RNA–Protein interactions for RNA: ENST00000541108.1

CLIP1-215, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-215ENST00000541108 CPEB3Q8NE35 698 aaKnown RBP15.46■□□□□ 0.07
CLIP1-215ENST00000541108 OR8B12Q8NGG6 310 aa15.46■□□□□ 0.07
CLIP1-215ENST00000541108 OR51A4Q8NGJ6 313 aa15.46■□□□□ 0.07
CLIP1-215ENST00000541108 OR10AC1Q8NH08 325 aa15.46■□□□□ 0.07
CLIP1-215ENST00000541108 ASB5Q8WWX0 329 aa15.46■□□□□ 0.07
CLIP1-215ENST00000541108 SLC7A6Q92536 515 aa15.46■□□□□ 0.07
CLIP1-215ENST00000541108 NXF2Q9GZY0 626 aaKnown RBP15.46■□□□□ 0.07
CLIP1-215ENST00000541108 OPN3Q9H1Y3 402 aaPredicted RBP15.46■□□□□ 0.07
CLIP1-215ENST00000541108 NOX4Q9NPH5 578 aa15.46■□□□□ 0.07
CLIP1-215ENST00000541108 DHDHQ9UQ10 334 aa15.46■□□□□ 0.07
CLIP1-215ENST00000541108 ACACBO00763 2458 aa15.46■□□□□ 0.07
CLIP1-215ENST00000541108 TPRP12270 2363 aaKnown RBP15.45■□□□□ 0.06
CLIP1-215ENST00000541108 PKD1L2Q7Z442 2459 aa15.45■□□□□ 0.06
CLIP1-215ENST00000541108 TRBV5-7A0A0A0MS05 114 aa15.45■□□□□ 0.06
CLIP1-215ENST00000541108 A0A0U1RQV5 110 aa15.45■□□□□ 0.06
CLIP1-215ENST00000541108 LOC107986453A0A1B0GWG9 222 aa15.45■□□□□ 0.06
CLIP1-215ENST00000541108 PIN1P1O15428 100 aa15.45■□□□□ 0.06
CLIP1-215ENST00000541108 RAD51DO75771 328 aa15.45■□□□□ 0.06
CLIP1-215ENST00000541108 LYZL6O75951 148 aa15.45■□□□□ 0.06
CLIP1-215ENST00000541108 DBHP09172 617 aa15.45■□□□□ 0.06
CLIP1-215ENST00000541108 SFRP5Q5T4F7 317 aa15.45■□□□□ 0.06
CLIP1-215ENST00000541108 FAM57BQ71RH2 274 aa15.45■□□□□ 0.06
CLIP1-215ENST00000541108 LUZP2Q86TE4 346 aa15.45■□□□□ 0.06
CLIP1-215ENST00000541108 NAA40Q86UY6 237 aa15.45■□□□□ 0.06
CLIP1-215ENST00000541108 CROCCP3Q8IVE0 287 aa15.45■□□□□ 0.06
CLIP1-215ENST00000541108 TSEN15Q8WW01 171 aaKnown RBP15.45■□□□□ 0.06
CLIP1-215ENST00000541108 PMF1-BGLAPU3KQ54 211 aa15.45■□□□□ 0.06
CLIP1-215ENST00000541108 A0A0G2JNJ9 132 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 IQCMA0A1B0GVH7 501 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 A0A1W2PPK0 400 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 ZNF503-AS2A6NEH8 195 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 IGLV3-1P01715 115 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 SLC2A1P11166 492 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 ZNF12P17014 697 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 CCL1P22362 96 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 CFL1P23528 166 aaKnown RBP15.44■□□□□ 0.06
CLIP1-215ENST00000541108 UBE2NP61088 152 aaKnown RBP15.44■□□□□ 0.06
CLIP1-215ENST00000541108 CCDC54Q8NEL0 328 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 PGAM5Q96HS1 289 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 OBP2BQ9NPH6 170 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 ZNF319Q9P2F9 582 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 Q9UFV3 132 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 A0A075B6Q4 140 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 A0A1B0GTI1 187 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 A0A1B0GVI7 797 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 P2RY10O00398 339 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 SYT7O43581 403 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 STOMP27105 288 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 SOX2P48431 317 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 C1QTNF12Q5T7M4 302 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 MCFD2Q8NI22 146 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 ZNF75AQ96N20 296 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 KCNS3Q9BQ31 491 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 BARHL1Q9BZE3 327 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 SLITRK2Q9H156 845 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 TCF7L1Q9HCS4 588 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 ZNF275Q9NSD4 429 aaPredicted RBP15.44■□□□□ 0.06
CLIP1-215ENST00000541108 ZNF391Q9UJN7 358 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 RTTNQ86VV8 2226 aa15.44■□□□□ 0.06
CLIP1-215ENST00000541108 RP1L1Q8IWN7 2480 aaPredicted RBP15.43■□□□□ 0.06
CLIP1-215ENST00000541108 A8MXE2 369 aa15.43■□□□□ 0.06
CLIP1-215ENST00000541108 SERPINA5P05154 406 aa15.43■□□□□ 0.06
CLIP1-215ENST00000541108 CLEC2LP0C7M8 214 aa15.43■□□□□ 0.06
CLIP1-215ENST00000541108 PAX7P23759 505 aa15.43■□□□□ 0.06
CLIP1-215ENST00000541108 HOXC12P31275 282 aa15.43■□□□□ 0.06
CLIP1-215ENST00000541108 MAGEB1P43366 347 aa15.43■□□□□ 0.06
CLIP1-215ENST00000541108 ZNF474Q6S9Z5 364 aaPredicted RBP15.43■□□□□ 0.06
CLIP1-215ENST00000541108 DOK3Q7L591 496 aa15.43■□□□□ 0.06
CLIP1-215ENST00000541108 MRGPRGQ86SM5 289 aa15.43■□□□□ 0.06
CLIP1-215ENST00000541108 CXorf67Q86X51 503 aaPredicted RBP15.43■□□□□ 0.06
CLIP1-215ENST00000541108 PLPP7Q8NBV4 271 aa15.43■□□□□ 0.06
CLIP1-215ENST00000541108 OR51E1Q8TCB6 317 aa15.43■□□□□ 0.06
CLIP1-215ENST00000541108 AP3S1Q92572 193 aa15.43■□□□□ 0.06
CLIP1-215ENST00000541108 DMRTA2Q96SC8 542 aa15.43■□□□□ 0.06
CLIP1-215ENST00000541108 OR10A2Q9H208 303 aa15.43■□□□□ 0.06
CLIP1-215ENST00000541108 ZCCHC4Q9H5U6 513 aa15.43■□□□□ 0.06
CLIP1-215ENST00000541108 NOX3Q9HBY0 568 aa15.43■□□□□ 0.06
CLIP1-215ENST00000541108 FOXJ3Q9UPW0 622 aa15.43■□□□□ 0.06
CLIP1-215ENST00000541108 LOC100509620A0A075B734 347 aa15.42■□□□□ 0.06
CLIP1-215ENST00000541108 PDCD5O14737 125 aa15.42■□□□□ 0.06
CLIP1-215ENST00000541108 TMEM127O75204 238 aa15.42■□□□□ 0.06
CLIP1-215ENST00000541108 RAB3BP20337 219 aa15.42■□□□□ 0.06
CLIP1-215ENST00000541108 APEX1P27695 318 aaKnown RBP15.42■□□□□ 0.06
CLIP1-215ENST00000541108 CA7P43166 264 aa15.42■□□□□ 0.06
CLIP1-215ENST00000541108 HNRNPA0Q13151 305 aaKnown RBP15.42■□□□□ 0.06
CLIP1-215ENST00000541108 STAC2Q6ZMT1 411 aa15.42■□□□□ 0.06
CLIP1-215ENST00000541108 COLCA1Q6ZS62 124 aa15.42■□□□□ 0.06
CLIP1-215ENST00000541108 Q6ZSR3 168 aa15.42■□□□□ 0.06
CLIP1-215ENST00000541108 ZNF584Q8IVC4 421 aa15.42■□□□□ 0.06
CLIP1-215ENST00000541108 PARP16Q8N5Y8 322 aa15.42■□□□□ 0.06
CLIP1-215ENST00000541108 OR13C3Q8NGS6 347 aa15.42■□□□□ 0.06
CLIP1-215ENST00000541108 TBC1D15Q8TC07 691 aa15.42■□□□□ 0.06
CLIP1-215ENST00000541108 RND1Q92730 232 aa15.42■□□□□ 0.06
CLIP1-215ENST00000541108 POM121L2Q96KW2 1035 aa15.42■□□□□ 0.06
CLIP1-215ENST00000541108 C1QTNF5Q9BXJ0 243 aa15.42■□□□□ 0.06
CLIP1-215ENST00000541108 RGCCQ9H4X1 137 aa15.42■□□□□ 0.06
CLIP1-215ENST00000541108 GPR84Q9NQS5 396 aa15.42■□□□□ 0.06
CLIP1-215ENST00000541108 PLEKHB1Q9UF11 243 aaPredicted RBP15.42■□□□□ 0.06
CLIP1-215ENST00000541108 MEMO1Q9Y316 297 aa15.42■□□□□ 0.06
CLIP1-215ENST00000541108 N6AMT1Q9Y5N5 214 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms