECR9P0C854 216 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 EPXP11678 715 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 CD36P16671 472 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 TUBG1P23258 451 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 CFL1P23528 166 aaKnown RBP13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 PTAFRP25105 342 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 PCSK6P29122 969 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 LIPAP38571 399 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 ZNF83P51522 516 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 NANOS3P60323 173 aaKnown RBP13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 SLC3A1Q07837 685 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 CDSNQ15517 529 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 YIF1BQ5BJH7 314 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 COLCA1Q6ZS62 124 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 FAM57BQ71RH2 274 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 ZFP41Q8N8Y5 198 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 CCDC54Q8NEL0 328 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 GHSRQ92847 366 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 RNF166Q96A37 237 aaPredicted RBP13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 WFIKKN1Q96NZ8 548 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 TUBG2Q9NRH3 451 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 TBCCD1Q9NVR7 557 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 ZNF281Q9Y2X9 895 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 SPEF1Q9Y4P9 236 aa13.73□□□□□ -0.21
TRAFD1-203ENST00000547063 CHD6Q8TD26 2715 aa13.72□□□□□ -0.21
TRAFD1-203ENST00000547063 IGHV1-18A0A0C4DH31 117 aa13.72□□□□□ -0.21
TRAFD1-203ENST00000547063 PNMA8CA0A1B0GUJ8 204 aa13.72□□□□□ -0.21
TRAFD1-203ENST00000547063 WIPF3A6NGB9 483 aa13.72□□□□□ -0.21
TRAFD1-203ENST00000547063 TBX1O43435 398 aa13.72□□□□□ -0.21
TRAFD1-203ENST00000547063 ZFPL1O95159 310 aa13.72□□□□□ -0.21
TRAFD1-203ENST00000547063 HLA-DPB1P04440 258 aa13.72□□□□□ -0.21
TRAFD1-203ENST00000547063 CELA3BP08861 270 aa13.72□□□□□ -0.21
TRAFD1-203ENST00000547063 ZNF12P17014 697 aa13.72□□□□□ -0.21
TRAFD1-203ENST00000547063 GALP22466 123 aa13.72□□□□□ -0.21
TRAFD1-203ENST00000547063 KIR3DL2P43630 455 aa13.72□□□□□ -0.21
TRAFD1-203ENST00000547063 NAAAQ02083 359 aa13.72□□□□□ -0.21
TRAFD1-203ENST00000547063 MALLQ13021 153 aa13.72□□□□□ -0.21
TRAFD1-203ENST00000547063 SSX1Q16384 188 aa13.72□□□□□ -0.21
TRAFD1-203ENST00000547063 ALKBH2Q6NS38 261 aa13.72□□□□□ -0.21
TRAFD1-203ENST00000547063 PRSS45Q7RTY3 260 aa13.72□□□□□ -0.21
TRAFD1-203ENST00000547063 WFDC8Q8IUA0 241 aa13.72□□□□□ -0.21
TRAFD1-203ENST00000547063 PRSS35Q8N3Z0 413 aa13.72□□□□□ -0.21
TRAFD1-203ENST00000547063 OR8B12Q8NGG6 310 aa13.72□□□□□ -0.21
TRAFD1-203ENST00000547063 AKAP1Q92667 903 aaKnown RBP eCLIP13.72□□□□□ -0.21
TRAFD1-203ENST00000547063 DACH2Q96NX9 599 aa13.72□□□□□ -0.21
TRAFD1-203ENST00000547063 OPA3Q9H6K4 179 aa13.72□□□□□ -0.21
TRAFD1-203ENST00000547063 SLC24A3Q9HC58 644 aa13.72□□□□□ -0.21
TRAFD1-203ENST00000547063 N6AMT1Q9Y5N5 214 aa13.72□□□□□ -0.21
TRAFD1-203ENST00000547063 SIRT4Q9Y6E7 314 aaPredicted RBP13.72□□□□□ -0.21
TRAFD1-203ENST00000547063 SMIM31A0A1B0GVY4 71 aa13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 J3QKU1 62 aa13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 CASKO14936 926 aa13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 NOL3O60936 208 aaKnown RBP13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 MTRF1O75570 445 aaKnown RBP13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 TTRP02766 147 aa13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 THBDP07204 575 aa13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 SLC2A1P11166 492 aa13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 CCL2P13500 99 aa13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 ZNF35P13682 527 aa13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 ACHEP22303 614 aa13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 MAPK3P27361 379 aaPredicted RBP13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 RAD52P43351 418 aa13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 DOC2BQ14184 412 aa13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 SEZ6L2Q6UXD5 910 aa13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 PAMR1Q6UXH9 720 aa13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 GDPGP1Q6ZNW5 385 aa13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 SATL1Q86VE3 508 aa13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 GPR148Q8TDV2 347 aa13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 TMIGD2Q96BF3 282 aa13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 YIPF6Q96EC8 236 aa13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 ZC3HAV1LQ96H79 300 aaKnown RBP13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 PGLYRP3Q96LB9 341 aa13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 PDCD1LG2Q9BQ51 273 aa13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 BCL2L14Q9BZR8 327 aa13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 ESRP2Q9H6T0 727 aaKnown RBP13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 RALYQ9UKM9 306 aaKnown RBP13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 HHLA2Q9UM44 414 aa13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 STUB1Q9UNE7 303 aa13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 SLC22A13Q9Y226 551 aa13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 KLF2Q9Y5W3 355 aaPredicted RBP13.71□□□□□ -0.21
TRAFD1-203ENST00000547063 HCFC1P51610 2035 aa13.71□□□□□ -0.22
TRAFD1-203ENST00000547063 IGHV2OR16-5A0A0B4J2B6 119 aa13.7□□□□□ -0.22
TRAFD1-203ENST00000547063 A0A1B0GVI7 797 aa13.7□□□□□ -0.22
TRAFD1-203ENST00000547063 CD40P25942 277 aa13.7□□□□□ -0.22
TRAFD1-203ENST00000547063 TGFBR2P37173 567 aa13.7□□□□□ -0.22
TRAFD1-203ENST00000547063 HGFACQ04756 655 aa13.7□□□□□ -0.22
TRAFD1-203ENST00000547063 DOK3Q7L591 496 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms