RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 PPIAL4DF5H284 164 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 SURF4O15260 269 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 SOX14O95416 240 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 FSHBP01225 129 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 LCATP04180 440 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 GYPBP06028 91 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 SBK2P0C263 348 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 PPIAL4FP0DN26 164 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 CLUP10909 449 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 ZNF823P16415 610 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 SPI1P17947 270 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 BTG1P62324 171 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 GK3PQ14409 553 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 TMEM155Q4W5P6 130 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 TEX30Q5JUR7 227 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 SLC27A4Q6P1M0 643 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 ZNF771Q7L3S4 317 aaPredicted RBP11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 PEG10Q86TG7 708 aaKnown RBP11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 AQP12AQ8IXF9 295 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 ATG16L2Q8NAA4 619 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 OR2T33Q8NG76 320 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 OR10G2Q8NGC3 310 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 ST7LQ8TDW4 575 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 CANT1Q8WVQ1 401 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 SLC7A6OSQ96CW6 309 aaPredicted RBP11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 FEVQ99581 238 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 METTL17Q9H7H0 456 aaPredicted RBP11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 MMP26Q9NRE1 261 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 UBAP1Q9NZ09 502 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 METRNQ9UJH8 293 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 BAIAP2Q9UQB8 552 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 POLR3KQ9Y2Y1 108 aaPredicted RBP11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 COMMD3-BMI1R4GMX3 469 aa11.02□□□□□ -0.65
TNFRSF1A-215ENST00000543359 A0A0G2JMP0 313 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 A0A0X1KG70 313 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 ISPDA4D126 451 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 ARRDC5A6NEK1 342 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 F5H5P2 479 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 TRAPPC2LH3BP13 241 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 J3QLI3 93 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 M0R135 149 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 ZNF593O00488 134 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 TCF21O43680 179 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 VENTXO95231 258 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 HLA-DPB1P04440 258 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 SELEP16581 610 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 GATA4P43694 442 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 SLC6A9P48067 706 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 TPTEP56180 551 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 SEC61A1P61619 476 aaKnown RBP11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 MAB21L1Q13394 359 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 TUSC1Q2TAM9 212 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 SNAI3Q3KNW1 292 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 TRPM8Q7Z2W7 1104 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 BHLHE23Q8NDY6 225 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 OR4M2Q8NGB6 313 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 ZNF420Q8TAQ5 688 aaPredicted RBP11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 SLCO4A1Q96BD0 722 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 ZNF799Q96GE5 643 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 REPIN1Q9BWE0 567 aaKnown RBP11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 HCAR1Q9BXC0 346 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 PATZ1Q9HBE1 687 aaKnown RBP11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 TMEM165Q9HC07 324 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 CMC2Q9NRP2 79 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 TMEM100Q9NV29 134 aa11.01□□□□□ -0.65
TNFRSF1A-215ENST00000543359 DOCK11Q5JSL3 2073 aa11□□□□□ -0.65
TNFRSF1A-215ENST00000543359 DHRS12A0PJE2 317 aa11□□□□□ -0.65
TNFRSF1A-215ENST00000543359 FSTL3O95633 263 aa11□□□□□ -0.65
TNFRSF1A-215ENST00000543359 CST1P01037 141 aa11□□□□□ -0.65
TNFRSF1A-215ENST00000543359 ADRA2CP18825 462 aa11□□□□□ -0.65
TNFRSF1A-215ENST00000543359 FMO3P31513 532 aa11□□□□□ -0.65
TNFRSF1A-215ENST00000543359 MDH2P40926 338 aaKnown RBP11□□□□□ -0.65
TNFRSF1A-215ENST00000543359 ENTPD1P49961 510 aa11□□□□□ -0.65
TNFRSF1A-215ENST00000543359 RAD23AP54725 363 aa11□□□□□ -0.65
TNFRSF1A-215ENST00000543359 LCN2P80188 198 aa11□□□□□ -0.65
TNFRSF1A-215ENST00000543359 ZNF92Q03936 586 aa11□□□□□ -0.65
TNFRSF1A-215ENST00000543359 ZNF181Q2M3W8 571 aa11□□□□□ -0.65
TNFRSF1A-215ENST00000543359 LIPNQ5VXI9 398 aa11□□□□□ -0.65
TNFRSF1A-215ENST00000543359 DCXRQ7Z4W1 244 aa11□□□□□ -0.65
TNFRSF1A-215ENST00000543359 C1QL2Q7Z5L3 287 aa11□□□□□ -0.65
TNFRSF1A-215ENST00000543359 SPICQ8N5J4 248 aa11□□□□□ -0.65
TNFRSF1A-215ENST00000543359 IQCF1Q8N6M8 205 aa11□□□□□ -0.65
TNFRSF1A-215ENST00000543359 DEFB108BQ8NET1 73 aa11□□□□□ -0.65
TNFRSF1A-215ENST00000543359 SEMA6DQ8NFY4 1073 aa11□□□□□ -0.65
TNFRSF1A-215ENST00000543359 GIPC3Q8TF64 312 aa11□□□□□ -0.65
TNFRSF1A-215ENST00000543359 LRGUKQ96M69 825 aa11□□□□□ -0.65
TNFRSF1A-215ENST00000543359 MED20Q9H944 212 aa11□□□□□ -0.65
TNFRSF1A-215ENST00000543359 MARCH7Q9H992 704 aa11□□□□□ -0.65
TNFRSF1A-215ENST00000543359 TRRAPQ9Y4A5 3859 aa11□□□□□ -0.65
TNFRSF1A-215ENST00000543359 A0A0A6YYJ9 748 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 IGHV3-64DA0A0J9YX35 117 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 TCRBV3S1A0A5B6 114 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 CD300LBA8K4G0 201 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 CEACAM18A8MTB9 384 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 A8MXK9 166 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 IFNL4K9M1U5 179 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 FOXH1O75593 365 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 ZNF205O95201 554 aa10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 PTBP3O95758 552 aaKnown RBP10.99□□□□□ -0.65
TNFRSF1A-215ENST00000543359 CYB5R3P00387 301 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms