RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 ANOS1P23352 680 aa11.7□□□□□ -0.54
SP140-213ENST00000543928 RIDAP52758 137 aaKnown RBP11.7□□□□□ -0.54
SP140-213ENST00000543928 ZNF121P58317 390 aaPredicted RBP11.7□□□□□ -0.54
SP140-213ENST00000543928 EFNB3Q15768 340 aa11.7□□□□□ -0.54
SP140-213ENST00000543928 MST1LQ2TV78 715 aa11.7□□□□□ -0.54
SP140-213ENST00000543928 SNAI3Q3KNW1 292 aa11.7□□□□□ -0.54
SP140-213ENST00000543928 ZNF718Q3SXZ3 478 aa11.7□□□□□ -0.54
SP140-213ENST00000543928 BPIFB6Q8NFQ5 453 aa11.7□□□□□ -0.54
SP140-213ENST00000543928 OR5L1Q8NGL2 311 aa11.7□□□□□ -0.54
SP140-213ENST00000543928 SYNPRQ8TBG9 265 aa11.7□□□□□ -0.54
SP140-213ENST00000543928 KLF14Q8TD94 323 aaPredicted RBP11.7□□□□□ -0.54
SP140-213ENST00000543928 SNX33Q8WV41 574 aa11.7□□□□□ -0.54
SP140-213ENST00000543928 CNBD2Q96M20 576 aa11.7□□□□□ -0.54
SP140-213ENST00000543928 COG8Q96MW5 612 aa11.7□□□□□ -0.54
SP140-213ENST00000543928 RHNO1Q9BSD3 238 aa11.7□□□□□ -0.54
SP140-213ENST00000543928 TRAF4Q9BUZ4 470 aaPredicted RBP11.7□□□□□ -0.54
SP140-213ENST00000543928 BRD7Q9NPI1 651 aa11.7□□□□□ -0.54
SP140-213ENST00000543928 PTTG3PQ9NZH4 202 aa11.7□□□□□ -0.54
SP140-213ENST00000543928 MRM2Q9UI43 246 aaKnown RBP11.7□□□□□ -0.54
SP140-213ENST00000543928 DUSP13Q9UII6 198 aa11.7□□□□□ -0.54
SP140-213ENST00000543928 NAV2Q8IVL1 2488 aa11.7□□□□□ -0.54
SP140-213ENST00000543928 ANKRD17O75179 2603 aaKnown RBP11.7□□□□□ -0.54
SP140-213ENST00000543928 TMEM129A0AVI4 362 aa11.69□□□□□ -0.54
SP140-213ENST00000543928 IRGMA1A4Y4 181 aa11.69□□□□□ -0.54
SP140-213ENST00000543928 C5orf63A6NC05 138 aa11.69□□□□□ -0.54
SP140-213ENST00000543928 CLPTM1O96005 669 aa11.69□□□□□ -0.54
SP140-213ENST00000543928 IGHA1P01876 353 aa11.69□□□□□ -0.54
SP140-213ENST00000543928 TUBG1P23258 451 aa11.69□□□□□ -0.54
SP140-213ENST00000543928 DNASE1P24855 282 aa11.69□□□□□ -0.54
SP140-213ENST00000543928 GCH1P30793 250 aa11.69□□□□□ -0.54
SP140-213ENST00000543928 MPV17P39210 176 aa11.69□□□□□ -0.54
SP140-213ENST00000543928 KLF3P57682 345 aaPredicted RBP11.69□□□□□ -0.54
SP140-213ENST00000543928 PSMA6P60900 246 aaKnown RBP11.69□□□□□ -0.54
SP140-213ENST00000543928 HLXQ14774 488 aaPredicted RBP11.69□□□□□ -0.54
SP140-213ENST00000543928 SWI5Q1ZZU3 235 aa11.69□□□□□ -0.54
SP140-213ENST00000543928 C6orf141Q5SZD1 244 aa11.69□□□□□ -0.54
SP140-213ENST00000543928 MBNL2Q5VZF2 373 aaKnown RBP11.69□□□□□ -0.54
SP140-213ENST00000543928 C11orf71Q6IPW1 123 aa11.69□□□□□ -0.54
SP140-213ENST00000543928 PLEKHG7Q6ZR37 379 aa11.69□□□□□ -0.54
SP140-213ENST00000543928 FAM57BQ71RH2 274 aa11.69□□□□□ -0.54
SP140-213ENST00000543928 CDH24Q86UP0 819 aa11.69□□□□□ -0.54
SP140-213ENST00000543928 LHFPL3Q86UP9 236 aa11.69□□□□□ -0.54
SP140-213ENST00000543928 YIPF7Q8N8F6 280 aa11.69□□□□□ -0.54
SP140-213ENST00000543928 IGFBPL1Q8WX77 278 aa11.69□□□□□ -0.54
SP140-213ENST00000543928 GGHQ92820 318 aa11.69□□□□□ -0.54
SP140-213ENST00000543928 PIGTQ969N2 578 aa11.69□□□□□ -0.54
SP140-213ENST00000543928 FGF20Q9NP95 211 aaPredicted RBP11.69□□□□□ -0.54
SP140-213ENST00000543928 TUBG2Q9NRH3 451 aa11.69□□□□□ -0.54
SP140-213ENST00000543928 PLCXD1Q9NUJ7 323 aa11.69□□□□□ -0.54
SP140-213ENST00000543928 MYEF2Q9P2K5 600 aaKnown RBP11.69□□□□□ -0.54
SP140-213ENST00000543928 USF3Q68DE3 2245 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 IGLV3-9A0A075B6K5 115 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 TMEM269A0A1B0GVZ9 245 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 A0A1W2PPW3 197 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 EFCAB10A6NFE3 127 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 METTL15A6NJ78 407 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 H3BSA7 217 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 TBX1O43435 398 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 SULT1C4O75897 302 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 DCKP27707 260 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 DCTDP32321 178 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 CDKN1AP38936 164 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 EVX1P49640 407 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 SELENOVP59797 346 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 SNRPD2P62316 118 aaKnown RBP11.68□□□□□ -0.54
SP140-213ENST00000543928 MALLQ13021 153 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 ZNF829Q3KNS6 432 aaPredicted RBP11.68□□□□□ -0.54
SP140-213ENST00000543928 TP53I3Q53FA7 332 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 ZNF684Q5T5D7 378 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 PRSS45Q7RTY3 260 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 CMBLQ96DG6 245 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 PGAM5Q96HS1 289 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 ALG8Q9BVK2 526 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 Q9H521 79 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 SP140LQ9H930 580 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 INPP5EQ9NRR6 644 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 FAM206AQ9NX38 181 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 ERVK13-1Q9NX77 482 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 CNOT2Q9NZN8 540 aaKnown RBP11.68□□□□□ -0.54
SP140-213ENST00000543928 PSORS1C1Q9UIG5 152 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 GNG8Q9UK08 70 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 ARFGEF3Q5TH69 2177 aa11.68□□□□□ -0.54
SP140-213ENST00000543928 SLC1A7O00341 560 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 DENRO43583 198 aaKnown RBP11.67□□□□□ -0.54
SP140-213ENST00000543928 RPP14O95059 124 aaKnown RBP11.67□□□□□ -0.54
SP140-213ENST00000543928 PNPP00491 289 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 IGHV3-13P01766 116 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 ADRA2AP08913 450 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 PIPP12273 146 aaPredicted RBP11.67□□□□□ -0.54
SP140-213ENST00000543928 BMP4P12644 408 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 RAC2P15153 192 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 OR12D2P58182 307 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 ACTA2P62736 377 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 ACTG2P63267 376 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 CSNK2BP67870 215 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 MFGE8Q08431 387 aaPredicted RBP11.67□□□□□ -0.54
SP140-213ENST00000543928 ST3GAL4Q11206 333 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 PSG7Q13046 419 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 GALEQ14376 348 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 GK2Q14410 553 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms