RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 OCM2P0CE71 109 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 OR8G3PP0DMU2 310 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 CALCBP10092 127 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 SRMP19623 302 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 MSR1P21757 451 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 ACHEP22303 614 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 INPP1P49441 399 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 P2RY4P51582 365 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 CLDN17P56750 224 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 B3GALT5-AS1P59052 145 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 LCN6P62502 163 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 MRPS10P82664 201 aaKnown RBP7.34□□□□□ -1.23
CHD4-208ENST00000540960 FOXO1Q12778 655 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 RIN1Q13671 783 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 DOC2BQ14184 412 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 MELKQ14680 651 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 SFXN4Q6P4A7 337 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 SLC25A47Q6Q0C1 308 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 FAM131AQ6UXB0 335 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 NHLRC1Q6VVB1 395 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 SYT9Q86SS6 491 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 CDH26Q8IXH8 852 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 GPR137CQ8N3F9 429 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 FAM109AQ8N4B1 249 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 PARP16Q8N5Y8 322 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 ZFP62Q8NB50 900 aaPredicted RBP7.34□□□□□ -1.23
CHD4-208ENST00000540960 C19orf18Q8NEA5 215 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 SGMS2Q8NHU3 365 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 ZNF671Q8TAW3 534 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 ZPLD1Q8TCW7 415 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 RNF133Q8WVZ7 376 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 RAB40AQ8WXH6 277 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 TMEM54Q969K7 222 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 TMEM45BQ96B21 275 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 C4orf45Q96LM5 186 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 TSSK2Q96PF2 358 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 NELFAQ9H3P2 528 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 TMEM185BQ9H7F4 350 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 GLRX2Q9NS18 164 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 CYB5R1Q9UHQ9 305 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 ZNF391Q9UJN7 358 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 COPS3Q9UNS2 423 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 FOXJ3Q9UPW0 622 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 DHDHQ9UQ10 334 aa7.34□□□□□ -1.23
CHD4-208ENST00000540960 IGKV3D-15A0A087WSY6 115 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 A0A0J9YW62 118 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 A0A1W2PPL8 197 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 ANXA2P2A6NMY6 339 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 ZNF724A8MTY0 619 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 FAM25AB3EWG3 89 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 FAM25CB3EWG5 89 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 FAM25GB3EWG6 89 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 E9PI62 339 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 DCTN6O00399 190 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 DHHO43323 396 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 CYTIPO60759 359 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 SCGNO76038 276 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 GLSO94925 669 aaPredicted RBP7.33□□□□□ -1.24
CHD4-208ENST00000540960 RPP14O95059 124 aaKnown RBP7.33□□□□□ -1.24
CHD4-208ENST00000540960 ZFPL1O95159 310 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 FARS2O95363 451 aaKnown RBP7.33□□□□□ -1.24
CHD4-208ENST00000540960 ABHD16AO95870 558 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 ANXA2P07355 339 aaKnown RBP7.33□□□□□ -1.24
CHD4-208ENST00000540960 OCMP0CE72 109 aaPredicted RBP7.33□□□□□ -1.24
CHD4-208ENST00000540960 GLI4P10075 376 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 IL11P20809 199 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 CTSSP25774 331 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 HSD11B1P28845 292 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 CD79BP40259 229 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 RFC3P40938 356 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 EVX1P49640 407 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 GFRA1P56159 465 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 PPIAP62937 165 aaKnown RBP7.33□□□□□ -1.24
CHD4-208ENST00000540960 MRPS34P82930 218 aaKnown RBP7.33□□□□□ -1.24
CHD4-208ENST00000540960 SCRN3Q0VDG4 424 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 MIDNQ504T8 468 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 IDNKQ5T6J7 187 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 BCL2L15Q5TBC7 163 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 ZNF468Q5VIY5 522 aaPredicted RBP7.33□□□□□ -1.24
CHD4-208ENST00000540960 GLT8D1Q68CQ7 371 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 RTL6Q6ICC9 239 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 MZT2BQ6NZ67 158 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 FOXL2NBQ6ZUU3 175 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 SSX6Q7RTT6 188 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 AAED1Q7RTV5 226 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 DCXRQ7Z4W1 244 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 LUZP2Q86TE4 346 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 YRDCQ86U90 279 aaKnown RBP7.33□□□□□ -1.24
CHD4-208ENST00000540960 ZNF227Q86WZ6 799 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 SULF2Q8IWU5 870 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 C20orf196Q8IYI0 205 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 OR8H2Q8N162 312 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 NKAIN3Q8N8D7 197 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 TSEN15Q8WW01 171 aaKnown RBP7.33□□□□□ -1.24
CHD4-208ENST00000540960 DEDD2Q8WXF8 326 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 C11orf40Q8WZ69 217 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 PIGTQ969N2 578 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 MCHR2Q969V1 340 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 SPTSSAQ969W0 71 aa7.33□□□□□ -1.24
CHD4-208ENST00000540960 C10orf35Q96D05 121 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms