RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 BHLHE40O14503 412 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 ARPC3O15145 178 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 FTH1P19P0C7X4 201 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 SPI1P17947 270 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 MRPL19P49406 292 aaKnown RBP6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 CLDN6P56747 220 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 RPS16P62249 146 aaKnown RBP6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 FLI1Q01543 452 aaPredicted RBP6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 TNK1Q13470 666 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 ISXQ2M1V0 245 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 GLYATL3Q5SZD4 288 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 ZNF793Q6ZN11 406 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 PRSS42Q7Z5A4 293 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 KLHDC8BQ8IXV7 354 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 CLRN3Q8NCR9 226 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 OR51A2Q8NGJ7 313 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 OR52N1Q8NH53 320 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 ABHD6Q9BV23 337 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 COL25A1Q9BXS0 654 aaPredicted RBP6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 OR2B2Q9GZK3 357 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 PSORS1C1Q9UIG5 152 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 KIAA1217Q5T5P2 1943 aa6.24□□□□□ -1.41
SRGAP1-206ENST00000543397 ARPC1BO15143 372 aaKnown RBP6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 SSX4O60224 188 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 HPGDSO60760 199 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 NKX2-2O95096 273 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 CD3EP07766 207 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 LIPCP11150 499 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 GABRA1P14867 456 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 PMCHP20382 165 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 GLRA1P23415 457 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 SLC14A1Q13336 389 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 BCL2A1Q16548 175 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 LPCAT3Q6P1A2 487 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 VN1R4Q7Z5H5 301 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 D2HGDHQ8N465 521 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 TMIGD2Q96BF3 282 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 FAM234AQ9H0X4 552 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 GCM1Q9NP62 436 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 GPR173Q9NS66 373 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 KCNG2Q9UJ96 466 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 FBXO7Q9Y3I1 522 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 IGHV5-10-1A0A0J9YXX1 117 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 LOC107986453A0A1B0GWG9 222 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 SLC22A23A1A5C7 686 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 AQP7O14520 342 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 GOSR2O14653 212 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 PTP4A3O75365 173 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 ZNF133P52736 654 aaPredicted RBP6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 GLIPR1L1Q6UWM5 242 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 BCDIN3DQ7Z5W3 292 aaKnown RBP6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 ANGPTL5Q86XS5 388 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 HMGCLL1Q8TB92 370 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 OR51E1Q8TCB6 317 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 KIRREL1Q96J84 757 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 FOXB1Q99853 325 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 BCO1Q9HAY6 547 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 EXO1Q9UQ84 846 aaKnown RBP6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 PLXNB2O15031 1838 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 ACOT8O14734 319 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 SPINT1O43278 529 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 PRAF2O60831 178 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 AGFG2O95081 481 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 IGHV4-34P06331 123 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 SNRPBP14678 240 aaKnown RBP6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 POLR2GP62487 172 aaKnown RBP eCLIP6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 PRSS53Q2L4Q9 553 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 UBE2NLQ5JXB2 153 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 ENTHD1Q8IYW4 607 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 OR2L13Q8N349 312 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 OR2D3Q8NGH3 330 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 GPR119Q8TDV5 335 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 SLCO4A1Q96BD0 722 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 S1PR5Q9H228 398 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 SLC38A1Q9H2H9 487 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 SLCO5A1Q9H2Y9 848 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 CHTOPQ9Y3Y2 248 aaKnown RBP6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 TAF1LQ8IZX4 1826 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 A0A087WUJ7 227 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 APOA2P02652 100 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 LIPFP07098 398 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 PIPP12273 146 aaPredicted RBP6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 TNFRSF1AP19438 455 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 SOX8P57073 446 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 REC114Q7Z4M0 266 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 OPALINQ96PE5 141 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 EIF5A2Q9GZV4 153 aaKnown RBP6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 KIR2DS1A0A191URI9 304 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 H3BMQ9 156 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 LGALS8O00214 317 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 TUSC2O75896 110 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 SP9P0CG40 484 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 SRD5A2P31213 254 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 KIR2DS4P43632 304 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 SRP9P49458 86 aaKnown RBP6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 RPS25P62851 125 aaKnown RBP6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 KIR2DS1Q14954 304 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 EIF2S3LQ2VIR3 472 aaKnown RBP6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 ADGRE4PQ86SQ3 457 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms