RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 VMO1Q7Z5L0 202 aa12.07□□□□□ -0.48
RTN3-214ENST00000545432 DHDDSQ86SQ9 333 aa12.07□□□□□ -0.48
RTN3-214ENST00000545432 SPERTQ8NA61 448 aa12.07□□□□□ -0.48
RTN3-214ENST00000545432 BHLHE23Q8NDY6 225 aa12.07□□□□□ -0.48
RTN3-214ENST00000545432 OR10A6Q8NH74 314 aa12.07□□□□□ -0.48
RTN3-214ENST00000545432 PPP1R35Q8TAP8 253 aa12.07□□□□□ -0.48
RTN3-214ENST00000545432 C7orf26Q96N11 449 aa12.07□□□□□ -0.48
RTN3-214ENST00000545432 EBF4Q9BQW3 602 aa12.07□□□□□ -0.48
RTN3-214ENST00000545432 SLC22A4Q9H015 551 aa12.07□□□□□ -0.48
RTN3-214ENST00000545432 HDHD2Q9H0R4 259 aa12.07□□□□□ -0.48
RTN3-214ENST00000545432 A4GNTQ9UNA3 340 aa12.07□□□□□ -0.48
RTN3-214ENST00000545432 MEGF11A6BM72 1044 aa12.06□□□□□ -0.48
RTN3-214ENST00000545432 BTBD17A6NE02 478 aa12.06□□□□□ -0.48
RTN3-214ENST00000545432 H7C1C5 153 aa12.06□□□□□ -0.48
RTN3-214ENST00000545432 DVL1O14640 695 aa12.06□□□□□ -0.48
RTN3-214ENST00000545432 CD14P08571 375 aa12.06□□□□□ -0.48
RTN3-214ENST00000545432 TNFRSF1BP20333 461 aa12.06□□□□□ -0.48
RTN3-214ENST00000545432 SLC9A3P48764 834 aa12.06□□□□□ -0.48
RTN3-214ENST00000545432 LCN6P62502 163 aa12.06□□□□□ -0.48
RTN3-214ENST00000545432 PRKCDQ05655 676 aa12.06□□□□□ -0.48
RTN3-214ENST00000545432 ST3GAL3Q11203 375 aa12.06□□□□□ -0.48
RTN3-214ENST00000545432 BEND6Q5SZJ8 279 aaPredicted RBP12.06□□□□□ -0.48
RTN3-214ENST00000545432 SFRP4Q6FHJ7 346 aaPredicted RBP12.06□□□□□ -0.48
RTN3-214ENST00000545432 C1orf122Q6ZSJ8 110 aa12.06□□□□□ -0.48
RTN3-214ENST00000545432 CROCCP2Q86T23 111 aa12.06□□□□□ -0.48
RTN3-214ENST00000545432 CALHM3Q86XJ0 350 aa12.06□□□□□ -0.48
RTN3-214ENST00000545432 FAM90A1Q86YD7 464 aa12.06□□□□□ -0.48
RTN3-214ENST00000545432 GLB1L2Q8IW92 636 aa12.06□□□□□ -0.48
RTN3-214ENST00000545432 GCSAMQ8N6F7 178 aa12.06□□□□□ -0.48
RTN3-214ENST00000545432 WFDC9Q8NEX5 89 aa12.06□□□□□ -0.48
RTN3-214ENST00000545432 OR51A7Q8NH64 312 aa12.06□□□□□ -0.48
RTN3-214ENST00000545432 TSPEARQ8WU66 669 aa12.06□□□□□ -0.48
RTN3-214ENST00000545432 Q96M85 177 aa12.06□□□□□ -0.48
RTN3-214ENST00000545432 HCAR1Q9BXC0 346 aa12.06□□□□□ -0.48
RTN3-214ENST00000545432 SEMA6AQ9H2E6 1030 aa12.06□□□□□ -0.48
RTN3-214ENST00000545432 MMADHCQ9H3L0 296 aaPredicted RBP12.06□□□□□ -0.48
RTN3-214ENST00000545432 FN3KRPQ9HA64 309 aa12.06□□□□□ -0.48
RTN3-214ENST00000545432 UFSP2Q9NUQ7 469 aa12.06□□□□□ -0.48
RTN3-214ENST00000545432 VSX1Q9NZR4 365 aaPredicted RBP12.06□□□□□ -0.48
RTN3-214ENST00000545432 TRAV27A0A087WT01 109 aa12.05□□□□□ -0.48
RTN3-214ENST00000545432 OOEPA6NGQ2 149 aa12.05□□□□□ -0.48
RTN3-214ENST00000545432 GMDSO60547 372 aa12.05□□□□□ -0.48
RTN3-214ENST00000545432 KHDRBS3O75525 346 aaKnown RBP12.05□□□□□ -0.48
RTN3-214ENST00000545432 GUCA2AQ02747 115 aa12.05□□□□□ -0.48
RTN3-214ENST00000545432 OAFQ86UD1 273 aa12.05□□□□□ -0.48
RTN3-214ENST00000545432 RNF113BQ8IZP6 322 aaKnown RBP12.05□□□□□ -0.48
RTN3-214ENST00000545432 Q8N7P7 452 aa12.05□□□□□ -0.48
RTN3-214ENST00000545432 GJC3Q8NFK1 279 aa12.05□□□□□ -0.48
RTN3-214ENST00000545432 PHF21AQ96BD5 680 aa12.05□□□□□ -0.48
RTN3-214ENST00000545432 RANBP3Q9H6Z4 567 aaPredicted RBP12.05□□□□□ -0.48
RTN3-214ENST00000545432 WDR76Q9H967 626 aa12.05□□□□□ -0.48
RTN3-214ENST00000545432 NMNAT1Q9HAN9 279 aaPredicted RBP12.05□□□□□ -0.48
RTN3-214ENST00000545432 GRHPRQ9UBQ7 328 aa12.05□□□□□ -0.48
RTN3-214ENST00000545432 FOXJ3Q9UPW0 622 aa12.05□□□□□ -0.48
RTN3-214ENST00000545432 COA3Q9Y2R0 106 aaPredicted RBP12.05□□□□□ -0.48
RTN3-214ENST00000545432 SIGLEC9Q9Y336 463 aa12.05□□□□□ -0.48
RTN3-214ENST00000545432 NDUFAF1Q9Y375 327 aa12.05□□□□□ -0.48
RTN3-214ENST00000545432 ADAM18Q9Y3Q7 739 aa12.05□□□□□ -0.48
RTN3-214ENST00000545432 MAB21L2Q9Y586 359 aa12.05□□□□□ -0.48
RTN3-214ENST00000545432 LHFPL6Q9Y693 200 aa12.05□□□□□ -0.48
RTN3-214ENST00000545432 ELOVL7A1L3X0 281 aa12.04□□□□□ -0.48
RTN3-214ENST00000545432 NPFFO15130 113 aa12.04□□□□□ -0.48
RTN3-214ENST00000545432 SHOX2O60902 331 aaPredicted RBP12.04□□□□□ -0.48
RTN3-214ENST00000545432 PPP1R3DO95685 299 aa12.04□□□□□ -0.48
RTN3-214ENST00000545432 ACSM4P0C7M7 580 aa12.04□□□□□ -0.48
RTN3-214ENST00000545432 OR1E2P47887 323 aa12.04□□□□□ -0.48
RTN3-214ENST00000545432 EMX1Q04741 257 aaPredicted RBP12.04□□□□□ -0.48
RTN3-214ENST00000545432 DBPQ10586 325 aaPredicted RBP12.04□□□□□ -0.48
RTN3-214ENST00000545432 OTPQ5XKR4 325 aa12.04□□□□□ -0.48
RTN3-214ENST00000545432 TMPRSS11FQ6ZWK6 438 aa12.04□□□□□ -0.48
RTN3-214ENST00000545432 NRMQ8IXM6 262 aa12.04□□□□□ -0.48
RTN3-214ENST00000545432 PDZD9Q8IXQ8 264 aa12.04□□□□□ -0.48
RTN3-214ENST00000545432 BEND2Q8NDZ0 799 aa12.04□□□□□ -0.48
RTN3-214ENST00000545432 C8orf46Q8TAG6 207 aa12.04□□□□□ -0.48
RTN3-214ENST00000545432 WIPF2Q8TF74 440 aaPredicted RBP12.04□□□□□ -0.48
RTN3-214ENST00000545432 STON2Q8WXE9 905 aa12.04□□□□□ -0.48
RTN3-214ENST00000545432 PRRC1Q96M27 445 aa12.04□□□□□ -0.48
RTN3-214ENST00000545432 PPA2Q9H2U2 334 aa12.04□□□□□ -0.48
RTN3-214ENST00000545432 RABEP2Q9H5N1 569 aa12.04□□□□□ -0.48
RTN3-214ENST00000545432 NOP16Q9Y3C1 178 aaKnown RBP12.04□□□□□ -0.48
RTN3-214ENST00000545432 ANKRD61A6NGH8 418 aa12.03□□□□□ -0.48
RTN3-214ENST00000545432 EFCAB9A8MZ26 197 aa12.03□□□□□ -0.48
RTN3-214ENST00000545432 CDC42EP2O14613 210 aa12.03□□□□□ -0.48
RTN3-214ENST00000545432 SLC16A7O60669 478 aa12.03□□□□□ -0.48
RTN3-214ENST00000545432 PTP4A3O75365 173 aa12.03□□□□□ -0.48
RTN3-214ENST00000545432 GYPAP02724 150 aa12.03□□□□□ -0.48
RTN3-214ENST00000545432 UBE2E1P51965 193 aa12.03□□□□□ -0.48
RTN3-214ENST00000545432 AANATQ16613 207 aa12.03□□□□□ -0.48
RTN3-214ENST00000545432 FOXB2Q5VYV0 432 aa12.03□□□□□ -0.48
RTN3-214ENST00000545432 PGM2L1Q6PCE3 622 aa12.03□□□□□ -0.48
RTN3-214ENST00000545432 KLHDC1Q8N7A1 406 aa12.03□□□□□ -0.48
RTN3-214ENST00000545432 SGCDQ92629 289 aa12.03□□□□□ -0.48
RTN3-214ENST00000545432 SLCO4A1Q96BD0 722 aa12.03□□□□□ -0.48
RTN3-214ENST00000545432 AJUBAQ96IF1 538 aa12.03□□□□□ -0.48
RTN3-214ENST00000545432 GPX7Q96SL4 187 aaPredicted RBP12.03□□□□□ -0.48
RTN3-214ENST00000545432 MEGF9Q9H1U4 602 aa12.03□□□□□ -0.48
RTN3-214ENST00000545432 SYT4Q9H2B2 425 aa12.03□□□□□ -0.48
RTN3-214ENST00000545432 CENPHQ9H3R5 247 aa12.03□□□□□ -0.48
RTN3-214ENST00000545432 NRIP3Q9NQ35 241 aa12.03□□□□□ -0.48
RTN3-214ENST00000545432 ADARB2-AS1A8MUL3 147 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms