RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 PLEKHA8Q96JA3 519 aa11.13□□□□□ -0.63
LTBR-208ENST00000541005 COPS4Q9BT78 406 aa11.13□□□□□ -0.63
LTBR-208ENST00000541005 EGLN1Q9GZT9 426 aa11.13□□□□□ -0.63
LTBR-208ENST00000541005 OR51V1Q9H2C8 321 aa11.13□□□□□ -0.63
LTBR-208ENST00000541005 MSL2Q9HCI7 577 aa11.13□□□□□ -0.63
LTBR-208ENST00000541005 PTTG3PQ9NZH4 202 aa11.13□□□□□ -0.63
LTBR-208ENST00000541005 OAZ3Q9UMX2 235 aa11.13□□□□□ -0.63
LTBR-208ENST00000541005 INAFM1C9JVW0 142 aa11.12□□□□□ -0.63
LTBR-208ENST00000541005 LCATP04180 440 aa11.12□□□□□ -0.63
LTBR-208ENST00000541005 SELEP16581 610 aa11.12□□□□□ -0.63
LTBR-208ENST00000541005 IGFBP5P24593 272 aa11.12□□□□□ -0.63
LTBR-208ENST00000541005 EPHA2P29317 976 aa11.12□□□□□ -0.63
LTBR-208ENST00000541005 SLC15A1P46059 708 aa11.12□□□□□ -0.63
LTBR-208ENST00000541005 GPR6P46095 362 aaPredicted RBP11.12□□□□□ -0.63
LTBR-208ENST00000541005 EFNB1P98172 346 aa11.12□□□□□ -0.63
LTBR-208ENST00000541005 GK2Q14410 553 aaPredicted RBP11.12□□□□□ -0.63
LTBR-208ENST00000541005 TRIP10Q15642 601 aa11.12□□□□□ -0.63
LTBR-208ENST00000541005 SNAPC1Q16533 368 aa11.12□□□□□ -0.63
LTBR-208ENST00000541005 KRTAP21-3Q3LHN1 58 aa11.12□□□□□ -0.63
LTBR-208ENST00000541005 C12orf73Q69YU5 71 aa11.12□□□□□ -0.63
LTBR-208ENST00000541005 CXXC5Q7LFL8 322 aaKnown RBP11.12□□□□□ -0.63
LTBR-208ENST00000541005 BBS1Q8NFJ9 593 aa11.12□□□□□ -0.63
LTBR-208ENST00000541005 OR8G5Q8NG78 346 aa11.12□□□□□ -0.63
LTBR-208ENST00000541005 OTOSQ8NHW6 89 aa11.12□□□□□ -0.63
LTBR-208ENST00000541005 OTULINQ96BN8 352 aa11.12□□□□□ -0.63
LTBR-208ENST00000541005 ZMYND19Q96E35 227 aaPredicted RBP11.12□□□□□ -0.63
LTBR-208ENST00000541005 KCNJ15Q99712 375 aa11.12□□□□□ -0.63
LTBR-208ENST00000541005 CIB1Q99828 191 aa11.12□□□□□ -0.63
LTBR-208ENST00000541005 ABHD6Q9BV23 337 aa11.12□□□□□ -0.63
LTBR-208ENST00000541005 GABARAPL3Q9BY60 117 aa11.12□□□□□ -0.63
LTBR-208ENST00000541005 TOR3AQ9H497 397 aa11.12□□□□□ -0.63
LTBR-208ENST00000541005 TMEM160Q9NX00 188 aa11.12□□□□□ -0.63
LTBR-208ENST00000541005 ARHGAP32A7KAX9 2087 aa11.12□□□□□ -0.63
LTBR-208ENST00000541005 LRP5LA4QPB2 252 aa11.11□□□□□ -0.63
LTBR-208ENST00000541005 CCDC182A6NF36 153 aa11.11□□□□□ -0.63
LTBR-208ENST00000541005 A8MV72 311 aaPredicted RBP11.11□□□□□ -0.63
LTBR-208ENST00000541005 TPD52L2O43399 206 aaKnown RBP11.11□□□□□ -0.63
LTBR-208ENST00000541005 PRKYO43930 277 aa11.11□□□□□ -0.63
LTBR-208ENST00000541005 SELENOFO60613 162 aa11.11□□□□□ -0.63
LTBR-208ENST00000541005 CDC14BO60729 498 aa11.11□□□□□ -0.63
LTBR-208ENST00000541005 ZNF16P17020 682 aaPredicted RBP11.11□□□□□ -0.63
LTBR-208ENST00000541005 TNFSF4P23510 183 aa11.11□□□□□ -0.63
LTBR-208ENST00000541005 OPRL1P41146 370 aa11.11□□□□□ -0.63
LTBR-208ENST00000541005 SLC6A9P48067 706 aa11.11□□□□□ -0.63
LTBR-208ENST00000541005 TNFAIP6P98066 277 aaPredicted RBP11.11□□□□□ -0.63
LTBR-208ENST00000541005 MALLQ13021 153 aa11.11□□□□□ -0.63
LTBR-208ENST00000541005 EIF2B1Q14232 305 aaKnown RBP11.11□□□□□ -0.63
LTBR-208ENST00000541005 HFEQ30201 348 aa11.11□□□□□ -0.63
LTBR-208ENST00000541005 SNAI3Q3KNW1 292 aa11.11□□□□□ -0.63
LTBR-208ENST00000541005 SPRNQ5BIV9 151 aa11.11□□□□□ -0.63
LTBR-208ENST00000541005 OR2T2Q6IF00 324 aa11.11□□□□□ -0.63
LTBR-208ENST00000541005 NAA40Q86UY6 237 aa11.11□□□□□ -0.63
LTBR-208ENST00000541005 C10orf67Q8IYJ2 551 aa11.11□□□□□ -0.63
LTBR-208ENST00000541005 OR2Z1Q8NG97 314 aa11.11□□□□□ -0.63
LTBR-208ENST00000541005 OR13G1Q8NGZ3 307 aa11.11□□□□□ -0.63
LTBR-208ENST00000541005 RAB3IPQ96QF0 476 aaPredicted RBP11.11□□□□□ -0.63
LTBR-208ENST00000541005 RBM4BQ9BQ04 359 aaKnown RBP11.11□□□□□ -0.63
LTBR-208ENST00000541005 SLC30A2Q9BRI3 323 aa11.11□□□□□ -0.63
LTBR-208ENST00000541005 SEMA6AQ9H2E6 1030 aa11.11□□□□□ -0.63
LTBR-208ENST00000541005 OPA3Q9H6K4 179 aa11.11□□□□□ -0.63
LTBR-208ENST00000541005 TVP23BQ9NYZ1 205 aa11.11□□□□□ -0.63
LTBR-208ENST00000541005 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.11□□□□□ -0.63
LTBR-208ENST00000541005 IL19Q9UHD0 177 aa11.11□□□□□ -0.63
LTBR-208ENST00000541005 CLDN25C9JDP6 229 aa11.1□□□□□ -0.63
LTBR-208ENST00000541005 PPIHO43447 177 aaKnown RBP11.1□□□□□ -0.63
LTBR-208ENST00000541005 APOC1P02654 83 aa11.1□□□□□ -0.63
LTBR-208ENST00000541005 TNFRSF1AP19438 455 aa11.1□□□□□ -0.63
LTBR-208ENST00000541005 ANOS1P23352 680 aa11.1□□□□□ -0.63
LTBR-208ENST00000541005 IL2RGP31785 369 aa11.1□□□□□ -0.63
LTBR-208ENST00000541005 SLC3A1Q07837 685 aa11.1□□□□□ -0.63
LTBR-208ENST00000541005 APOFQ13790 326 aa11.1□□□□□ -0.63
LTBR-208ENST00000541005 TAF13Q15543 124 aa11.1□□□□□ -0.63
LTBR-208ENST00000541005 KLHL12Q53G59 568 aa11.1□□□□□ -0.63
LTBR-208ENST00000541005 LCN1P1Q5VSP4 162 aa11.1□□□□□ -0.63
LTBR-208ENST00000541005 PRSS45Q7RTY3 260 aa11.1□□□□□ -0.63
LTBR-208ENST00000541005 ZNF283Q8N7M2 679 aa11.1□□□□□ -0.63
LTBR-208ENST00000541005 SPSB4Q96A44 273 aa11.1□□□□□ -0.63
LTBR-208ENST00000541005 MSI2Q96DH6 328 aaKnown RBP11.1□□□□□ -0.63
LTBR-208ENST00000541005 ZNF582Q96NG8 517 aaPredicted RBP11.1□□□□□ -0.63
LTBR-208ENST00000541005 AMELYQ99218 206 aa11.1□□□□□ -0.63
LTBR-208ENST00000541005 PKP2Q99959 881 aa11.1□□□□□ -0.63
LTBR-208ENST00000541005 SOX7Q9BT81 388 aa11.1□□□□□ -0.63
LTBR-208ENST00000541005 REPIN1Q9BWE0 567 aaKnown RBP11.1□□□□□ -0.63
LTBR-208ENST00000541005 YAE1D1Q9NRH1 226 aa11.1□□□□□ -0.63
LTBR-208ENST00000541005 CENPMQ9NSP4 180 aa11.1□□□□□ -0.63
LTBR-208ENST00000541005 USE1Q9NZ43 259 aa11.1□□□□□ -0.63
LTBR-208ENST00000541005 CACNG2Q9Y698 323 aa11.1□□□□□ -0.63
LTBR-208ENST00000541005 SAC3D1A6NKF1 404 aa11.09□□□□□ -0.63
LTBR-208ENST00000541005 MLNRO43193 412 aa11.09□□□□□ -0.63
LTBR-208ENST00000541005 XRCC2O43543 280 aa11.09□□□□□ -0.63
LTBR-208ENST00000541005 CRLF1O75462 422 aa11.09□□□□□ -0.63
LTBR-208ENST00000541005 ALPLP05186 524 aa11.09□□□□□ -0.63
LTBR-208ENST00000541005 LYNP07948 512 aa11.09□□□□□ -0.63
LTBR-208ENST00000541005 ALOX5APP20292 161 aa11.09□□□□□ -0.63
LTBR-208ENST00000541005 CX3CR1P49238 355 aa11.09□□□□□ -0.63
LTBR-208ENST00000541005 PRKXP51817 358 aa11.09□□□□□ -0.63
LTBR-208ENST00000541005 CDH15P55291 814 aa11.09□□□□□ -0.63
LTBR-208ENST00000541005 RPS7P62081 194 aaKnown RBP11.09□□□□□ -0.63
LTBR-208ENST00000541005 ZNF92Q03936 586 aa11.09□□□□□ -0.63
LTBR-208ENST00000541005 GLYATL3Q5SZD4 288 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms