RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 C14orf28Q4W4Y0 310 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 PDZD11Q5EBL8 140 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 SGPP2Q8IWX5 399 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 SPACA1Q9HBV2 294 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 PLEKHJ1Q9NW61 149 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 PILRAQ9UKJ1 303 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 KLK13Q9UKR3 277 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 ALPK3Q96L96 1907 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 SHISA8B8ZZ34 492 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 G3V3Q6 166 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 CT45A8P0DMV1 189 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 CT45A9P0DMV2 189 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 NQO2P16083 231 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 ABOP16442 354 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 CD1CP29017 333 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 RAB2AP61019 212 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 CT45A2Q5DJT8 189 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 JMJD6Q6NYC1 403 aaPredicted RBP11.64□□□□□ -0.55
MSH6-210ENST00000540021 C16orf47Q6ZP98 133 aaPredicted RBP11.64□□□□□ -0.55
MSH6-210ENST00000540021 BATF2Q8N1L9 274 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 PFDN5Q99471 154 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 WDR13Q9H1Z4 485 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 PTGES2Q9H7Z7 377 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 EXOSC3Q9NQT5 275 aaKnown RBP11.64□□□□□ -0.55
MSH6-210ENST00000540021 UQCC1Q9NVA1 299 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 VSTM2BA6NLU5 285 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 PLRG1O43660 514 aaKnown RBP11.64□□□□□ -0.55
MSH6-210ENST00000540021 ZNF41P51814 821 aaPredicted RBP11.64□□□□□ -0.55
MSH6-210ENST00000540021 ACY1Q03154 408 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 RAB32Q13637 225 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 TSC22D1Q15714 1073 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.64□□□□□ -0.55
MSH6-210ENST00000540021 ASB5Q8WWX0 329 aa11.64□□□□□ -0.55
MSH6-210ENST00000540021 HTTP42858 3142 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 KIR2DS5A0A0G2JLQ3 304 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 A0A0G2JNG1 304 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 KIR2DS3K7RE56 304 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 ZNF44P15621 663 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 KIR2DS5Q14953 304 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 FAM213BQ8TBF2 198 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 RXFP4Q8TDU9 374 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 RNF128Q8TEB7 428 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 FGF14Q92915 247 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 DMRTA2Q96SC8 542 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.63□□□□□ -0.55
MSH6-210ENST00000540021 GDF2Q9UK05 429 aaPredicted RBP11.63□□□□□ -0.55
MSH6-210ENST00000540021 RBM7Q9Y580 266 aaKnown RBP11.63□□□□□ -0.55
MSH6-210ENST00000540021 WIF1Q9Y5W5 379 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 PIAS3Q9Y6X2 628 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 WDR87Q6ZQQ6 2873 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 RNASEK-C17orf49H0YIS7 233 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 JMJD7P0C870 316 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 RPS4Y1P22090 263 aaKnown RBP11.63□□□□□ -0.55
MSH6-210ENST00000540021 VAMP2P63027 116 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 ZNF117Q03924 483 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 USF2Q15853 346 aaPredicted RBP11.63□□□□□ -0.55
MSH6-210ENST00000540021 ZNF674Q2M3X9 581 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 FAM69BQ5VUD6 431 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 RPL7L1Q6DKI1 246 aaKnown RBP11.63□□□□□ -0.55
MSH6-210ENST00000540021 SFT2D1Q8WV19 159 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 ZNF275Q9NSD4 429 aaPredicted RBP11.63□□□□□ -0.55
MSH6-210ENST00000540021 TRAV14DV4A0A0A6YYC5 116 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 OR6C65A6NJZ3 312 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 EFEMP2O95967 443 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 FBLP22087 321 aaKnown RBP11.63□□□□□ -0.55
MSH6-210ENST00000540021 ZNF141Q15928 474 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 FHL5Q5TD97 284 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 EXD3Q8N9H8 876 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 PIGTQ969N2 578 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 OR5B2Q96R09 309 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 ICAM5Q9UMF0 924 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 R4GMQ9 66 aa11.63□□□□□ -0.55
MSH6-210ENST00000540021 RAB19A4D1S5 217 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 XRCC2O43543 280 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 TLX3O43711 291 aaPredicted RBP11.62□□□□□ -0.55
MSH6-210ENST00000540021 LYPD3O95274 346 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 DIRAS3O95661 229 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 GFERP55789 205 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 PJVKQ0ZLH3 352 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 CLINT1Q14677 625 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 EMC4Q5J8M3 183 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 PGAP1Q75T13 922 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 NKAIN3Q8N8D7 197 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 SLAMF6Q96DU3 332 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 C1orf198Q9H425 327 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 SERINC1Q9NRX5 453 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 CPED1A4D0V7 1026 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 A8MVM7 634 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 ZNF205O95201 554 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 CRHP06850 196 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 NAT2P11245 290 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 GLRA1P23415 457 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 ASCL1P50553 236 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 POLR2HP52434 150 aaKnown RBP11.62□□□□□ -0.55
MSH6-210ENST00000540021 ATG4DQ86TL0 474 aaPredicted RBP11.62□□□□□ -0.55
MSH6-210ENST00000540021 SUMF1Q8NBK3 374 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 TERB2Q8NHR7 220 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 SECTM1Q8WVN6 248 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 AUP1Q9Y679 476 aa11.62□□□□□ -0.55
MSH6-210ENST00000540021 NXPH3O95157 252 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms