RNA–Protein interactions for RNA: ENST00000540987.1

POLE-215, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 3

Gene POLE, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-215	ENST00000540987	SPARC	P09486	303 aa		11.5	□□□□□ -0.57
POLE-215	ENST00000540987	TNFSF4	P23510	183 aa		11.5	□□□□□ -0.57
POLE-215	ENST00000540987	CBX1	P83916	185 aa		11.5	□□□□□ -0.57
POLE-215	ENST00000540987	SLC3A1	Q07837	685 aa		11.5	□□□□□ -0.57
POLE-215	ENST00000540987	BNIP1	Q12981	228 aa		11.5	□□□□□ -0.57
POLE-215	ENST00000540987	GK2	Q14410	553 aa	Predicted RBP	11.5	□□□□□ -0.57
POLE-215	ENST00000540987	SNAI3	Q3KNW1	292 aa		11.5	□□□□□ -0.57
POLE-215	ENST00000540987	DCXR	Q7Z4W1	244 aa		11.5	□□□□□ -0.57
POLE-215	ENST00000540987	PHC2	Q8IXK0	858 aa		11.5	□□□□□ -0.57
POLE-215	ENST00000540987	PAPD5	Q8NDF8	572 aa	Known RBP	11.5	□□□□□ -0.57
POLE-215	ENST00000540987	OR6K6	Q8NGW6	343 aa		11.5	□□□□□ -0.57
POLE-215	ENST00000540987	ST7L	Q8TDW4	575 aa		11.5	□□□□□ -0.57
POLE-215	ENST00000540987	RAB39B	Q96DA2	213 aa		11.5	□□□□□ -0.57
POLE-215	ENST00000540987	MEGF10	Q96KG7	1140 aa		11.5	□□□□□ -0.57
POLE-215	ENST00000540987	GAL3ST1	Q99999	423 aa		11.5	□□□□□ -0.57
POLE-215	ENST00000540987	SLC30A2	Q9BRI3	323 aa		11.5	□□□□□ -0.57
POLE-215	ENST00000540987	IL19	Q9UHD0	177 aa		11.5	□□□□□ -0.57
POLE-215	ENST00000540987	NPTN	Q9Y639	398 aa		11.5	□□□□□ -0.57
POLE-215	ENST00000540987	TRAV20	A0A0B4J274	112 aa		11.49	□□□□□ -0.57
POLE-215	ENST00000540987	IGHV3-64D	A0A0J9YX35	117 aa		11.49	□□□□□ -0.57
POLE-215	ENST00000540987		H3BN98	237 aa		11.49	□□□□□ -0.57
POLE-215	ENST00000540987	ZNF3	P17036	446 aa		11.49	□□□□□ -0.57
POLE-215	ENST00000540987	TNFRSF1A	P19438	455 aa		11.49	□□□□□ -0.57
POLE-215	ENST00000540987	FMO3	P31513	532 aa		11.49	□□□□□ -0.57
POLE-215	ENST00000540987	THBS2	P35442	1172 aa		11.49	□□□□□ -0.57
POLE-215	ENST00000540987	TPTE	P56180	551 aa		11.49	□□□□□ -0.57
POLE-215	ENST00000540987	ZMYND11	Q15326	602 aa		11.49	□□□□□ -0.57
POLE-215	ENST00000540987	KRTAP24-1	Q3LI83	254 aa		11.49	□□□□□ -0.57
POLE-215	ENST00000540987	ACSM5	Q6NUN0	579 aa		11.49	□□□□□ -0.57
POLE-215	ENST00000540987	C1orf229	Q6ZS94	237 aa	Predicted RBP	11.49	□□□□□ -0.57
POLE-215	ENST00000540987	ATG16L2	Q8NAA4	619 aa		11.49	□□□□□ -0.57
POLE-215	ENST00000540987	OR2AE1	Q8NHA4	323 aa		11.49	□□□□□ -0.57
POLE-215	ENST00000540987	SLAMF6	Q96DU3	332 aa		11.49	□□□□□ -0.57
POLE-215	ENST00000540987	ZNF582	Q96NG8	517 aa	Predicted RBP	11.49	□□□□□ -0.57
POLE-215	ENST00000540987	COPS4	Q9BT78	406 aa		11.49	□□□□□ -0.57
POLE-215	ENST00000540987	NTN4	Q9HB63	628 aa		11.49	□□□□□ -0.57
POLE-215	ENST00000540987	UBAP1	Q9NZ09	502 aa		11.49	□□□□□ -0.57
POLE-215	ENST00000540987		F5H5P2	479 aa		11.48	□□□□□ -0.57
POLE-215	ENST00000540987	ZNF593	O00488	134 aa	Predicted RBP	11.48	□□□□□ -0.57
POLE-215	ENST00000540987	GNGT2	O14610	69 aa		11.48	□□□□□ -0.57
POLE-215	ENST00000540987	GSC2	O15499	205 aa		11.48	□□□□□ -0.57
POLE-215	ENST00000540987	E2F6	O75461	281 aa		11.48	□□□□□ -0.57
POLE-215	ENST00000540987	AVP	P01185	164 aa		11.48	□□□□□ -0.57
POLE-215	ENST00000540987	SLC2A1	P11166	492 aa		11.48	□□□□□ -0.57
POLE-215	ENST00000540987	SELE	P16581	610 aa		11.48	□□□□□ -0.57
POLE-215	ENST00000540987	PCMT1	P22061	227 aa		11.48	□□□□□ -0.57
POLE-215	ENST00000540987	PRKACG	P22612	351 aa		11.48	□□□□□ -0.57
POLE-215	ENST00000540987	POU1F1	P28069	291 aa		11.48	□□□□□ -0.57
POLE-215	ENST00000540987	SRP14	P37108	136 aa	Known RBP	11.48	□□□□□ -0.57
POLE-215	ENST00000540987	SLC6A9	P48067	706 aa		11.48	□□□□□ -0.57
POLE-215	ENST00000540987	PRKX	P51817	358 aa		11.48	□□□□□ -0.57
POLE-215	ENST00000540987	TEX30	Q5JUR7	227 aa		11.48	□□□□□ -0.57
POLE-215	ENST00000540987	GLYATL3	Q5SZD4	288 aa		11.48	□□□□□ -0.57
POLE-215	ENST00000540987	SPATC1	Q76KD6	591 aa		11.48	□□□□□ -0.57
POLE-215	ENST00000540987	OR13G1	Q8NGZ3	307 aa		11.48	□□□□□ -0.57
POLE-215	ENST00000540987	ZNF420	Q8TAQ5	688 aa	Predicted RBP	11.48	□□□□□ -0.57
POLE-215	ENST00000540987	SPTSSA	Q969W0	71 aa		11.48	□□□□□ -0.57
POLE-215	ENST00000540987	AMELY	Q99218	206 aa		11.48	□□□□□ -0.57
POLE-215	ENST00000540987	MARCH7	Q9H992	704 aa		11.48	□□□□□ -0.57
POLE-215	ENST00000540987	GCM1	Q9NP62	436 aa		11.48	□□□□□ -0.57
POLE-215	ENST00000540987	DNAJB9	Q9UBS3	223 aa		11.48	□□□□□ -0.57
POLE-215	ENST00000540987	PPP1R3C	Q9UQK1	317 aa		11.48	□□□□□ -0.57
POLE-215	ENST00000540987	ARHGAP32	A7KAX9	2087 aa		11.47	□□□□□ -0.57
POLE-215	ENST00000540987	ZNF878	C9JN71	531 aa		11.47	□□□□□ -0.57
POLE-215	ENST00000540987		F5H0A9	414 aa	Predicted RBP	11.47	□□□□□ -0.57
POLE-215	ENST00000540987	TMEM178B	H3BS89	294 aa		11.47	□□□□□ -0.57
POLE-215	ENST00000540987	SURF4	O15260	269 aa		11.47	□□□□□ -0.57
POLE-215	ENST00000540987	TIPRL	O75663	272 aa		11.47	□□□□□ -0.57
POLE-215	ENST00000540987	PNP	P00491	289 aa		11.47	□□□□□ -0.57
POLE-215	ENST00000540987	HLA-DPB1	P04440	258 aa		11.47	□□□□□ -0.57
POLE-215	ENST00000540987	SBK2	P0C263	348 aa		11.47	□□□□□ -0.57
POLE-215	ENST00000540987	OSM	P13725	252 aa		11.47	□□□□□ -0.57
POLE-215	ENST00000540987	HOXB6	P17509	224 aa	Known RBP	11.47	□□□□□ -0.57
POLE-215	ENST00000540987	ZFP36	P26651	326 aa	Known RBP	11.47	□□□□□ -0.57
POLE-215	ENST00000540987	PMEL	P40967	661 aa		11.47	□□□□□ -0.57
POLE-215	ENST00000540987	SEC61A1	P61619	476 aa	Known RBP	11.47	□□□□□ -0.57
POLE-215	ENST00000540987	BTG1	P62324	171 aa		11.47	□□□□□ -0.57
POLE-215	ENST00000540987	ZNF92	Q03936	586 aa		11.47	□□□□□ -0.57
POLE-215	ENST00000540987	EIF2B1	Q14232	305 aa	Known RBP	11.47	□□□□□ -0.57
POLE-215	ENST00000540987	GINS1	Q14691	196 aa		11.47	□□□□□ -0.57
POLE-215	ENST00000540987	SLC27A4	Q6P1M0	643 aa		11.47	□□□□□ -0.57
POLE-215	ENST00000540987	DRAM2	Q6UX65	266 aa		11.47	□□□□□ -0.57
POLE-215	ENST00000540987	MRPL21	Q7Z2W9	205 aa	Known RBP	11.47	□□□□□ -0.57
POLE-215	ENST00000540987	MOGAT3	Q86VF5	341 aa		11.47	□□□□□ -0.57
POLE-215	ENST00000540987	ERI1	Q8IV48	349 aa	Known RBP	11.47	□□□□□ -0.57
POLE-215	ENST00000540987	TIGD4	Q8IY51	512 aa		11.47	□□□□□ -0.57
POLE-215	ENST00000540987	OR6N2	Q8NGY6	317 aa		11.47	□□□□□ -0.57
POLE-215	ENST00000540987	UTP4	Q969X6	686 aa	Known RBP	11.47	□□□□□ -0.57
POLE-215	ENST00000540987	INTS14	Q96SY0	518 aa		11.47	□□□□□ -0.57
POLE-215	ENST00000540987	TMPRSS13	Q9BYE2	586 aa		11.47	□□□□□ -0.57
POLE-215	ENST00000540987	CENPM	Q9NSP4	180 aa		11.47	□□□□□ -0.57
POLE-215	ENST00000540987	LOC105371242	A0A075B767	164 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	CD300LB	A8K4G0	201 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	SELENOF	O60613	162 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	GLCE	O94923	617 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	CYB5R3	P00387	301 aa	Predicted RBP	11.46	□□□□□ -0.57
POLE-215	ENST00000540987	ANXA8	P13928	327 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	GSTT1	P30711	240 aa		11.46	□□□□□ -0.57
POLE-215	ENST00000540987	SRP9	P49458	86 aa	Known RBP	11.46	□□□□□ -0.57
POLE-215	ENST00000540987	RAD23A	P54725	363 aa		11.46	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms