RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 OR13G1Q8NGZ3 307 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 RAB1CQ92928 201 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 KCNJ15Q99712 375 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 PRRG3Q9BZD7 231 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 SLC25A19Q9HC21 320 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 KRT84Q9NSB2 600 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 TMEM160Q9NX00 188 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 IL19Q9UHD0 177 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 ENOPH1Q9UHY7 261 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 CDC42EP3Q9UKI2 254 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 TLN2Q9Y4G6 2542 aa13.35□□□□□ -0.27
CCDC78-216ENST00000544996 FN1P02751 2386 aaKnown RBP13.34□□□□□ -0.27
CCDC78-216ENST00000544996 IL2RGP31785 369 aa13.34□□□□□ -0.27
CCDC78-216ENST00000544996 OTX1P32242 354 aaPredicted RBP13.34□□□□□ -0.27
CCDC78-216ENST00000544996 RPS7P62081 194 aaKnown RBP13.34□□□□□ -0.27
CCDC78-216ENST00000544996 ESRRGP62508 458 aa13.34□□□□□ -0.27
CCDC78-216ENST00000544996 GRB2P62993 217 aaKnown RBP13.34□□□□□ -0.27
CCDC78-216ENST00000544996 MVKQ03426 396 aa13.34□□□□□ -0.27
CCDC78-216ENST00000544996 EIF2B1Q14232 305 aaKnown RBP13.34□□□□□ -0.27
CCDC78-216ENST00000544996 GK2Q14410 553 aaPredicted RBP13.34□□□□□ -0.27
CCDC78-216ENST00000544996 Q6ZR03 302 aa13.34□□□□□ -0.27
CCDC78-216ENST00000544996 PGAP1Q75T13 922 aa13.34□□□□□ -0.27
CCDC78-216ENST00000544996 MRPL21Q7Z2W9 205 aaKnown RBP13.34□□□□□ -0.27
CCDC78-216ENST00000544996 DPY19L4Q7Z388 723 aa13.34□□□□□ -0.27
CCDC78-216ENST00000544996 AMIGO2Q86SJ2 522 aa13.34□□□□□ -0.27
CCDC78-216ENST00000544996 CPOQ8IVL8 374 aa13.34□□□□□ -0.27
CCDC78-216ENST00000544996 CLDND2Q8NHS1 167 aa13.34□□□□□ -0.27
CCDC78-216ENST00000544996 ST7LQ8TDW4 575 aa13.34□□□□□ -0.27
CCDC78-216ENST00000544996 LRTOMTQ8WZ04 291 aa13.34□□□□□ -0.27
CCDC78-216ENST00000544996 ZMYND19Q96E35 227 aaPredicted RBP13.34□□□□□ -0.27
CCDC78-216ENST00000544996 MARCH7Q9H992 704 aa13.34□□□□□ -0.27
CCDC78-216ENST00000544996 TVP23BQ9NYZ1 205 aa13.34□□□□□ -0.27
CCDC78-216ENST00000544996 LPAR3Q9UBY5 353 aa13.34□□□□□ -0.27
CCDC78-216ENST00000544996 CACNG2Q9Y698 323 aa13.34□□□□□ -0.27
CCDC78-216ENST00000544996 ABCA1O95477 2261 aa13.33□□□□□ -0.28
CCDC78-216ENST00000544996 IQCF6A8MYZ5 107 aa13.33□□□□□ -0.28
CCDC78-216ENST00000544996 B4DSR2 109 aa13.33□□□□□ -0.28
CCDC78-216ENST00000544996 APOC1P02654 83 aa13.33□□□□□ -0.28
CCDC78-216ENST00000544996 PSKH1P11801 424 aa13.33□□□□□ -0.28
CCDC78-216ENST00000544996 HSD11B1P28845 292 aa13.33□□□□□ -0.28
CCDC78-216ENST00000544996 PRKXP51817 358 aa13.33□□□□□ -0.28
CCDC78-216ENST00000544996 PTGES3Q15185 160 aaKnown RBP13.33□□□□□ -0.28
CCDC78-216ENST00000544996 SLC35D3Q5M8T2 416 aa13.33□□□□□ -0.28
CCDC78-216ENST00000544996 AVPI1Q5T686 147 aa13.33□□□□□ -0.28
CCDC78-216ENST00000544996 SPATC1Q76KD6 591 aa13.33□□□□□ -0.28
CCDC78-216ENST00000544996 RHOUQ7L0Q8 258 aa13.33□□□□□ -0.28
CCDC78-216ENST00000544996 CXXC5Q7LFL8 322 aaKnown RBP13.33□□□□□ -0.28
CCDC78-216ENST00000544996 ZNF454Q8N9F8 522 aa13.33□□□□□ -0.28
CCDC78-216ENST00000544996 BHLHE23Q8NDY6 225 aa13.33□□□□□ -0.28
CCDC78-216ENST00000544996 SPRYD4Q8WW59 207 aaPredicted RBP13.33□□□□□ -0.28
CCDC78-216ENST00000544996 CENPNQ96H22 339 aaPredicted RBP13.33□□□□□ -0.28
CCDC78-216ENST00000544996 SOX7Q9BT81 388 aa13.33□□□□□ -0.28
CCDC78-216ENST00000544996 ABHD6Q9BV23 337 aa13.33□□□□□ -0.28
CCDC78-216ENST00000544996 BEX2Q9BXY8 128 aa13.33□□□□□ -0.28
CCDC78-216ENST00000544996 SHARPINQ9H0F6 387 aa13.33□□□□□ -0.28
CCDC78-216ENST00000544996 TOR3AQ9H497 397 aa13.33□□□□□ -0.28
CCDC78-216ENST00000544996 SP140LQ9H930 580 aa13.33□□□□□ -0.28
CCDC78-216ENST00000544996 TMEM100Q9NV29 134 aa13.33□□□□□ -0.28
CCDC78-216ENST00000544996 TREM2Q9NZC2 230 aa13.33□□□□□ -0.28
CCDC78-216ENST00000544996 WIPI2Q9Y4P8 454 aa13.33□□□□□ -0.28
CCDC78-216ENST00000544996 ANPEPP15144 967 aa13.32□□□□□ -0.28
CCDC78-216ENST00000544996 SRP9P49458 86 aaKnown RBP13.32□□□□□ -0.28
CCDC78-216ENST00000544996 CDH15P55291 814 aa13.32□□□□□ -0.28
CCDC78-216ENST00000544996 ACTR3P61158 418 aa13.32□□□□□ -0.28
CCDC78-216ENST00000544996 TIGD4Q8IY51 512 aa13.32□□□□□ -0.28
CCDC78-216ENST00000544996 C10orf67Q8IYJ2 551 aa13.32□□□□□ -0.28
CCDC78-216ENST00000544996 ZNF283Q8N7M2 679 aa13.32□□□□□ -0.28
CCDC78-216ENST00000544996 RNF133Q8WVZ7 376 aa13.32□□□□□ -0.28
CCDC78-216ENST00000544996 C1orf159Q96HA4 380 aa13.32□□□□□ -0.28
CCDC78-216ENST00000544996 OR2V2Q96R30 315 aa13.32□□□□□ -0.28
CCDC78-216ENST00000544996 SLC30A2Q9BRI3 323 aa13.32□□□□□ -0.28
CCDC78-216ENST00000544996 GABARAPL1Q9H0R8 117 aa13.32□□□□□ -0.28
CCDC78-216ENST00000544996 PPP1R3CQ9UQK1 317 aa13.32□□□□□ -0.28
CCDC78-216ENST00000544996 N6AMT1Q9Y5N5 214 aa13.32□□□□□ -0.28
CCDC78-216ENST00000544996 WNT9BO14905 357 aa13.31□□□□□ -0.28
CCDC78-216ENST00000544996 LYNP07948 512 aa13.31□□□□□ -0.28
CCDC78-216ENST00000544996 HNF1AP20823 631 aa13.31□□□□□ -0.28
CCDC78-216ENST00000544996 PCMT1P22061 227 aa13.31□□□□□ -0.28
CCDC78-216ENST00000544996 CX3CR1P49238 355 aa13.31□□□□□ -0.28
CCDC78-216ENST00000544996 RAD23AP54725 363 aa13.31□□□□□ -0.28
CCDC78-216ENST00000544996 APOFQ13790 326 aa13.31□□□□□ -0.28
CCDC78-216ENST00000544996 SNAI3Q3KNW1 292 aa13.31□□□□□ -0.28
CCDC78-216ENST00000544996 SPRNQ5BIV9 151 aa13.31□□□□□ -0.28
CCDC78-216ENST00000544996 KDM4DQ6B0I6 523 aa13.31□□□□□ -0.28
CCDC78-216ENST00000544996 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.31□□□□□ -0.28
CCDC78-216ENST00000544996 OR10AD1Q8NGE0 317 aa13.31□□□□□ -0.28
CCDC78-216ENST00000544996 OTOSQ8NHW6 89 aa13.31□□□□□ -0.28
CCDC78-216ENST00000544996 THEM6Q8WUY1 208 aa13.31□□□□□ -0.28
CCDC78-216ENST00000544996 ITLN1Q8WWA0 313 aa13.31□□□□□ -0.28
CCDC78-216ENST00000544996 RAB39BQ96DA2 213 aa13.31□□□□□ -0.28
CCDC78-216ENST00000544996 OSBPL10Q9BXB5 764 aa13.31□□□□□ -0.28
CCDC78-216ENST00000544996 SLC22A4Q9H015 551 aa13.31□□□□□ -0.28
CCDC78-216ENST00000544996 SEMA6AQ9H2E6 1030 aa13.31□□□□□ -0.28
CCDC78-216ENST00000544996 OPA3Q9H6K4 179 aa13.31□□□□□ -0.28
CCDC78-216ENST00000544996 TMEM106BQ9NUM4 274 aa13.31□□□□□ -0.28
CCDC78-216ENST00000544996 NOP16Q9Y3C1 178 aaKnown RBP13.31□□□□□ -0.28
CCDC78-216ENST00000544996 ISPDA4D126 451 aa13.3□□□□□ -0.28
CCDC78-216ENST00000544996 GGT3PA6NGU5 568 aa13.3□□□□□ -0.28
CCDC78-216ENST00000544996 IFNL4K9M1U5 179 aa13.3□□□□□ -0.28
CCDC78-216ENST00000544996 XRCC2O43543 280 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms