RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 MKKSQ9NPJ1 570 aaPredicted RBP8.17□□□□□ -1.1
THBS3-211ENST00000541990 OR2S2Q9NQN1 319 aa8.17□□□□□ -1.1
THBS3-211ENST00000541990 FGF21Q9NSA1 209 aa8.17□□□□□ -1.1
THBS3-211ENST00000541990 MIOXQ9UGB7 285 aa8.17□□□□□ -1.1
THBS3-211ENST00000541990 LAMP5Q9UJQ1 280 aa8.17□□□□□ -1.1
THBS3-211ENST00000541990 MRPS18BQ9Y676 258 aaKnown RBP8.17□□□□□ -1.1
THBS3-211ENST00000541990 FAM186AA6NE01 2351 aa8.17□□□□□ -1.1
THBS3-211ENST00000541990 MGAQ8IWI9 3026 aa8.17□□□□□ -1.1
THBS3-211ENST00000541990 LOC100289279A0A1B0GTE1 492 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 ZNF208O43345 1280 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 TXNL1O43396 289 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 CDC40O60508 579 aaKnown RBP eCLIP8.16□□□□□ -1.1
THBS3-211ENST00000541990 SNAPINO95295 136 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 CD74P04233 296 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 CCL4P13236 92 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 ZNF44P15621 663 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 SDHAP31040 664 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 MAP3K8P41279 467 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 HAAOP46952 286 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 NR0B1P51843 470 aaKnown RBP8.16□□□□□ -1.1
THBS3-211ENST00000541990 ECH1Q13011 328 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 SLC35D3Q5M8T2 416 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 ACER2Q5QJU3 275 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 NAA40Q86UY6 237 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 C17orf82Q86X59 251 aaPredicted RBP8.16□□□□□ -1.1
THBS3-211ENST00000541990 MISPQ8IVT2 679 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 GPR148Q8TDV2 347 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 THAP3Q8WTV1 239 aaPredicted RBP8.16□□□□□ -1.1
THBS3-211ENST00000541990 ISOC2Q96AB3 205 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 ZNF775Q96BV0 537 aaPredicted RBP8.16□□□□□ -1.1
THBS3-211ENST00000541990 C4orf45Q96LM5 186 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 RSRP1Q9BUV0 290 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 EDEM2Q9BV94 578 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 TAS2R4Q9NYW5 299 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 RCC2Q9P258 522 aaKnown RBP8.16□□□□□ -1.1
THBS3-211ENST00000541990 SLC22A7Q9Y694 548 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 FER1L5A0AVI2 2057 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 LNP1A1A4G5 178 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 C9orf170A2RU37 121 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 DCDC2BA2VCK2 349 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 ZNF736B4DX44 427 aaPredicted RBP8.16□□□□□ -1.1
THBS3-211ENST00000541990 LMX1BO60663 402 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 AKR1C4P17516 323 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 PTAFRP25105 342 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 MPLP40238 635 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 RBM34P42696 430 aaKnown RBP8.16□□□□□ -1.1
THBS3-211ENST00000541990 GABRA4P48169 554 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 SRSF4Q08170 494 aaKnown RBP8.16□□□□□ -1.1
THBS3-211ENST00000541990 MFGE8Q08431 387 aaPredicted RBP8.16□□□□□ -1.1
THBS3-211ENST00000541990 MESTQ5EB52 335 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 JAZF1Q86VZ6 243 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 C10orf53Q8N6V4 93 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 INO80EQ8NBZ0 244 aaPredicted RBP8.16□□□□□ -1.1
THBS3-211ENST00000541990 ZNF417Q8TAU3 575 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 SLC22A8Q8TCC7 542 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 ANKRD9Q96BM1 317 aaPredicted RBP8.16□□□□□ -1.1
THBS3-211ENST00000541990 OR6C1Q96RD1 312 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 PNO1Q9NRX1 252 aaKnown RBP8.16□□□□□ -1.1
THBS3-211ENST00000541990 TMEM100Q9NV29 134 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 PCDHGA1Q9Y5H4 931 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 FAM221BA6H8Z2 402 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 C5orf52A6NGY3 159 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 TTLL8A6PVC2 850 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 SLC17A2O00624 439 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 ARPC3O15145 178 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 NUDT21O43809 227 aaKnown RBP8.16□□□□□ -1.1
THBS3-211ENST00000541990 OR10H2O60403 315 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 MELTFP08582 738 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 SFTA3P0C7M3 94 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 SERPINF1P36955 418 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 CTXN1P60606 82 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 ACTBP60709 375 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 ACTG1P63261 375 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 PEA15Q15121 130 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 GLYATL3Q5SZD4 288 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 LANCL3Q6ZV70 420 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 LYG2Q86SG7 212 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 PRR22Q8IZ63 422 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 TMEM229BQ8NBD8 167 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 OR4K17Q8NGC6 315 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 NT5CQ8TCD5 201 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 SLC41A2Q96JW4 573 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 SERINC2Q96SA4 455 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 RNF126Q9BV68 326 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 SEC11CQ9BY50 192 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 SYT4Q9H2B2 425 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 RHOFQ9HBH0 211 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 UPB1Q9UBR1 384 aa8.16□□□□□ -1.1
THBS3-211ENST00000541990 RPH3AQ9Y2J0 694 aaPredicted RBP8.16□□□□□ -1.1
THBS3-211ENST00000541990 C5orf51A6NDU8 294 aa8.15□□□□□ -1.1
THBS3-211ENST00000541990 TLCD2A6NGC4 264 aa8.15□□□□□ -1.1
THBS3-211ENST00000541990 EFCAB7A8K855 629 aa8.15□□□□□ -1.1
THBS3-211ENST00000541990 F8VVB4 439 aa8.15□□□□□ -1.1
THBS3-211ENST00000541990 F8VWA3 439 aa8.15□□□□□ -1.1
THBS3-211ENST00000541990 OIP5O43482 229 aa8.15□□□□□ -1.1
THBS3-211ENST00000541990 DUX1O43812 170 aa8.15□□□□□ -1.1
THBS3-211ENST00000541990 CYB5AP00167 134 aa8.15□□□□□ -1.1
THBS3-211ENST00000541990 TACSTD2P09758 323 aa8.15□□□□□ -1.1
THBS3-211ENST00000541990 DAOP14920 347 aa8.15□□□□□ -1.1
THBS3-211ENST00000541990 RCC1P18754 421 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms