RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 IFNW1P05000 195 aa16.51■□□□□ 0.23
LPCAT3-210ENST00000540090 HOXA4Q00056 320 aaPredicted RBP16.51■□□□□ 0.23
LPCAT3-210ENST00000540090 GK2Q14410 553 aaPredicted RBP16.51■□□□□ 0.23
LPCAT3-210ENST00000540090 FBLN7Q53RD9 439 aa16.51■□□□□ 0.23
LPCAT3-210ENST00000540090 METTL11BQ5VVY1 283 aa16.51■□□□□ 0.23
LPCAT3-210ENST00000540090 VTCN1Q7Z7D3 282 aa16.51■□□□□ 0.23
LPCAT3-210ENST00000540090 PNLDC1Q8NA58 520 aaKnown RBP16.51■□□□□ 0.23
LPCAT3-210ENST00000540090 NDEL1Q9GZM8 345 aa16.51■□□□□ 0.23
LPCAT3-210ENST00000540090 SIRPDQ9H106 197 aa16.51■□□□□ 0.23
LPCAT3-210ENST00000540090 UFSP2Q9NUQ7 469 aa16.51■□□□□ 0.23
LPCAT3-210ENST00000540090 RNF7Q9UBF6 113 aa16.51■□□□□ 0.23
LPCAT3-210ENST00000540090 POLR1DQ9Y2S0 133 aa16.51■□□□□ 0.23
LPCAT3-210ENST00000540090 LGALS8O00214 317 aa16.5■□□□□ 0.23
LPCAT3-210ENST00000540090 NDUFB2O95178 105 aa16.5■□□□□ 0.23
LPCAT3-210ENST00000540090 PRSS12P56730 875 aa16.5■□□□□ 0.23
LPCAT3-210ENST00000540090 PRAMEF6Q5VXH4 476 aa16.5■□□□□ 0.23
LPCAT3-210ENST00000540090 SFRP4Q6FHJ7 346 aaPredicted RBP16.5■□□□□ 0.23
LPCAT3-210ENST00000540090 PGM2L1Q6PCE3 622 aa16.5■□□□□ 0.23
LPCAT3-210ENST00000540090 OR2T12Q8NG77 320 aa16.5■□□□□ 0.23
LPCAT3-210ENST00000540090 LHX4Q969G2 390 aa16.5■□□□□ 0.23
LPCAT3-210ENST00000540090 GPX7Q96SL4 187 aaPredicted RBP16.5■□□□□ 0.23
LPCAT3-210ENST00000540090 MMADHCQ9H3L0 296 aaPredicted RBP16.5■□□□□ 0.23
LPCAT3-210ENST00000540090 C16orf95Q9H693 158 aa16.5■□□□□ 0.23
LPCAT3-210ENST00000540090 SIGLEC7Q9Y286 467 aa16.5■□□□□ 0.23
LPCAT3-210ENST00000540090 A0A0G2JND7 137 aa16.49■□□□□ 0.23
LPCAT3-210ENST00000540090 A0A0U1RQK1 487 aa16.49■□□□□ 0.23
LPCAT3-210ENST00000540090 ELOVL7A1L3X0 281 aa16.49■□□□□ 0.23
LPCAT3-210ENST00000540090 MRASO14807 208 aa16.49■□□□□ 0.23
LPCAT3-210ENST00000540090 NDUFA2O43678 99 aa16.49■□□□□ 0.23
LPCAT3-210ENST00000540090 PTBP3O95758 552 aaKnown RBP16.49■□□□□ 0.23
LPCAT3-210ENST00000540090 CDKN2AP42771 156 aaKnown RBP16.49■□□□□ 0.23
LPCAT3-210ENST00000540090 COX10Q12887 443 aa16.49■□□□□ 0.23
LPCAT3-210ENST00000540090 MEP1BQ16820 701 aa16.49■□□□□ 0.23
LPCAT3-210ENST00000540090 CORO6Q6QEF8 472 aa16.49■□□□□ 0.23
LPCAT3-210ENST00000540090 GDPGP1Q6ZNW5 385 aa16.49■□□□□ 0.23
LPCAT3-210ENST00000540090 Q6ZSV7 163 aa16.49■□□□□ 0.23
LPCAT3-210ENST00000540090 PTCHD4Q6ZW05 846 aa16.49■□□□□ 0.23
LPCAT3-210ENST00000540090 RRM2BQ7LG56 351 aa16.49■□□□□ 0.23
LPCAT3-210ENST00000540090 ADCK1Q86TW2 530 aa16.49■□□□□ 0.23
LPCAT3-210ENST00000540090 FAM110DQ8TAY7 271 aaPredicted RBP16.49■□□□□ 0.23
LPCAT3-210ENST00000540090 ATP6V1G3Q96LB4 118 aa16.49■□□□□ 0.23
LPCAT3-210ENST00000540090 SIKE1Q9BRV8 207 aa16.49■□□□□ 0.23
LPCAT3-210ENST00000540090 FN3KRPQ9HA64 309 aa16.49■□□□□ 0.23
LPCAT3-210ENST00000540090 SMURF1Q9HCE7 757 aa16.49■□□□□ 0.23
LPCAT3-210ENST00000540090 INTS9Q9NV88 658 aaKnown RBP16.49■□□□□ 0.23
LPCAT3-210ENST00000540090 RPS6KA6Q9UK32 745 aa16.49■□□□□ 0.23
LPCAT3-210ENST00000540090 IER3IP1Q9Y5U9 82 aa16.49■□□□□ 0.23
LPCAT3-210ENST00000540090 SOCS2O14508 198 aa16.48■□□□□ 0.23
LPCAT3-210ENST00000540090 ADAM20O43506 726 aa16.48■□□□□ 0.23
LPCAT3-210ENST00000540090 ACSM4P0C7M7 580 aa16.48■□□□□ 0.23
LPCAT3-210ENST00000540090 ARF6P62330 175 aa16.48■□□□□ 0.23
LPCAT3-210ENST00000540090 C11orf91Q3C1V1 193 aa16.48■□□□□ 0.23
LPCAT3-210ENST00000540090 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.48■□□□□ 0.23
LPCAT3-210ENST00000540090 PLPP7Q8NBV4 271 aa16.48■□□□□ 0.23
LPCAT3-210ENST00000540090 SLCO4A1Q96BD0 722 aa16.48■□□□□ 0.23
LPCAT3-210ENST00000540090 TSSK2Q96PF2 358 aa16.48■□□□□ 0.23
LPCAT3-210ENST00000540090 SLC22A4Q9H015 551 aa16.48■□□□□ 0.23
LPCAT3-210ENST00000540090 RASSF4Q9H2L5 321 aa16.48■□□□□ 0.23
LPCAT3-210ENST00000540090 DPAGT1Q9H3H5 408 aa16.48■□□□□ 0.23
LPCAT3-210ENST00000540090 ANKRD19PQ9H560 264 aa16.48■□□□□ 0.23
LPCAT3-210ENST00000540090 TMEM5Q9Y2B1 443 aa16.48■□□□□ 0.23
LPCAT3-210ENST00000540090 TRAV38-1A0A0B4J264 116 aa16.47■□□□□ 0.23
LPCAT3-210ENST00000540090 C5orf63A6NC05 138 aa16.47■□□□□ 0.23
LPCAT3-210ENST00000540090 BBIP1A8MTZ0 92 aa16.47■□□□□ 0.23
LPCAT3-210ENST00000540090 C3orf80F5H4A9 247 aa16.47■□□□□ 0.23
LPCAT3-210ENST00000540090 F5H5K5 113 aa16.47■□□□□ 0.23
LPCAT3-210ENST00000540090 DCTN6O00399 190 aa16.47■□□□□ 0.23
LPCAT3-210ENST00000540090 PPP1R3DO95685 299 aa16.47■□□□□ 0.23
LPCAT3-210ENST00000540090 TXNDC12O95881 172 aa16.47■□□□□ 0.23
LPCAT3-210ENST00000540090 CRABP1P29762 137 aa16.47■□□□□ 0.23
LPCAT3-210ENST00000540090 CENPAP49450 140 aa16.47■□□□□ 0.23
LPCAT3-210ENST00000540090 MALLQ13021 153 aa16.47■□□□□ 0.23
LPCAT3-210ENST00000540090 C2orf68Q2NKX9 166 aa16.47■□□□□ 0.23
LPCAT3-210ENST00000540090 HIST2H2BDQ6DRA6 164 aa16.47■□□□□ 0.23
LPCAT3-210ENST00000540090 PGAP1Q75T13 922 aa16.47■□□□□ 0.23
LPCAT3-210ENST00000540090 NAA40Q86UY6 237 aa16.47■□□□□ 0.23
LPCAT3-210ENST00000540090 PIP4P2Q8N4L2 257 aa16.47■□□□□ 0.23
LPCAT3-210ENST00000540090 SCCPDHQ8NBX0 429 aa16.47■□□□□ 0.23
LPCAT3-210ENST00000540090 SLC7A13Q8TCU3 470 aa16.47■□□□□ 0.23
LPCAT3-210ENST00000540090 SPRYD4Q8WW59 207 aaPredicted RBP16.47■□□□□ 0.23
LPCAT3-210ENST00000540090 LRTOMTQ8WZ04 291 aa16.47■□□□□ 0.23
LPCAT3-210ENST00000540090 FAM46AQ96IP4 442 aaKnown RBP16.47■□□□□ 0.23
LPCAT3-210ENST00000540090 TRIM36Q9NQ86 728 aa16.47■□□□□ 0.23
LPCAT3-210ENST00000540090 GID8Q9NWU2 228 aa16.47■□□□□ 0.23
LPCAT3-210ENST00000540090 NOP16Q9Y3C1 178 aaKnown RBP16.47■□□□□ 0.23
LPCAT3-210ENST00000540090 IGLV1-36A0A0B4J1U3 117 aa16.46■□□□□ 0.23
LPCAT3-210ENST00000540090 OOEPA6NGQ2 149 aa16.46■□□□□ 0.23
LPCAT3-210ENST00000540090 EDF1O60869 148 aaKnown RBP16.46■□□□□ 0.23
LPCAT3-210ENST00000540090 FCN3O75636 299 aa16.46■□□□□ 0.23
LPCAT3-210ENST00000540090 TSPAN9O75954 239 aa16.46■□□□□ 0.23
LPCAT3-210ENST00000540090 ECDO95905 644 aaPredicted RBP16.46■□□□□ 0.23
LPCAT3-210ENST00000540090 LCATP04180 440 aa16.46■□□□□ 0.23
LPCAT3-210ENST00000540090 CA6P23280 308 aa16.46■□□□□ 0.23
LPCAT3-210ENST00000540090 MDH1P40925 334 aaKnown RBP16.46■□□□□ 0.23
LPCAT3-210ENST00000540090 ECH1Q13011 328 aa16.46■□□□□ 0.23
LPCAT3-210ENST00000540090 OR8G1Q15617 311 aa16.46■□□□□ 0.23
LPCAT3-210ENST00000540090 OR8B8Q15620 311 aa16.46■□□□□ 0.23
LPCAT3-210ENST00000540090 IFI44LQ53G44 452 aa16.46■□□□□ 0.23
LPCAT3-210ENST00000540090 DNM1P34Q6PK57 102 aa16.46■□□□□ 0.23
LPCAT3-210ENST00000540090 DPY19L2P2Q6ZN68 376 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms