RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 OR1J1Q8NGS3 322 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 SLC7A6Q92536 515 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 GGHQ92820 318 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 MRPL24Q96A35 216 aaKnown RBP10.49□□□□□ -0.73
DDX55-210ENST00000543016 CNBD2Q96M20 576 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 OR10A2Q9H208 303 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 FKBP14Q9NWM8 211 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 ERVK13-1Q9NX77 482 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 SLCO1C1Q9NYB5 712 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 CGGBP1Q9UFW8 167 aaPredicted RBP10.49□□□□□ -0.73
DDX55-210ENST00000543016 LRRC42Q9Y546 428 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 LRP12Q9Y561 859 aa10.49□□□□□ -0.73
DDX55-210ENST00000543016 TMEM269A0A1B0GVZ9 245 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 A0A1W2PPR1 153 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 SLC1A7O00341 560 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 XRCC2O43543 280 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 MRPS14O60783 128 aaKnown RBP10.48□□□□□ -0.73
DDX55-210ENST00000543016 APOL3O95236 402 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 OR4A8P0C604 315 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 RAC2P15153 192 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 SELEP16581 610 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 LIPAP38571 399 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 ZNF121P58317 390 aaPredicted RBP10.48□□□□□ -0.73
DDX55-210ENST00000543016 ST3GAL4Q11206 333 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 ADIPOQQ15848 244 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 HIST2H2BCQ6DN03 193 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 FBXW12Q6X9E4 464 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 RFPL4BQ6ZWI9 263 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 SPATC1Q76KD6 591 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 STX19Q8N4C7 294 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 YIPF7Q8N8F6 280 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 SYNPRQ8TBG9 265 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 PIGTQ969N2 578 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 MARS2Q96GW9 593 aaKnown RBP10.48□□□□□ -0.73
DDX55-210ENST00000543016 TBX5Q99593 518 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 ALG8Q9BVK2 526 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 PLK3Q9H4B4 646 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 DUSP21Q9H596 190 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 UBTD1Q9HAC8 227 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 CBLN4Q9NTU7 201 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 MRM2Q9UI43 246 aaKnown RBP10.48□□□□□ -0.73
DDX55-210ENST00000543016 MYRFQ9Y2G1 1151 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 CAB39Q9Y376 341 aaPredicted RBP10.48□□□□□ -0.73
DDX55-210ENST00000543016 SNX5Q9Y5X3 404 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 R4GMQ9 66 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 SPG11Q96JI7 2443 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 UNC79Q9P2D8 2635 aa10.48□□□□□ -0.73
DDX55-210ENST00000543016 IGLV3-9A0A075B6K5 115 aa10.47□□□□□ -0.73
DDX55-210ENST00000543016 XPNPEP2O43895 674 aa10.47□□□□□ -0.73
DDX55-210ENST00000543016 ATE1O95260 518 aa10.47□□□□□ -0.73
DDX55-210ENST00000543016 NGFP01138 241 aa10.47□□□□□ -0.73
DDX55-210ENST00000543016 IGHV3-13P01766 116 aa10.47□□□□□ -0.73
DDX55-210ENST00000543016 MT-ND5P03915 603 aa10.47□□□□□ -0.73
DDX55-210ENST00000543016 ANXA2P07355 339 aaKnown RBP10.47□□□□□ -0.73
DDX55-210ENST00000543016 DANCRP0C864 163 aa10.47□□□□□ -0.73
DDX55-210ENST00000543016 PRF1P14222 555 aa10.47□□□□□ -0.73
DDX55-210ENST00000543016 KLF3P57682 345 aaPredicted RBP10.47□□□□□ -0.73
DDX55-210ENST00000543016 SNRPD2P62316 118 aaKnown RBP10.47□□□□□ -0.73
DDX55-210ENST00000543016 SLC35A2P78381 396 aa10.47□□□□□ -0.73
DDX55-210ENST00000543016 LIPNQ5VXI9 398 aa10.47□□□□□ -0.73
DDX55-210ENST00000543016 FDX2Q6P4F2 183 aa10.47□□□□□ -0.73
DDX55-210ENST00000543016 VHLLQ6RSH7 139 aa10.47□□□□□ -0.73
DDX55-210ENST00000543016 PAMR1Q6UXH9 720 aa10.47□□□□□ -0.73
DDX55-210ENST00000543016 PRSS45Q7RTY3 260 aa10.47□□□□□ -0.73
DDX55-210ENST00000543016 CCDC54Q8NEL0 328 aa10.47□□□□□ -0.73
DDX55-210ENST00000543016 SLC25A40Q8TBP6 338 aa10.47□□□□□ -0.73
DDX55-210ENST00000543016 KLF14Q8TD94 323 aaPredicted RBP10.47□□□□□ -0.73
DDX55-210ENST00000543016 NEUROG1Q92886 237 aa10.47□□□□□ -0.73
DDX55-210ENST00000543016 NINJ1Q92982 152 aa10.47□□□□□ -0.73
DDX55-210ENST00000543016 HAVCR1Q96D42 359 aa10.47□□□□□ -0.73
DDX55-210ENST00000543016 PGAM5Q96HS1 289 aa10.47□□□□□ -0.73
DDX55-210ENST00000543016 OR2J1Q9GZK6 312 aa10.47□□□□□ -0.73
DDX55-210ENST00000543016 CYSLTR2Q9NS75 346 aa10.47□□□□□ -0.73
DDX55-210ENST00000543016 NUFIP1Q9UHK0 495 aaKnown RBP10.47□□□□□ -0.73
DDX55-210ENST00000543016 STARD10Q9Y365 291 aa10.47□□□□□ -0.73
DDX55-210ENST00000543016 PCDHGB5Q9Y5G0 923 aa10.47□□□□□ -0.73
DDX55-210ENST00000543016 PMF1-BGLAPU3KQ54 211 aa10.47□□□□□ -0.73
DDX55-210ENST00000543016 A0A0U1RQV5 110 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 TMEM129A0AVI4 362 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 PRR32B1ATL7 298 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 LOC110117498-PIK3R3F6TDL0 507 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 GPRIN2O60269 458 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 RAF1P04049 648 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 CDK1P06493 297 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 LIMS3P0CW19 117 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 LIMS4P0CW20 117 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 ATP6V1B1P15313 513 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 KITLGP21583 273 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 CRHBPP24387 322 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 DDOSTP39656 456 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 SWI5Q1ZZU3 235 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 ZMAT1Q5H9K5 638 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 AHSA2Q719I0 299 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 FAM57BQ71RH2 274 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 SSX6Q7RTT6 188 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 LHFPL3Q86UP9 236 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 ZNF786Q8N393 782 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 KLHL36Q8N4N3 616 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 RFLNBQ8N5W9 214 aa10.46□□□□□ -0.73
DDX55-210ENST00000543016 OR52N1Q8NH53 320 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms