RNA–Protein interactions for RNA: ENST00000546033.1

PTP4A1P2-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 2, humanhuman

BASIC

Gene PTP4A1P2, Length 454 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P2-201ENST00000546033 AP4S1Q9Y587 144 aa13.03□□□□□ -0.32
PTP4A1P2-201ENST00000546033 FAM183AA6NL82 134 aa13.02□□□□□ -0.33
PTP4A1P2-201ENST00000546033 IQCF6A8MYZ5 107 aa13.02□□□□□ -0.33
PTP4A1P2-201ENST00000546033 ZNF878C9JN71 531 aa13.02□□□□□ -0.33
PTP4A1P2-201ENST00000546033 APOC1P02654 83 aa13.02□□□□□ -0.33
PTP4A1P2-201ENST00000546033 IGFBP5P24593 272 aa13.02□□□□□ -0.33
PTP4A1P2-201ENST00000546033 GSTT1P30711 240 aa13.02□□□□□ -0.33
PTP4A1P2-201ENST00000546033 GRB2P62993 217 aaKnown RBP13.02□□□□□ -0.33
PTP4A1P2-201ENST00000546033 CDK5Q00535 292 aa13.02□□□□□ -0.33
PTP4A1P2-201ENST00000546033 EIF2B1Q14232 305 aaKnown RBP13.02□□□□□ -0.33
PTP4A1P2-201ENST00000546033 PCK2Q16822 640 aa13.02□□□□□ -0.33
PTP4A1P2-201ENST00000546033 RSPO1Q2MKA7 263 aaPredicted RBP13.02□□□□□ -0.33
PTP4A1P2-201ENST00000546033 AVPI1Q5T686 147 aa13.02□□□□□ -0.33
PTP4A1P2-201ENST00000546033 ACSM5Q6NUN0 579 aa13.02□□□□□ -0.33
PTP4A1P2-201ENST00000546033 CCDC121Q6ZUS5 278 aa13.02□□□□□ -0.33
PTP4A1P2-201ENST00000546033 PGAP1Q75T13 922 aa13.02□□□□□ -0.33
PTP4A1P2-201ENST00000546033 MRPL21Q7Z2W9 205 aaKnown RBP13.02□□□□□ -0.33
PTP4A1P2-201ENST00000546033 GLCCI1Q86VQ1 547 aa13.02□□□□□ -0.33
PTP4A1P2-201ENST00000546033 C1orf159Q96HA4 380 aa13.02□□□□□ -0.33
PTP4A1P2-201ENST00000546033 KCNJ15Q99712 375 aa13.02□□□□□ -0.33
PTP4A1P2-201ENST00000546033 SP140LQ9H930 580 aa13.02□□□□□ -0.33
PTP4A1P2-201ENST00000546033 MED20Q9H944 212 aa13.02□□□□□ -0.33
PTP4A1P2-201ENST00000546033 TREM2Q9NZC2 230 aa13.02□□□□□ -0.33
PTP4A1P2-201ENST00000546033 NOP16Q9Y3C1 178 aaKnown RBP13.02□□□□□ -0.33
PTP4A1P2-201ENST00000546033 WIPI2Q9Y4P8 454 aa13.02□□□□□ -0.33
PTP4A1P2-201ENST00000546033 ISPDA4D126 451 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 G3V2T6 193 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 IFNL4K9M1U5 179 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 PRODHO43272 600 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 FAM157CP0CG43 387 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 HSD11B1P28845 292 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 SRP9P49458 86 aaKnown RBP13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 CRISP1P54107 249 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 RAD23AP54725 363 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 DVL1P1P54792 670 aaPredicted RBP13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 RPS7P62081 194 aaKnown RBP13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 GK2Q14410 553 aaPredicted RBP13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 ATP6AP1Q15904 470 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 KLHL12Q53G59 568 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 LINC01590Q5TEZ4 76 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 PLBD1Q6P4A8 553 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 Q6ZR03 302 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 DPY19L4Q7Z388 723 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 ZDHHC13Q8IUH4 622 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 ZNF283Q8N7M2 679 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 BHLHE23Q8NDY6 225 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 OR10S1Q8NGN2 331 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 SPRYD4Q8WW59 207 aaPredicted RBP13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 ITLN1Q8WWA0 313 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 UTP4Q969X6 686 aaKnown RBP13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 OR2V2Q96R30 315 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 GAL3ST1Q99999 423 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 SOX7Q9BT81 388 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 TOR3AQ9H497 397 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 OPA3Q9H6K4 179 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 NTN4Q9HB63 628 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 SLC25A19Q9HC21 320 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 TMEM100Q9NV29 134 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 ENOPH1Q9UHY7 261 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 PPP1R3CQ9UQK1 317 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 CACNG2Q9Y698 323 aa13.01□□□□□ -0.33
PTP4A1P2-201ENST00000546033 SRD5A1P18405 259 aa13□□□□□ -0.33
PTP4A1P2-201ENST00000546033 OTX1P32242 354 aaPredicted RBP13□□□□□ -0.33
PTP4A1P2-201ENST00000546033 PRKXP51817 358 aa13□□□□□ -0.33
PTP4A1P2-201ENST00000546033 ESRRGP62508 458 aa13□□□□□ -0.33
PTP4A1P2-201ENST00000546033 SNAPC1Q16533 368 aa13□□□□□ -0.33
PTP4A1P2-201ENST00000546033 CR1LQ2VPA4 569 aa13□□□□□ -0.33
PTP4A1P2-201ENST00000546033 SLC35D3Q5M8T2 416 aa13□□□□□ -0.33
PTP4A1P2-201ENST00000546033 FAM120AOSQ5T036 256 aa13□□□□□ -0.33
PTP4A1P2-201ENST00000546033 NAA40Q86UY6 237 aa13□□□□□ -0.33
PTP4A1P2-201ENST00000546033 PRIMA1Q86XR5 153 aa13□□□□□ -0.33
PTP4A1P2-201ENST00000546033 CPOQ8IVL8 374 aa13□□□□□ -0.33
PTP4A1P2-201ENST00000546033 PARP8Q8N3A8 854 aa13□□□□□ -0.33
PTP4A1P2-201ENST00000546033 OR51F2Q8NH61 342 aa13□□□□□ -0.33
PTP4A1P2-201ENST00000546033 SLC22A4Q9H015 551 aa13□□□□□ -0.33
PTP4A1P2-201ENST00000546033 ZNF665Q9H7R5 613 aa13□□□□□ -0.33
PTP4A1P2-201ENST00000546033 KRT84Q9NSB2 600 aa13□□□□□ -0.33
PTP4A1P2-201ENST00000546033 TMEFF2Q9UIK5 374 aaPredicted RBP13□□□□□ -0.33
PTP4A1P2-201ENST00000546033 WNK2Q9Y3S1 2297 aa13□□□□□ -0.33
PTP4A1P2-201ENST00000546033 GGT3PA6NGU5 568 aa12.99□□□□□ -0.33
PTP4A1P2-201ENST00000546033 WNT9BO14905 357 aa12.99□□□□□ -0.33
PTP4A1P2-201ENST00000546033 MSMBP08118 114 aa12.99□□□□□ -0.33
PTP4A1P2-201ENST00000546033 DAPP51397 102 aa12.99□□□□□ -0.33
PTP4A1P2-201ENST00000546033 LMO4P61968 165 aa12.99□□□□□ -0.33
PTP4A1P2-201ENST00000546033 FAHD1Q6P587 224 aa12.99□□□□□ -0.33
PTP4A1P2-201ENST00000546033 SPATC1Q76KD6 591 aa12.99□□□□□ -0.33
PTP4A1P2-201ENST00000546033 RHOUQ7L0Q8 258 aa12.99□□□□□ -0.33
PTP4A1P2-201ENST00000546033 CXXC5Q7LFL8 322 aaKnown RBP12.99□□□□□ -0.33
PTP4A1P2-201ENST00000546033 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.99□□□□□ -0.33
PTP4A1P2-201ENST00000546033 ZNF454Q8N9F8 522 aa12.99□□□□□ -0.33
PTP4A1P2-201ENST00000546033 OR10AD1Q8NGE0 317 aa12.99□□□□□ -0.33
PTP4A1P2-201ENST00000546033 ST7LQ8TDW4 575 aa12.99□□□□□ -0.33
PTP4A1P2-201ENST00000546033 TMEM186Q96B77 213 aa12.99□□□□□ -0.33
PTP4A1P2-201ENST00000546033 ZMYND19Q96E35 227 aaPredicted RBP12.99□□□□□ -0.33
PTP4A1P2-201ENST00000546033 DUS3LQ96G46 650 aaKnown RBP12.99□□□□□ -0.33
PTP4A1P2-201ENST00000546033 SLC30A2Q9BRI3 323 aa12.99□□□□□ -0.33
PTP4A1P2-201ENST00000546033 MARCH7Q9H992 704 aa12.99□□□□□ -0.33
PTP4A1P2-201ENST00000546033 TMEM106BQ9NUM4 274 aa12.99□□□□□ -0.33
PTP4A1P2-201ENST00000546033 TVP23BQ9NYZ1 205 aa12.99□□□□□ -0.33
PTP4A1P2-201ENST00000546033 PCDHB10Q9UN67 800 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 167.1 ms