RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 GASTP01350 101 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 IFNGP01579 166 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 WNT2P09544 360 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 ZNF12P17014 697 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 ADRA2CP18825 462 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 FMO3P31513 532 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 PYCR1P32322 319 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 MAGEA2P43356 314 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 GATA4P43694 442 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 RAD23AP54725 363 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 MZT1Q08AG7 82 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 TRIM25Q14258 630 aaKnown RBP7.87□□□□□ -1.15
YBX3-218ENST00000546298 GK2Q14410 553 aaPredicted RBP7.87□□□□□ -1.15
YBX3-218ENST00000546298 TAF13Q15543 124 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 FAM98BQ52LJ0 330 aaKnown RBP7.87□□□□□ -1.15
YBX3-218ENST00000546298 ARMCX4Q5H9R4 360 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 OR2T5Q6IEZ7 315 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 ZNF770Q6IQ21 691 aaPredicted RBP7.87□□□□□ -1.15
YBX3-218ENST00000546298 LCN8Q6JVE9 175 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 DRAM2Q6UX65 266 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 BTNL3Q6UXE8 466 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 NLRC3Q7RTR2 1065 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 MOGAT3Q86VF5 341 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 LNX2Q8N448 690 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 SPERTQ8NA61 448 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 CYB561A3Q8NBI2 242 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 BHLHE23Q8NDY6 225 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 DEFB108BQ8NET1 73 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 OR10AD1Q8NGE0 317 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 OR9Q2Q8NGE9 314 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 OR2T29Q8NH02 315 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 SLCO4A1Q96BD0 722 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 ZNF799Q96GE5 643 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 LRGUKQ96M69 825 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 CCT8L2Q96SF2 557 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 DDOQ99489 341 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 BTBD10Q9BSF8 475 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 TSSK6Q9BXA6 273 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 FN3KQ9H479 309 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 TMEM165Q9HC07 324 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 PNRC2Q9NPJ4 139 aaKnown RBP7.87□□□□□ -1.15
YBX3-218ENST00000546298 TBC1D23Q9NUY8 699 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 MRPL22Q9NWU5 206 aaKnown RBP7.87□□□□□ -1.15
YBX3-218ENST00000546298 OPN4Q9UHM6 478 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 SAMHD1Q9Y3Z3 626 aaKnown RBP7.87□□□□□ -1.15
YBX3-218ENST00000546298 PPIAL4AQ9Y536 164 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 INSIG2Q9Y5U4 225 aa7.87□□□□□ -1.15
YBX3-218ENST00000546298 A0A1B0GWJ7 208 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 GGT3PA6NGU5 568 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 TVP23AA6NH52 213 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 RIIAD1A6NNX1 92 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 CD300LBA8K4G0 201 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 H0YL77 283 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 MLNRO43193 412 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 GMDSO60547 372 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 FSHBP01225 129 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 RPS2P15880 293 aaKnown RBP7.86□□□□□ -1.15
YBX3-218ENST00000546298 HOXB6P17509 224 aaKnown RBP7.86□□□□□ -1.15
YBX3-218ENST00000546298 ATP6V1B2P21281 511 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 CALB2P22676 271 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 SLC15A1P46059 708 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 SLC25A1P53007 311 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 GNB2P62879 340 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 MICAQ29983 383 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 LRRN1Q6UXK5 716 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 KLBQ86Z14 1044 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 FITM2Q8N6M3 262 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 AQP11Q8NBQ7 271 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 SLC37A3Q8NCC5 494 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 CCDC197Q8NCU1 140 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 OR2T33Q8NG76 320 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 OR8B3Q8NGG8 313 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 ZNF420Q8TAQ5 688 aaPredicted RBP7.86□□□□□ -1.15
YBX3-218ENST00000546298 Q8TCH9 128 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 RNF166Q96A37 237 aaPredicted RBP7.86□□□□□ -1.15
YBX3-218ENST00000546298 NEIL1Q96FI4 390 aaPredicted RBP7.86□□□□□ -1.15
YBX3-218ENST00000546298 MAP6Q96JE9 813 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 OR8B2Q96RD0 313 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 SLC6A7Q99884 636 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 COPS4Q9BT78 406 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 SSBP3Q9BWW4 388 aaPredicted RBP7.86□□□□□ -1.15
YBX3-218ENST00000546298 DGCR6LQ9BY27 220 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 SP140LQ9H930 580 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 WDR76Q9H967 626 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 MMP26Q9NRE1 261 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 DDX28Q9NUL7 540 aaKnown RBP7.86□□□□□ -1.15
YBX3-218ENST00000546298 NUP50Q9UKX7 468 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 PRPF19Q9UMS4 504 aaKnown RBP7.86□□□□□ -1.15
YBX3-218ENST00000546298 VPS13CQ709C8 3753 aa7.86□□□□□ -1.15
YBX3-218ENST00000546298 FBN1P35555 2871 aaKnown RBP7.85□□□□□ -1.15
YBX3-218ENST00000546298 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.85□□□□□ -1.15
YBX3-218ENST00000546298 IGHV3-64DA0A0J9YX35 117 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 TCRBV5S2A0A599 114 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 TMEM89A2RUT3 159 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 TRAPPC2LH3BP13 241 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 ZNF593O00488 134 aaPredicted RBP7.85□□□□□ -1.15
YBX3-218ENST00000546298 FAM107AO95990 144 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 CYB5R3P00387 301 aaPredicted RBP7.85□□□□□ -1.15
YBX3-218ENST00000546298 APOC1P02654 83 aa7.85□□□□□ -1.15
YBX3-218ENST00000546298 HLA-DPB1P04440 258 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms