RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 CRLF1O75462 422 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 LCATP04180 440 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 SELEP16581 610 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 SLC2A5P22732 501 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 TNFSF4P23510 183 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 SLC15A1P46059 708 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 MALLQ13021 153 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 GK2Q14410 553 aaPredicted RBP10.07□□□□□ -0.8
YBX3-217ENST00000546164 HLXQ14774 488 aaPredicted RBP10.07□□□□□ -0.8
YBX3-217ENST00000546164 PTGES3Q15185 160 aaKnown RBP10.07□□□□□ -0.8
YBX3-217ENST00000546164 SNAPC1Q16533 368 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 HFEQ30201 348 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 TMEM236Q5W0B7 351 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 OR2T2Q6IF00 324 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 CXXC5Q7LFL8 322 aaKnown RBP10.07□□□□□ -0.8
YBX3-217ENST00000546164 SHFQ7M4L6 423 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 DPY19L4Q7Z388 723 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 AMIGO2Q86SJ2 522 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 NAA40Q86UY6 237 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 ERI1Q8IV48 349 aaKnown RBP10.07□□□□□ -0.8
YBX3-217ENST00000546164 CPOQ8IVL8 374 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 OR8G5Q8NG78 346 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 OR6N2Q8NGY6 317 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 RNF133Q8WVZ7 376 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 OTULINQ96BN8 352 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 MSI2Q96DH6 328 aaKnown RBP10.07□□□□□ -0.8
YBX3-217ENST00000546164 PLEKHA8Q96JA3 519 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 COPS4Q9BT78 406 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 PRRG3Q9BZD7 231 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 TOR3AQ9H497 397 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 YAE1D1Q9NRH1 226 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 KRT84Q9NSB2 600 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 TMEFF2Q9UIK5 374 aaPredicted RBP10.07□□□□□ -0.8
YBX3-217ENST00000546164 MALRD1Q5VYJ5 2156 aa10.07□□□□□ -0.8
YBX3-217ENST00000546164 SVEP1Q4LDE5 3571 aa10.06□□□□□ -0.8
YBX3-217ENST00000546164 ATRQ13535 2644 aa10.06□□□□□ -0.8
YBX3-217ENST00000546164 ZAR1LA6NP61 321 aa10.06□□□□□ -0.8
YBX3-217ENST00000546164 CLDN25C9JDP6 229 aa10.06□□□□□ -0.8
YBX3-217ENST00000546164 H3BNX3 289 aa10.06□□□□□ -0.8
YBX3-217ENST00000546164 TPD52L2O43399 206 aaKnown RBP10.06□□□□□ -0.8
YBX3-217ENST00000546164 PPIHO43447 177 aaKnown RBP10.06□□□□□ -0.8
YBX3-217ENST00000546164 MITFO75030 526 aaPredicted RBP10.06□□□□□ -0.8
YBX3-217ENST00000546164 ZNF16P17020 682 aaPredicted RBP10.06□□□□□ -0.8
YBX3-217ENST00000546164 GRB2P62993 217 aaKnown RBP10.06□□□□□ -0.8
YBX3-217ENST00000546164 TNFAIP6P98066 277 aaPredicted RBP10.06□□□□□ -0.8
YBX3-217ENST00000546164 EFNB1P98172 346 aa10.06□□□□□ -0.8
YBX3-217ENST00000546164 SLC3A1Q07837 685 aa10.06□□□□□ -0.8
YBX3-217ENST00000546164 KPNB1Q14974 876 aaKnown RBP10.06□□□□□ -0.8
YBX3-217ENST00000546164 SLX4IPQ5VYV7 408 aa10.06□□□□□ -0.8
YBX3-217ENST00000546164 ZFP1Q6P2D0 407 aa10.06□□□□□ -0.8
YBX3-217ENST00000546164 OR13G1Q8NGZ3 307 aa10.06□□□□□ -0.8
YBX3-217ENST00000546164 OTOSQ8NHW6 89 aa10.06□□□□□ -0.8
YBX3-217ENST00000546164 PYDC1Q8WXC3 89 aa10.06□□□□□ -0.8
YBX3-217ENST00000546164 ZMYND19Q96E35 227 aaPredicted RBP10.06□□□□□ -0.8
YBX3-217ENST00000546164 ZNF582Q96NG8 517 aaPredicted RBP10.06□□□□□ -0.8
YBX3-217ENST00000546164 SLC30A2Q9BRI3 323 aa10.06□□□□□ -0.8
YBX3-217ENST00000546164 ABHD6Q9BV23 337 aa10.06□□□□□ -0.8
YBX3-217ENST00000546164 CENPMQ9NSP4 180 aa10.06□□□□□ -0.8
YBX3-217ENST00000546164 TVP23BQ9NYZ1 205 aa10.06□□□□□ -0.8
YBX3-217ENST00000546164 IL19Q9UHD0 177 aa10.06□□□□□ -0.8
YBX3-217ENST00000546164 OAZ3Q9UMX2 235 aa10.06□□□□□ -0.8
YBX3-217ENST00000546164 CACNG2Q9Y698 323 aa10.06□□□□□ -0.8
YBX3-217ENST00000546164 SELENOFO60613 162 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 APOC1P02654 83 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 TNFRSF1AP19438 455 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 IGFBP5P24593 272 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 EPHA2P29317 976 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 IL2RGP31785 369 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 OPRL1P41146 370 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 SLC6A9P48067 706 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 PRKXP51817 358 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 CDH15P55291 814 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 EIF2B1Q14232 305 aaKnown RBP10.05□□□□□ -0.8
YBX3-217ENST00000546164 TAF13Q15543 124 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 SNAI3Q3KNW1 292 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 KLHL12Q53G59 568 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 SPRNQ5BIV9 151 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 C12orf73Q69YU5 71 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 FAM166AQ6J272 317 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 PGAP1Q75T13 922 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 C10orf67Q8IYJ2 551 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 ZNF283Q8N7M2 679 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 BBS1Q8NFJ9 593 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 OR2Z1Q8NG97 314 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 CLDND2Q8NHS1 167 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 TIMD4Q96H15 378 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 CIB1Q99828 191 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 SOX7Q9BT81 388 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 REPIN1Q9BWE0 567 aaKnown RBP10.05□□□□□ -0.8
YBX3-217ENST00000546164 GABARAPL3Q9BY60 117 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 SEMA6AQ9H2E6 1030 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 OPA3Q9H6K4 179 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 WIPI2Q9Y4P8 454 aa10.05□□□□□ -0.8
YBX3-217ENST00000546164 LOC100289279A0A1B0GTE1 492 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 CCDC182A6NF36 153 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 IFNL4K9M1U5 179 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 WNT9BO14905 357 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 MLNRO43193 412 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 PRKYO43930 277 aa10.04□□□□□ -0.8
YBX3-217ENST00000546164 LMX1BO60663 402 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms