RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 UBL4BQ8N7F7 174 aa3.54□□□□□ -1.84
YBX3-210ENST00000540975 NECAB1Q8N987 351 aa3.54□□□□□ -1.84
YBX3-210ENST00000540975 TMEM104Q8NE00 496 aa3.54□□□□□ -1.84
YBX3-210ENST00000540975 OR9K2Q8NGE7 335 aa3.54□□□□□ -1.84
YBX3-210ENST00000540975 RNASE11Q8TAA1 199 aaKnown RBP3.54□□□□□ -1.84
YBX3-210ENST00000540975 PNPT1Q8TCS8 783 aaKnown RBP3.54□□□□□ -1.84
YBX3-210ENST00000540975 RAET1EQ8TD07 263 aa3.54□□□□□ -1.84
YBX3-210ENST00000540975 GLYATL2Q8WU03 294 aa3.54□□□□□ -1.84
YBX3-210ENST00000540975 DNAJC9Q8WXX5 260 aa3.54□□□□□ -1.84
YBX3-210ENST00000540975 ELMO1Q92556 727 aa3.54□□□□□ -1.84
YBX3-210ENST00000540975 BORCS5Q969J3 196 aa3.54□□□□□ -1.84
YBX3-210ENST00000540975 YIPF5Q969M3 257 aa3.54□□□□□ -1.84
YBX3-210ENST00000540975 CPNE4Q96A23 557 aaPredicted RBP3.54□□□□□ -1.84
YBX3-210ENST00000540975 MCUR1Q96AQ8 359 aa3.54□□□□□ -1.84
YBX3-210ENST00000540975 TAMM41Q96BW9 452 aa3.54□□□□□ -1.84
YBX3-210ENST00000540975 PACRGQ96M98 296 aaPredicted RBP3.54□□□□□ -1.84
YBX3-210ENST00000540975 RNF145Q96MT1 663 aa3.54□□□□□ -1.84
YBX3-210ENST00000540975 C12orf57Q99622 126 aa3.54□□□□□ -1.84
YBX3-210ENST00000540975 NRIP2Q9BQI9 281 aa3.54□□□□□ -1.84
YBX3-210ENST00000540975 FICDQ9BVA6 458 aa3.54□□□□□ -1.84
YBX3-210ENST00000540975 MRPL13Q9BYD1 178 aaKnown RBP3.54□□□□□ -1.84
YBX3-210ENST00000540975 ANKRD60Q9BZ19 345 aa3.54□□□□□ -1.84
YBX3-210ENST00000540975 GOLPH3Q9H4A6 298 aa3.54□□□□□ -1.84
YBX3-210ENST00000540975 TMBIM4Q9HC24 238 aa3.54□□□□□ -1.84
YBX3-210ENST00000540975 MYOZ1Q9NP98 299 aaPredicted RBP3.54□□□□□ -1.84
YBX3-210ENST00000540975 XPNPEP1Q9NQW7 623 aa3.54□□□□□ -1.84
YBX3-210ENST00000540975 ZC4H2Q9NQZ6 224 aa3.54□□□□□ -1.84
YBX3-210ENST00000540975 B9D1Q9UPM9 204 aa3.54□□□□□ -1.84
YBX3-210ENST00000540975 PSG11Q9UQ72 335 aa3.54□□□□□ -1.84
YBX3-210ENST00000540975 ERVW-1Q9UQF0 538 aa3.54□□□□□ -1.84
YBX3-210ENST00000540975 POFUT2Q9Y2G5 429 aa3.54□□□□□ -1.84
YBX3-210ENST00000540975 RBMX2Q9Y388 322 aaKnown RBP3.54□□□□□ -1.84
YBX3-210ENST00000540975 PRELID3BQ9Y3B1 194 aa3.54□□□□□ -1.84
YBX3-210ENST00000540975 PPLO60437 1756 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 CLTCQ00610 1675 aaKnown RBP3.53□□□□□ -1.84
YBX3-210ENST00000540975 CLUHO75153 1309 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 IGHV2-70DA0A0C4DH43 119 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 A0A1B0GUH1 482 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 SMIM31A0A1B0GVY4 71 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 OR2AT4A6NND4 320 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 PRAMEF26H0Y7S4 382 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 TMX2-CTNND1H3BSU7 103 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 TXNDC9O14530 226 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 RNF13O43567 381 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 ZNF324O75467 553 aaPredicted RBP3.53□□□□□ -1.84
YBX3-210ENST00000540975 UGT2B4P06133 528 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 GIMD1P0DJR0 217 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 DTYMKP23919 212 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 PCK1P35558 622 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 TGFBR2P37173 567 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 CDK9P50750 372 aaKnown RBP3.53□□□□□ -1.84
YBX3-210ENST00000540975 RGS8P57771 180 aaPredicted RBP3.53□□□□□ -1.84
YBX3-210ENST00000540975 PSME3P61289 254 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 YWHAGP61981 247 aaKnown RBP eCLIP3.53□□□□□ -1.84
YBX3-210ENST00000540975 CDK16Q00536 496 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 MYL5Q02045 173 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 C5orf64Q2M2E5 130 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 ALKBH6Q3KRA9 238 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 PRAMEF5Q5TYX0 476 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 GPR157Q5UAW9 335 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 PRAMEF6Q5VXH4 476 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 RESP18Q5W5W9 173 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 NCR3LG1Q68D85 454 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 LRRC74BQ6ZQY2 392 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 HORMAD1Q86X24 394 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 RALGPS2Q86X27 583 aaPredicted RBP3.53□□□□□ -1.84
YBX3-210ENST00000540975 ECHDC2Q86YB7 292 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 PNKDQ8N490 385 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 FADS6Q8N9I5 356 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 CYB561A3Q8NBI2 242 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 OR4A15Q8NGL6 344 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 OR2L8Q8NGY9 312 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 GPX8Q8TED1 209 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 RNF185Q96GF1 192 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 MBOAT7Q96N66 472 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 PPP1R2P1Q96PQ5 205 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 SLC6A7Q99884 636 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 HINT2Q9BX68 163 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 ZNF717Q9BY31 904 aaPredicted RBP3.53□□□□□ -1.84
YBX3-210ENST00000540975 ASB7Q9H672 318 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 SLC25A22Q9H936 323 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 AHSPQ9NZD4 102 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 GCNT4Q9P109 453 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 MYEF2Q9P2K5 600 aaKnown RBP3.53□□□□□ -1.84
YBX3-210ENST00000540975 KIF25Q9UIL4 384 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 TBC1D24Q9ULP9 559 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 MYO10Q9HD67 2058 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 KIDINS220Q9ULH0 1771 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 PTPRMP28827 1452 aa3.53□□□□□ -1.84
YBX3-210ENST00000540975 ANKRD26Q9UPS8 1709 aa3.53□□□□□ -1.85
YBX3-210ENST00000540975 TECPR2O15040 1411 aa3.53□□□□□ -1.85
YBX3-210ENST00000540975 KIF20BQ96Q89 1820 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.52□□□□□ -1.85
YBX3-210ENST00000540975 IGKV2-28A0A075B6P5 120 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 MGAT4DA6NG13 374 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 KRTAP4-16G5E9R7 235 aaPredicted RBP3.52□□□□□ -1.85
YBX3-210ENST00000540975 TCAPO15273 167 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 GMDSO60547 372 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 CST8O60676 142 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 EIF1BO60739 113 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms