RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 HAVCR1Q96D42 359 aa16.11■□□□□ 0.17
VPS33A-205ENST00000541169 DIRC2Q96SL1 478 aa16.11■□□□□ 0.17
VPS33A-205ENST00000541169 OR51B6Q9H340 312 aa16.11■□□□□ 0.17
VPS33A-205ENST00000541169 STARD10Q9Y365 291 aa16.11■□□□□ 0.17
VPS33A-205ENST00000541169 PDZD2O15018 2839 aa16.11■□□□□ 0.17
VPS33A-205ENST00000541169 AKAP6Q13023 2319 aa16.11■□□□□ 0.17
VPS33A-205ENST00000541169 SULT1C4O75897 302 aa16.1■□□□□ 0.17
VPS33A-205ENST00000541169 FADS2O95864 444 aaKnown RBP16.1■□□□□ 0.17
VPS33A-205ENST00000541169 MRPL3P09001 348 aaKnown RBP16.1■□□□□ 0.17
VPS33A-205ENST00000541169 KITLGP21583 273 aa16.1■□□□□ 0.17
VPS33A-205ENST00000541169 CX3CR1P49238 355 aa16.1■□□□□ 0.17
VPS33A-205ENST00000541169 EFNA4P52798 201 aa16.1■□□□□ 0.17
VPS33A-205ENST00000541169 ART1P52961 327 aa16.1■□□□□ 0.17
VPS33A-205ENST00000541169 ATP5J2P56134 94 aa16.1■□□□□ 0.17
VPS33A-205ENST00000541169 CXCR4P61073 352 aa16.1■□□□□ 0.17
VPS33A-205ENST00000541169 MAD2L1BPQ15013 274 aaPredicted RBP16.1■□□□□ 0.17
VPS33A-205ENST00000541169 SNCBQ16143 134 aa16.1■□□□□ 0.17
VPS33A-205ENST00000541169 ZNF829Q3KNS6 432 aaPredicted RBP16.1■□□□□ 0.17
VPS33A-205ENST00000541169 PCGF3Q3KNV8 242 aa16.1■□□□□ 0.17
VPS33A-205ENST00000541169 ZNF322Q6U7Q0 402 aaPredicted RBP16.1■□□□□ 0.17
VPS33A-205ENST00000541169 TFAP2CQ92754 450 aa16.1■□□□□ 0.17
VPS33A-205ENST00000541169 OR8B4Q96RC9 309 aa16.1■□□□□ 0.17
VPS33A-205ENST00000541169 SYT3Q9BQG1 590 aa16.1■□□□□ 0.17
VPS33A-205ENST00000541169 INPP5EQ9NRR6 644 aa16.1■□□□□ 0.17
VPS33A-205ENST00000541169 MRPS18AQ9NVS2 196 aaKnown RBP16.1■□□□□ 0.17
VPS33A-205ENST00000541169 ZDHHC8Q9ULC8 765 aa16.1■□□□□ 0.17
VPS33A-205ENST00000541169 NBPF19A0A087WUL8 3843 aa16.09■□□□□ 0.17
VPS33A-205ENST00000541169 CSF3P09919 207 aa16.09■□□□□ 0.17
VPS33A-205ENST00000541169 PRKXP51817 358 aa16.09■□□□□ 0.17
VPS33A-205ENST00000541169 RIDAP52758 137 aaKnown RBP16.09■□□□□ 0.17
VPS33A-205ENST00000541169 DSCR9P59020 149 aa16.09■□□□□ 0.17
VPS33A-205ENST00000541169 PSMA6P60900 246 aaKnown RBP16.09■□□□□ 0.17
VPS33A-205ENST00000541169 CSNK2BP67870 215 aa16.09■□□□□ 0.17
VPS33A-205ENST00000541169 PLEKHG7Q6ZR37 379 aa16.09■□□□□ 0.17
VPS33A-205ENST00000541169 NRG4Q8WWG1 115 aa16.09■□□□□ 0.17
VPS33A-205ENST00000541169 RNFT2Q96EX2 444 aa16.09■□□□□ 0.17
VPS33A-205ENST00000541169 OR10A2Q9H208 303 aa16.09■□□□□ 0.17
VPS33A-205ENST00000541169 RASSF4Q9H2L5 321 aa16.09■□□□□ 0.17
VPS33A-205ENST00000541169 NKIRAS2Q9NYR9 191 aa16.09■□□□□ 0.17
VPS33A-205ENST00000541169 EXOGQ9Y2C4 368 aaKnown RBP16.09■□□□□ 0.17
VPS33A-205ENST00000541169 NOP16Q9Y3C1 178 aaKnown RBP16.09■□□□□ 0.17
VPS33A-205ENST00000541169 POLQO75417 2590 aa16.09■□□□□ 0.17
VPS33A-205ENST00000541169 RTTNQ86VV8 2226 aa16.09■□□□□ 0.17
VPS33A-205ENST00000541169 F12P00748 615 aaPredicted RBP16.08■□□□□ 0.16
VPS33A-205ENST00000541169 KRT8P05787 483 aa16.08■□□□□ 0.16
VPS33A-205ENST00000541169 TACSTD2P09758 323 aa16.08■□□□□ 0.16
VPS33A-205ENST00000541169 DBTP11182 482 aaKnown RBP16.08■□□□□ 0.16
VPS33A-205ENST00000541169 CDKN1AP38936 164 aa16.08■□□□□ 0.16
VPS33A-205ENST00000541169 MMP16P51512 607 aa16.08■□□□□ 0.16
VPS33A-205ENST00000541169 ISL1P61371 349 aa16.08■□□□□ 0.16
VPS33A-205ENST00000541169 ERVS71-1P61550 626 aa16.08■□□□□ 0.16
VPS33A-205ENST00000541169 SPATA46Q5T0L3 261 aa16.08■□□□□ 0.16
VPS33A-205ENST00000541169 ACBD7Q8N6N7 88 aa16.08■□□□□ 0.16
VPS33A-205ENST00000541169 OR10H4Q8NGA5 316 aa16.08■□□□□ 0.16
VPS33A-205ENST00000541169 HAVCR2Q8TDQ0 301 aa16.08■□□□□ 0.16
VPS33A-205ENST00000541169 AMELYQ99218 206 aa16.08■□□□□ 0.16
VPS33A-205ENST00000541169 VRK1Q99986 396 aaPredicted RBP16.08■□□□□ 0.16
VPS33A-205ENST00000541169 MOB1AQ9H8S9 216 aa16.08■□□□□ 0.16
VPS33A-205ENST00000541169 TAAR3PQ9P1P4 343 aa16.08■□□□□ 0.16
VPS33A-205ENST00000541169 IKZF2Q9UKS7 526 aa16.08■□□□□ 0.16
VPS33A-205ENST00000541169 LRP12Q9Y561 859 aa16.08■□□□□ 0.16
VPS33A-205ENST00000541169 TIMM8AO60220 97 aaPredicted RBP16.07■□□□□ 0.16
VPS33A-205ENST00000541169 ANXA2P07355 339 aaKnown RBP16.07■□□□□ 0.16
VPS33A-205ENST00000541169 ADH4P08319 380 aa16.07■□□□□ 0.16
VPS33A-205ENST00000541169 ADRA2AP08913 450 aa16.07■□□□□ 0.16
VPS33A-205ENST00000541169 DDOSTP39656 456 aa16.07■□□□□ 0.16
VPS33A-205ENST00000541169 ACTA2P62736 377 aa16.07■□□□□ 0.16
VPS33A-205ENST00000541169 ACTG2P63267 376 aa16.07■□□□□ 0.16
VPS33A-205ENST00000541169 ZNF91Q05481 1191 aa16.07■□□□□ 0.16
VPS33A-205ENST00000541169 PSG7Q13046 419 aa16.07■□□□□ 0.16
VPS33A-205ENST00000541169 MSMPQ1L6U9 139 aa16.07■□□□□ 0.16
VPS33A-205ENST00000541169 LRRN1Q6UXK5 716 aa16.07■□□□□ 0.16
VPS33A-205ENST00000541169 SPNS3Q6ZMD2 512 aa16.07■□□□□ 0.16
VPS33A-205ENST00000541169 USP51Q70EK9 711 aa16.07■□□□□ 0.16
VPS33A-205ENST00000541169 PGAP1Q75T13 922 aa16.07■□□□□ 0.16
VPS33A-205ENST00000541169 SPATC1Q76KD6 591 aa16.07■□□□□ 0.16
VPS33A-205ENST00000541169 MRPL21Q7Z2W9 205 aaKnown RBP16.07■□□□□ 0.16
VPS33A-205ENST00000541169 SPSB4Q96A44 273 aa16.07■□□□□ 0.16
VPS33A-205ENST00000541169 CMBLQ96DG6 245 aa16.07■□□□□ 0.16
VPS33A-205ENST00000541169 PERPQ96FX8 193 aa16.07■□□□□ 0.16
VPS33A-205ENST00000541169 SLC22A4Q9H015 551 aa16.07■□□□□ 0.16
VPS33A-205ENST00000541169 PURGQ9UJV8 347 aaKnown RBP16.07■□□□□ 0.16
VPS33A-205ENST00000541169 KLHDC2Q9Y2U9 406 aa16.07■□□□□ 0.16
VPS33A-205ENST00000541169 TMEM269A0A1B0GVZ9 245 aa16.06■□□□□ 0.16
VPS33A-205ENST00000541169 A0A1W2PQL4 384 aaPredicted RBP16.06■□□□□ 0.16
VPS33A-205ENST00000541169 DAPL1A0PJW8 107 aa16.06■□□□□ 0.16
VPS33A-205ENST00000541169 C17orf100A8MU93 164 aa16.06■□□□□ 0.16
VPS33A-205ENST00000541169 WBP4O75554 376 aaKnown RBP16.06■□□□□ 0.16
VPS33A-205ENST00000541169 CLPTM1O96005 669 aa16.06■□□□□ 0.16
VPS33A-205ENST00000541169 MPV17P39210 176 aa16.06■□□□□ 0.16
VPS33A-205ENST00000541169 VHLP40337 213 aa16.06■□□□□ 0.16
VPS33A-205ENST00000541169 HCCSP53701 268 aa16.06■□□□□ 0.16
VPS33A-205ENST00000541169 ZNF121P58317 390 aaPredicted RBP16.06■□□□□ 0.16
VPS33A-205ENST00000541169 MRPS11P82912 194 aaKnown RBP16.06■□□□□ 0.16
VPS33A-205ENST00000541169 MED21Q13503 144 aa16.06■□□□□ 0.16
VPS33A-205ENST00000541169 GK2Q14410 553 aaPredicted RBP16.06■□□□□ 0.16
VPS33A-205ENST00000541169 PRSS45Q7RTY3 260 aa16.06■□□□□ 0.16
VPS33A-205ENST00000541169 FAM220AQ7Z4H9 259 aa16.06■□□□□ 0.16
VPS33A-205ENST00000541169 THAP5Q7Z6K1 395 aa16.06■□□□□ 0.16
VPS33A-205ENST00000541169 LRP11Q86VZ4 500 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms