RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 PPP1R1CQ8WVI7 109 aa11.15□□□□□ -0.62
RNF4-222ENST00000541204 OIT3Q8WWZ8 545 aa11.15□□□□□ -0.62
RNF4-222ENST00000541204 EDAQ92838 391 aa11.15□□□□□ -0.62
RNF4-222ENST00000541204 CMBLQ96DG6 245 aa11.15□□□□□ -0.62
RNF4-222ENST00000541204 WDR77Q9BQA1 342 aaPredicted RBP11.15□□□□□ -0.62
RNF4-222ENST00000541204 EDEM2Q9BV94 578 aa11.15□□□□□ -0.62
RNF4-222ENST00000541204 ZNF471Q9BX82 626 aaPredicted RBP11.15□□□□□ -0.62
RNF4-222ENST00000541204 SMOC1Q9H4F8 434 aa11.15□□□□□ -0.62
RNF4-222ENST00000541204 MED29Q9NX70 200 aa11.15□□□□□ -0.62
RNF4-222ENST00000541204 HHLA2Q9UM44 414 aa11.15□□□□□ -0.62
RNF4-222ENST00000541204 PLEKHA6Q9Y2H5 1048 aa11.15□□□□□ -0.62
RNF4-222ENST00000541204 CNTRLQ7Z7A1 2325 aa11.15□□□□□ -0.62
RNF4-222ENST00000541204 ADAM10O14672 748 aa11.15□□□□□ -0.63
RNF4-222ENST00000541204 LDLRAD4O15165 306 aa11.15□□□□□ -0.63
RNF4-222ENST00000541204 NPIPB7O75200 414 aa11.15□□□□□ -0.63
RNF4-222ENST00000541204 MT-ATP6P00846 226 aa11.15□□□□□ -0.63
RNF4-222ENST00000541204 NAT1P18440 290 aa11.15□□□□□ -0.63
RNF4-222ENST00000541204 CAPZA1P52907 286 aa11.15□□□□□ -0.63
RNF4-222ENST00000541204 ATP1B3P54709 279 aa11.15□□□□□ -0.63
RNF4-222ENST00000541204 SLC26A5P58743 744 aa11.15□□□□□ -0.63
RNF4-222ENST00000541204 GLO1Q04760 184 aa11.15□□□□□ -0.63
RNF4-222ENST00000541204 FOXF1Q12946 379 aa11.15□□□□□ -0.63
RNF4-222ENST00000541204 CDNFQ49AH0 187 aa11.15□□□□□ -0.63
RNF4-222ENST00000541204 SLC22A6Q4U2R8 563 aa11.15□□□□□ -0.63
RNF4-222ENST00000541204 GVQW1Q8N7I0 195 aa11.15□□□□□ -0.63
RNF4-222ENST00000541204 IFI44Q8TCB0 444 aa11.15□□□□□ -0.63
RNF4-222ENST00000541204 LRRC46Q96FV0 321 aa11.15□□□□□ -0.63
RNF4-222ENST00000541204 SLCO5A1Q9H2Y9 848 aa11.15□□□□□ -0.63
RNF4-222ENST00000541204 COMMD9Q9P000 198 aa11.15□□□□□ -0.63
RNF4-222ENST00000541204 WIPF3A6NGB9 483 aa11.14□□□□□ -0.63
RNF4-222ENST00000541204 FAM25EA8MYX2 175 aa11.14□□□□□ -0.63
RNF4-222ENST00000541204 SRSF10O75494 262 aaKnown RBP11.14□□□□□ -0.63
RNF4-222ENST00000541204 DXOO77932 396 aaKnown RBP11.14□□□□□ -0.63
RNF4-222ENST00000541204 CELA2AP08217 269 aa11.14□□□□□ -0.63
RNF4-222ENST00000541204 CXADRP78310 365 aa11.14□□□□□ -0.63
RNF4-222ENST00000541204 OR52W1Q6IF63 320 aa11.14□□□□□ -0.63
RNF4-222ENST00000541204 EMC6Q9BV81 110 aa11.14□□□□□ -0.63
RNF4-222ENST00000541204 MYOZ1Q9NP98 299 aaPredicted RBP11.14□□□□□ -0.63
RNF4-222ENST00000541204 G6PC2Q9NQR9 355 aa11.14□□□□□ -0.63
RNF4-222ENST00000541204 R4GMQ9 66 aa11.14□□□□□ -0.63
RNF4-222ENST00000541204 IGLV3-12A0A075B6K2 115 aa11.14□□□□□ -0.63
RNF4-222ENST00000541204 RNF222A6NCQ9 220 aa11.14□□□□□ -0.63
RNF4-222ENST00000541204 DNASE2O00115 360 aaPredicted RBP11.14□□□□□ -0.63
RNF4-222ENST00000541204 TOX3O15405 576 aaPredicted RBP11.14□□□□□ -0.63
RNF4-222ENST00000541204 KCNAB3O43448 404 aa11.14□□□□□ -0.63
RNF4-222ENST00000541204 DLSTP36957 453 aa11.14□□□□□ -0.63
RNF4-222ENST00000541204 C17orf67Q0P5P2 114 aa11.14□□□□□ -0.63
RNF4-222ENST00000541204 PPP1R1AQ13522 171 aa11.14□□□□□ -0.63
RNF4-222ENST00000541204 MOB3CQ70IA8 216 aa11.14□□□□□ -0.63
RNF4-222ENST00000541204 RHOUQ7L0Q8 258 aa11.14□□□□□ -0.63
RNF4-222ENST00000541204 DCXRQ7Z4W1 244 aa11.14□□□□□ -0.63
RNF4-222ENST00000541204 CPEB2Q7Z5Q1 589 aaKnown RBP11.14□□□□□ -0.63
RNF4-222ENST00000541204 FJX1Q86VR8 437 aa11.14□□□□□ -0.63
RNF4-222ENST00000541204 IQCF2Q8IXL9 164 aa11.14□□□□□ -0.63
RNF4-222ENST00000541204 BPIFCQ8NFQ6 507 aa11.14□□□□□ -0.63
RNF4-222ENST00000541204 MRGPRFQ96AM1 343 aa11.14□□□□□ -0.63
RNF4-222ENST00000541204 NARS2Q96I59 477 aaKnown RBP11.14□□□□□ -0.63
RNF4-222ENST00000541204 C5orf34Q96MH7 638 aa11.14□□□□□ -0.63
RNF4-222ENST00000541204 SPSB2Q99619 263 aa11.14□□□□□ -0.63
RNF4-222ENST00000541204 CST11Q9H112 138 aa11.14□□□□□ -0.63
RNF4-222ENST00000541204 METTL7AQ9H8H3 244 aa11.14□□□□□ -0.63
RNF4-222ENST00000541204 OR52A1Q9UKL2 312 aa11.14□□□□□ -0.63
RNF4-222ENST00000541204 CELSR3Q9NYQ7 3312 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 A0A1B0GW55 424 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 OR14I1A6ND48 311 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 DISC1C4P0D8 188 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 MASP2O00187 686 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 P2RY10O00398 339 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 BCL2L11O43521 198 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 OR2F2O95006 317 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 DUX4L2P0CJ85 424 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 DUX4L3P0CJ86 424 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 DUX4L4P0CJ87 422 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 DUX4L5P0CJ88 424 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 DUX4L6P0CJ89 424 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 DUX4L7P0CJ90 424 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 CNR1P21554 472 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 AVPR2P30518 371 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 POU3F1Q03052 451 aaPredicted RBP11.13□□□□□ -0.63
RNF4-222ENST00000541204 OR2F1Q13607 317 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 PRAMEF20Q5VT98 475 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 TRAPPC6BQ86SZ2 158 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 ESX1Q8N693 406 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 TMEM234Q8WY98 164 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 FAM46BQ96A09 425 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 IFT46Q9NQC8 304 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 PPP4R1LQ9P1A2 415 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 DUX4Q9UBX2 424 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 GDF2Q9UK05 429 aaPredicted RBP11.13□□□□□ -0.63
RNF4-222ENST00000541204 CPAMD8Q8IZJ3 1885 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 TMEM269A0A1B0GVZ9 245 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 FAM74A7A6NL05 159 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 EIF1AYO14602 144 aaKnown RBP11.13□□□□□ -0.63
RNF4-222ENST00000541204 CD37P11049 281 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 CCL4P13236 92 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 MC2RQ01718 297 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 ZNF345Q14585 488 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 FAM74A3Q4VXF1 159 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 CCDC157Q569K6 752 aa11.13□□□□□ -0.63
RNF4-222ENST00000541204 RNASE10Q5GAN6 216 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms