RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 INTS14Q96SY0 518 aa12.77□□□□□ -0.37
UBE3B-212ENST00000540230 SEMA6AQ9H2E6 1030 aa12.77□□□□□ -0.37
UBE3B-212ENST00000540230 MARCH7Q9H992 704 aa12.77□□□□□ -0.37
UBE3B-212ENST00000540230 CENPMQ9NSP4 180 aa12.77□□□□□ -0.37
UBE3B-212ENST00000540230 ZDHHC8Q9ULC8 765 aa12.77□□□□□ -0.37
UBE3B-212ENST00000540230 DYSFO75923 2080 aa12.76□□□□□ -0.37
UBE3B-212ENST00000540230 LOC100289279A0A1B0GTE1 492 aa12.76□□□□□ -0.37
UBE3B-212ENST00000540230 G3V2T6 193 aa12.76□□□□□ -0.37
UBE3B-212ENST00000540230 H0YL77 283 aa12.76□□□□□ -0.37
UBE3B-212ENST00000540230 SELENOFO60613 162 aa12.76□□□□□ -0.37
UBE3B-212ENST00000540230 SLC2A1P11166 492 aa12.76□□□□□ -0.37
UBE3B-212ENST00000540230 SLC2A5P22732 501 aa12.76□□□□□ -0.37
UBE3B-212ENST00000540230 TPTEP56180 551 aa12.76□□□□□ -0.37
UBE3B-212ENST00000540230 EIF2B1Q14232 305 aaKnown RBP12.76□□□□□ -0.37
UBE3B-212ENST00000540230 PTGES3Q15185 160 aaKnown RBP12.76□□□□□ -0.37
UBE3B-212ENST00000540230 KLHL12Q53G59 568 aa12.76□□□□□ -0.37
UBE3B-212ENST00000540230 ZMAT1Q5H9K5 638 aa12.76□□□□□ -0.37
UBE3B-212ENST00000540230 HIPK1Q86Z02 1210 aa12.76□□□□□ -0.37
UBE3B-212ENST00000540230 PARP8Q8N3A8 854 aa12.76□□□□□ -0.37
UBE3B-212ENST00000540230 OR10AD1Q8NGE0 317 aa12.76□□□□□ -0.37
UBE3B-212ENST00000540230 OR2AE1Q8NHA4 323 aa12.76□□□□□ -0.37
UBE3B-212ENST00000540230 PYDC1Q8WXC3 89 aa12.76□□□□□ -0.37
UBE3B-212ENST00000540230 DNAJC9Q8WXX5 260 aa12.76□□□□□ -0.37
UBE3B-212ENST00000540230 CCL17Q92583 94 aa12.76□□□□□ -0.37
UBE3B-212ENST00000540230 COPS4Q9BT78 406 aa12.76□□□□□ -0.37
UBE3B-212ENST00000540230 TVP23BQ9NYZ1 205 aa12.76□□□□□ -0.37
UBE3B-212ENST00000540230 WIPI2Q9Y4P8 454 aa12.76□□□□□ -0.37
UBE3B-212ENST00000540230 IQCF6A8MYZ5 107 aa12.75□□□□□ -0.37
UBE3B-212ENST00000540230 FAM157AC9JC47 383 aa12.75□□□□□ -0.37
UBE3B-212ENST00000540230 ZNF878C9JN71 531 aa12.75□□□□□ -0.37
UBE3B-212ENST00000540230 MLNRO43193 412 aa12.75□□□□□ -0.37
UBE3B-212ENST00000540230 LMX1BO60663 402 aa12.75□□□□□ -0.37
UBE3B-212ENST00000540230 TGFAP01135 160 aa12.75□□□□□ -0.37
UBE3B-212ENST00000540230 HMGN1P05114 100 aa12.75□□□□□ -0.37
UBE3B-212ENST00000540230 PAICSP22234 425 aaKnown RBP12.75□□□□□ -0.37
UBE3B-212ENST00000540230 SLC6A9P48067 706 aa12.75□□□□□ -0.37
UBE3B-212ENST00000540230 BLVRAP53004 296 aa12.75□□□□□ -0.37
UBE3B-212ENST00000540230 KPNB1Q14974 876 aaKnown RBP12.75□□□□□ -0.37
UBE3B-212ENST00000540230 KDM4DQ6B0I6 523 aa12.75□□□□□ -0.37
UBE3B-212ENST00000540230 OR8G5Q8NG78 346 aa12.75□□□□□ -0.37
UBE3B-212ENST00000540230 ITLN1Q8WWA0 313 aa12.75□□□□□ -0.37
UBE3B-212ENST00000540230 SPTSSAQ969W0 71 aa12.75□□□□□ -0.37
UBE3B-212ENST00000540230 DIRC2Q96SL1 478 aa12.75□□□□□ -0.37
UBE3B-212ENST00000540230 KCNJ15Q99712 375 aa12.75□□□□□ -0.37
UBE3B-212ENST00000540230 ABHD6Q9BV23 337 aa12.75□□□□□ -0.37
UBE3B-212ENST00000540230 GABARAPL1Q9H0R8 117 aa12.75□□□□□ -0.37
UBE3B-212ENST00000540230 KRT84Q9NSB2 600 aa12.75□□□□□ -0.37
UBE3B-212ENST00000540230 TMEFF2Q9UIK5 374 aaPredicted RBP12.75□□□□□ -0.37
UBE3B-212ENST00000540230 CLDN25C9JDP6 229 aa12.74□□□□□ -0.37
UBE3B-212ENST00000540230 PRKYO43930 277 aa12.74□□□□□ -0.37
UBE3B-212ENST00000540230 NAA10P41227 235 aaPredicted RBP12.74□□□□□ -0.37
UBE3B-212ENST00000540230 CDH15P55291 814 aa12.74□□□□□ -0.37
UBE3B-212ENST00000540230 ACTR3P61158 418 aa12.74□□□□□ -0.37
UBE3B-212ENST00000540230 LMO4P61968 165 aa12.74□□□□□ -0.37
UBE3B-212ENST00000540230 ZNF92Q03936 586 aa12.74□□□□□ -0.37
UBE3B-212ENST00000540230 SNAPC1Q16533 368 aa12.74□□□□□ -0.37
UBE3B-212ENST00000540230 HFEQ30201 348 aa12.74□□□□□ -0.37
UBE3B-212ENST00000540230 KRTAP21-3Q3LHN1 58 aa12.74□□□□□ -0.37
UBE3B-212ENST00000540230 GLYATL3Q5SZD4 288 aa12.74□□□□□ -0.37
UBE3B-212ENST00000540230 FAM166AQ6J272 317 aa12.74□□□□□ -0.37
UBE3B-212ENST00000540230 IL17RELQ6ZVW7 336 aa12.74□□□□□ -0.37
UBE3B-212ENST00000540230 CXXC5Q7LFL8 322 aaKnown RBP12.74□□□□□ -0.37
UBE3B-212ENST00000540230 BCDIN3DQ7Z5W3 292 aaKnown RBP12.74□□□□□ -0.37
UBE3B-212ENST00000540230 ZDHHC13Q8IUH4 622 aa12.74□□□□□ -0.37
UBE3B-212ENST00000540230 HPS1Q92902 700 aa12.74□□□□□ -0.37
UBE3B-212ENST00000540230 C1orf159Q96HA4 380 aa12.74□□□□□ -0.37
UBE3B-212ENST00000540230 OR2V2Q96R30 315 aa12.74□□□□□ -0.37
UBE3B-212ENST00000540230 SLC30A2Q9BRI3 323 aa12.74□□□□□ -0.37
UBE3B-212ENST00000540230 EGLN1Q9GZT9 426 aa12.74□□□□□ -0.37
UBE3B-212ENST00000540230 OAZ3Q9UMX2 235 aa12.74□□□□□ -0.37
UBE3B-212ENST00000540230 KLHDC2Q9Y2U9 406 aa12.74□□□□□ -0.37
UBE3B-212ENST00000540230 IGHV3-64DA0A0J9YX35 117 aa12.73□□□□□ -0.37
UBE3B-212ENST00000540230 CCDC182A6NF36 153 aa12.73□□□□□ -0.37
UBE3B-212ENST00000540230 H3BNX3 289 aa12.73□□□□□ -0.37
UBE3B-212ENST00000540230 PRODHO43272 600 aa12.73□□□□□ -0.37
UBE3B-212ENST00000540230 HLA-DPB1P04440 258 aa12.73□□□□□ -0.37
UBE3B-212ENST00000540230 FCGR1AP12314 374 aa12.73□□□□□ -0.37
UBE3B-212ENST00000540230 POLR2IP36954 125 aaKnown RBP12.73□□□□□ -0.37
UBE3B-212ENST00000540230 ESRRGP62508 458 aa12.73□□□□□ -0.37
UBE3B-212ENST00000540230 APOFQ13790 326 aa12.73□□□□□ -0.37
UBE3B-212ENST00000540230 DRAM2Q6UX65 266 aa12.73□□□□□ -0.37
UBE3B-212ENST00000540230 ZNF771Q7L3S4 317 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-212ENST00000540230 ZNF283Q8N7M2 679 aa12.73□□□□□ -0.37
UBE3B-212ENST00000540230 RNF133Q8WVZ7 376 aa12.73□□□□□ -0.37
UBE3B-212ENST00000540230 PLEKHA8Q96JA3 519 aa12.73□□□□□ -0.37
UBE3B-212ENST00000540230 ZNF582Q96NG8 517 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-212ENST00000540230 CIB1Q99828 191 aa12.73□□□□□ -0.37
UBE3B-212ENST00000540230 PKP2Q99959 881 aa12.73□□□□□ -0.37
UBE3B-212ENST00000540230 LPAR2Q9HBW0 351 aa12.73□□□□□ -0.37
UBE3B-212ENST00000540230 IL19Q9UHD0 177 aa12.73□□□□□ -0.37
UBE3B-212ENST00000540230 KCNS2Q9ULS6 477 aa12.73□□□□□ -0.37
UBE3B-212ENST00000540230 N6AMT1Q9Y5N5 214 aa12.73□□□□□ -0.37
UBE3B-212ENST00000540230 SAC3D1A6NKF1 404 aa12.72□□□□□ -0.37
UBE3B-212ENST00000540230 ZAR1LA6NP61 321 aa12.72□□□□□ -0.37
UBE3B-212ENST00000540230 KIAA1324LA8MWY0 1029 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-212ENST00000540230 SELEP16581 610 aa12.72□□□□□ -0.37
UBE3B-212ENST00000540230 CX3CR1P49238 355 aa12.72□□□□□ -0.37
UBE3B-212ENST00000540230 HCCSP53701 268 aa12.72□□□□□ -0.37
UBE3B-212ENST00000540230 RPS7P62081 194 aaKnown RBP12.72□□□□□ -0.37
UBE3B-212ENST00000540230 TAF13Q15543 124 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms