RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 BEND4Q6ZU67 534 aa5.21□□□□□ -1.57
VPS50-220ENST00000544910 ZNF321PQ8N8H1 164 aa5.21□□□□□ -1.57
VPS50-220ENST00000544910 OR52B4Q8NGK2 314 aa5.21□□□□□ -1.57
VPS50-220ENST00000544910 TTC9Q92623 222 aa5.21□□□□□ -1.57
VPS50-220ENST00000544910 UBL7Q96S82 380 aaPredicted RBP5.21□□□□□ -1.57
VPS50-220ENST00000544910 PPP1R3EQ9H7J1 279 aa5.21□□□□□ -1.57
VPS50-220ENST00000544910 PARPBPQ9NWS1 579 aa5.21□□□□□ -1.57
VPS50-220ENST00000544910 FBXO7Q9Y3I1 522 aa5.21□□□□□ -1.57
VPS50-220ENST00000544910 RHBDD3Q9Y3P4 386 aa5.21□□□□□ -1.57
VPS50-220ENST00000544910 ALG1L2C9J202 215 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 TRIM77I1YAP6 450 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 SLC17A2O00624 439 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 KLF4O43474 513 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 NDUFB6O95139 128 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 CD3DP04234 171 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 FABP1P07148 127 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 CT45A8P0DMV1 189 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 CT45A9P0DMV2 189 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 FASLGP48023 281 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 CLDN6P56747 220 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 PLP2Q04941 152 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 PLA1AQ53H76 456 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 CT45A2Q5DJT8 189 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 BEX5Q5H9J7 111 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 OTPQ5XKR4 325 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 PLCXD3Q63HM9 321 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 SMIM15Q7Z3B0 74 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 ANKRD37Q7Z713 158 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 C1orf87Q8N0U7 546 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 OR51E1Q8TCB6 317 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 PTPMT1Q8WUK0 201 aaPredicted RBP5.21□□□□□ -1.58
VPS50-220ENST00000544910 RNF170Q96K19 258 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 NMNAT2Q9BZQ4 307 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 ENKD1Q9H0I2 346 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 UBE2ZQ9H832 354 aaPredicted RBP5.21□□□□□ -1.58
VPS50-220ENST00000544910 ACKR4Q9NPB9 350 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 DLL4Q9NR61 685 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 CTSFQ9UBX1 484 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 PUS1Q9Y606 427 aaKnown RBP eCLIP5.21□□□□□ -1.58
VPS50-220ENST00000544910 SIGLEC6O43699 453 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 PIAS2O75928 621 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 RECKO95980 971 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 THY1P04216 161 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 GUSBP08236 651 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 DPP4P27487 766 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 GDF1P27539 372 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 PCBD1P61457 104 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 GUCA2AQ02747 115 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 SRYQ05066 204 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 RIN1Q13671 783 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 SLC9A3R2Q15599 337 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 PTCRAQ6ISU1 281 aaPredicted RBP5.21□□□□□ -1.58
VPS50-220ENST00000544910 TMEM71Q6P5X7 295 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 NAA40Q86UY6 237 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 ZNF695Q8IW36 515 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 SPICQ8N5J4 248 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 IFI44Q8TCB0 444 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 CCDC74BQ96LY2 380 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 OXGR1Q96P68 337 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 ABHD6Q9BV23 337 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 EMC6Q9BV81 110 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 VN1R1Q9GZP7 353 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 ZMAT3Q9HA38 289 aaKnown RBP5.21□□□□□ -1.58
VPS50-220ENST00000544910 FTCDNL1E5RQL4 147 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 PLPP3O14495 311 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 FOXS1O43638 330 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 LANCL1O43813 399 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 CTAG2O75638 210 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 STK17BO94768 372 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 BGLAPP02818 100 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 FOLR1P15328 257 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 ZNF16P17020 682 aaPredicted RBP5.21□□□□□ -1.58
VPS50-220ENST00000544910 PAX6P26367 422 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 RANP62826 216 aaKnown RBP5.21□□□□□ -1.58
VPS50-220ENST00000544910 TFF2Q03403 129 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 MFGE8Q08431 387 aaPredicted RBP5.21□□□□□ -1.58
VPS50-220ENST00000544910 C17orf107Q6ZR85 190 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 ANGPTL5Q86XS5 388 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 SULF2Q8IWU5 870 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 CDH26Q8IXH8 852 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 C4orf45Q96LM5 186 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 ZCCHC4Q9H5U6 513 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 FRRS1LQ9P0K9 344 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 KCNE5Q9UJ90 142 aa5.21□□□□□ -1.58
VPS50-220ENST00000544910 TRAV20A0A0B4J274 112 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 CYTIPO60759 359 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 OR4E1P0C645 316 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 CPN1P15169 458 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 CPT2P23786 658 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 SNU13P55769 128 aaKnown RBP5.2□□□□□ -1.58
VPS50-220ENST00000544910 SLC37A1P57057 533 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 NXPH1P58417 271 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 TAS2R30P59541 319 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 CBLN3Q6UW01 205 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 ZNF100Q8IYN0 542 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 CMTM1Q8IZ96 169 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 ZPLD1Q8TCW7 415 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 ASB10Q8WXI3 467 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 HSD17B8Q92506 261 aa5.2□□□□□ -1.58
VPS50-220ENST00000544910 KCNJ15Q99712 375 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms