RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 ZNF841Q6ZN19 808 aa16.58■□□□□ 0.24
DDX11-220ENST00000542244 PARP8Q8N3A8 854 aa16.58■□□□□ 0.24
DDX11-220ENST00000542244 CYB561A3Q8NBI2 242 aa16.58■□□□□ 0.24
DDX11-220ENST00000542244 OR52E2Q8NGJ4 325 aa16.58■□□□□ 0.24
DDX11-220ENST00000542244 OR5L1Q8NGL2 311 aa16.58■□□□□ 0.24
DDX11-220ENST00000542244 ZNF747Q9BV97 191 aa16.58■□□□□ 0.24
DDX11-220ENST00000542244 UFSP2Q9NUQ7 469 aa16.58■□□□□ 0.24
DDX11-220ENST00000542244 TMEM100Q9NV29 134 aa16.58■□□□□ 0.24
DDX11-220ENST00000542244 CD300AQ9UGN4 299 aa16.58■□□□□ 0.24
DDX11-220ENST00000542244 LRCH1Q9Y2L9 728 aa16.58■□□□□ 0.24
DDX11-220ENST00000542244 TVP23AA6NH52 213 aa16.57■□□□□ 0.24
DDX11-220ENST00000542244 ARPC2O15144 300 aa16.57■□□□□ 0.24
DDX11-220ENST00000542244 OR10H3O60404 316 aa16.57■□□□□ 0.24
DDX11-220ENST00000542244 FAM20BO75063 409 aa16.57■□□□□ 0.24
DDX11-220ENST00000542244 RENP00797 406 aa16.57■□□□□ 0.24
DDX11-220ENST00000542244 LCATP04180 440 aa16.57■□□□□ 0.24
DDX11-220ENST00000542244 RRM2P31350 389 aa16.57■□□□□ 0.24
DDX11-220ENST00000542244 RAD23AP54725 363 aa16.57■□□□□ 0.24
DDX11-220ENST00000542244 GNB2P62879 340 aa16.57■□□□□ 0.24
DDX11-220ENST00000542244 KRT72Q14CN4 511 aa16.57■□□□□ 0.24
DDX11-220ENST00000542244 ZNF362Q5T0B9 420 aaPredicted RBP16.57■□□□□ 0.24
DDX11-220ENST00000542244 PGBD2Q6P3X8 592 aa16.57■□□□□ 0.24
DDX11-220ENST00000542244 DNM1P34Q6PK57 102 aa16.57■□□□□ 0.24
DDX11-220ENST00000542244 MUC20Q8N307 709 aaPredicted RBP16.57■□□□□ 0.24
DDX11-220ENST00000542244 OR8D4Q8NGM9 314 aa16.57■□□□□ 0.24
DDX11-220ENST00000542244 OR2AE1Q8NHA4 323 aa16.57■□□□□ 0.24
DDX11-220ENST00000542244 RAB40AQ8WXH6 277 aa16.57■□□□□ 0.24
DDX11-220ENST00000542244 UPRTQ96BW1 309 aa16.57■□□□□ 0.24
DDX11-220ENST00000542244 CMTM5Q96DZ9 223 aa16.57■□□□□ 0.24
DDX11-220ENST00000542244 TMCC3Q9ULS5 477 aa16.57■□□□□ 0.24
DDX11-220ENST00000542244 TRRAPQ9Y4A5 3859 aa16.57■□□□□ 0.24
DDX11-220ENST00000542244 PKD1L1Q8TDX9 2849 aa16.56■□□□□ 0.24
DDX11-220ENST00000542244 TRAV40A0A0B4J280 105 aa16.56■□□□□ 0.24
DDX11-220ENST00000542244 C22orf46C9J442 243 aa16.56■□□□□ 0.24
DDX11-220ENST00000542244 NDUFAB1O14561 156 aa16.56■□□□□ 0.24
DDX11-220ENST00000542244 FCN3O75636 299 aa16.56■□□□□ 0.24
DDX11-220ENST00000542244 PLATP00750 562 aa16.56■□□□□ 0.24
DDX11-220ENST00000542244 PRDX6P30041 224 aa16.56■□□□□ 0.24
DDX11-220ENST00000542244 ZNF92Q03936 586 aa16.56■□□□□ 0.24
DDX11-220ENST00000542244 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.56■□□□□ 0.24
DDX11-220ENST00000542244 RBMS3Q6XE24 437 aaKnown RBP16.56■□□□□ 0.24
DDX11-220ENST00000542244 BRD3OSQ6XYD6 125 aa16.56■□□□□ 0.24
DDX11-220ENST00000542244 ZNF620Q6ZNG0 422 aa16.56■□□□□ 0.24
DDX11-220ENST00000542244 OR9Q2Q8NGE9 314 aa16.56■□□□□ 0.24
DDX11-220ENST00000542244 OR51L1Q8NGJ5 315 aa16.56■□□□□ 0.24
DDX11-220ENST00000542244 SGMS2Q8NHU3 365 aa16.56■□□□□ 0.24
DDX11-220ENST00000542244 NEIL1Q96FI4 390 aaPredicted RBP16.56■□□□□ 0.24
DDX11-220ENST00000542244 ATF6BQ99941 703 aa16.56■□□□□ 0.24
DDX11-220ENST00000542244 MS4A7Q9GZW8 240 aaPredicted RBP16.56■□□□□ 0.24
DDX11-220ENST00000542244 ARL8BQ9NVJ2 186 aa16.56■□□□□ 0.24
DDX11-220ENST00000542244 CTSZQ9UBR2 303 aa16.56■□□□□ 0.24
DDX11-220ENST00000542244 HLA-DQA2P01906 255 aa16.55■□□□□ 0.24
DDX11-220ENST00000542244 CA6P23280 308 aa16.55■□□□□ 0.24
DDX11-220ENST00000542244 PITPNBP48739 271 aa16.55■□□□□ 0.24
DDX11-220ENST00000542244 PPP1R8Q12972 351 aaKnown RBP16.55■□□□□ 0.24
DDX11-220ENST00000542244 ZNF181Q2M3W8 571 aa16.55■□□□□ 0.24
DDX11-220ENST00000542244 PGM2L1Q6PCE3 622 aa16.55■□□□□ 0.24
DDX11-220ENST00000542244 FITM2Q8N6M3 262 aa16.55■□□□□ 0.24
DDX11-220ENST00000542244 ZMYND19Q96E35 227 aaPredicted RBP16.55■□□□□ 0.24
DDX11-220ENST00000542244 CDRT15Q96T59 188 aa16.55■□□□□ 0.24
DDX11-220ENST00000542244 BTBD10Q9BSF8 475 aa16.55■□□□□ 0.24
DDX11-220ENST00000542244 HCAR1Q9BXC0 346 aa16.55■□□□□ 0.24
DDX11-220ENST00000542244 UNKLQ9H9P5 680 aaKnown RBP16.55■□□□□ 0.24
DDX11-220ENST00000542244 MIOXQ9UGB7 285 aa16.55■□□□□ 0.24
DDX11-220ENST00000542244 KIR2DS1A0A191URI9 304 aa16.54■□□□□ 0.24
DDX11-220ENST00000542244 C3orf80F5H4A9 247 aa16.54■□□□□ 0.24
DDX11-220ENST00000542244 BHLHE40O14503 412 aa16.54■□□□□ 0.24
DDX11-220ENST00000542244 SNX3O60493 162 aa16.54■□□□□ 0.24
DDX11-220ENST00000542244 RNASE1P07998 156 aaKnown RBP16.54■□□□□ 0.24
DDX11-220ENST00000542244 HSD17B1P14061 328 aa16.54■□□□□ 0.24
DDX11-220ENST00000542244 OMGP23515 440 aa16.54■□□□□ 0.24
DDX11-220ENST00000542244 CD200P41217 278 aa16.54■□□□□ 0.24
DDX11-220ENST00000542244 GATA4P43694 442 aa16.54■□□□□ 0.24
DDX11-220ENST00000542244 FGF12P61328 243 aa16.54■□□□□ 0.24
DDX11-220ENST00000542244 ELF3P78545 371 aaPredicted RBP16.54■□□□□ 0.24
DDX11-220ENST00000542244 FOXL1Q12952 345 aa16.54■□□□□ 0.24
DDX11-220ENST00000542244 DEFB112Q30KQ8 113 aa16.54■□□□□ 0.24
DDX11-220ENST00000542244 HSP90B2PQ58FF3 399 aa16.54■□□□□ 0.24
DDX11-220ENST00000542244 WDR25Q64LD2 544 aaPredicted RBP16.54■□□□□ 0.24
DDX11-220ENST00000542244 RUSC1-AS1Q66K80 236 aa16.54■□□□□ 0.24
DDX11-220ENST00000542244 SFRP4Q6FHJ7 346 aaPredicted RBP16.54■□□□□ 0.24
DDX11-220ENST00000542244 BOLLQ8N9W6 283 aaKnown RBP16.54■□□□□ 0.24
DDX11-220ENST00000542244 OR9Q1Q8NGQ5 310 aa16.54■□□□□ 0.24
DDX11-220ENST00000542244 GNPDA2Q8TDQ7 276 aa16.54■□□□□ 0.24
DDX11-220ENST00000542244 NUDT16L1Q9BRJ7 211 aaKnown RBP16.54■□□□□ 0.24
DDX11-220ENST00000542244 RASSF4Q9H2L5 321 aa16.54■□□□□ 0.24
DDX11-220ENST00000542244 KRCC1Q9NPI7 259 aaPredicted RBP16.54■□□□□ 0.24
DDX11-220ENST00000542244 VNN3Q9NY84 501 aa16.54■□□□□ 0.24
DDX11-220ENST00000542244 IFNL4K9M1U5 179 aa16.53■□□□□ 0.24
DDX11-220ENST00000542244 FABP3P05413 133 aa16.53■□□□□ 0.24
DDX11-220ENST00000542244 SFTPBP07988 381 aa16.53■□□□□ 0.24
DDX11-220ENST00000542244 SLC2A1P11166 492 aa16.53■□□□□ 0.24
DDX11-220ENST00000542244 NOS3P29474 1203 aa16.53■□□□□ 0.24
DDX11-220ENST00000542244 GYS2P54840 703 aa16.53■□□□□ 0.24
DDX11-220ENST00000542244 SRSF4Q08170 494 aaKnown RBP16.53■□□□□ 0.24
DDX11-220ENST00000542244 TSPAN31Q12999 210 aa16.53■□□□□ 0.24
DDX11-220ENST00000542244 GLYATL3Q5SZD4 288 aa16.53■□□□□ 0.24
DDX11-220ENST00000542244 LRRN1Q6UXK5 716 aa16.53■□□□□ 0.24
DDX11-220ENST00000542244 ZNF826PQ6ZT77 177 aa16.53■□□□□ 0.24
DDX11-220ENST00000542244 C9orf139Q6ZV77 190 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms