RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 OR6V1Q8N148 313 aa12.83□□□□□ -0.36
UBE3B-211ENST00000539843 LINC00471Q8N535 108 aa12.83□□□□□ -0.36
UBE3B-211ENST00000539843 PROKR2Q8NFJ6 384 aa12.83□□□□□ -0.36
UBE3B-211ENST00000539843 GNPDA2Q8TDQ7 276 aa12.83□□□□□ -0.36
UBE3B-211ENST00000539843 RAB40AQ8WXH6 277 aa12.83□□□□□ -0.36
UBE3B-211ENST00000539843 ZNF747Q9BV97 191 aa12.83□□□□□ -0.36
UBE3B-211ENST00000539843 WDR76Q9H967 626 aa12.83□□□□□ -0.36
UBE3B-211ENST00000539843 FN3KRPQ9HA64 309 aa12.83□□□□□ -0.36
UBE3B-211ENST00000539843 TMEM165Q9HC07 324 aa12.83□□□□□ -0.36
UBE3B-211ENST00000539843 DYSFO75923 2080 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 M0R135 149 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 PHYHO14832 338 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 KRT36O76013 467 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 ZNF205O95201 554 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 GPANK1O95872 356 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 ACSM4P0C7M7 580 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 RRM2P31350 389 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 GATA4P43694 442 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 NPY4RP50391 375 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 FXYD6P3P58550 94 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 IL13RA1P78552 427 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 MXRA7P84157 204 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 GK2Q14410 553 aaPredicted RBP12.82□□□□□ -0.36
UBE3B-211ENST00000539843 TAF13Q15543 124 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 OR8G1Q15617 311 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 DCDC5Q6ZRR9 648 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 CPLX4Q7Z7G2 160 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 ZBTB46Q86UZ6 589 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 SDR9C7Q8NEX9 313 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 OR2T4Q8NH00 348 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 ZDHHC16Q969W1 377 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 SLCO4A1Q96BD0 722 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 ZNF799Q96GE5 643 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 NUDT16L1Q9BRJ7 211 aaKnown RBP12.82□□□□□ -0.36
UBE3B-211ENST00000539843 TMEM246Q9BRR3 403 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 ZNF446Q9NWS9 450 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 CYB5R1Q9UHQ9 305 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 PCDHGB1Q9Y5G3 927 aa12.82□□□□□ -0.36
UBE3B-211ENST00000539843 TRAV40A0A0B4J280 105 aa12.81□□□□□ -0.36
UBE3B-211ENST00000539843 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.81□□□□□ -0.36
UBE3B-211ENST00000539843 IGHV3-64DA0A0J9YX35 117 aa12.81□□□□□ -0.36
UBE3B-211ENST00000539843 GGT3PA6NGU5 568 aa12.81□□□□□ -0.36
UBE3B-211ENST00000539843 H0YL77 283 aa12.81□□□□□ -0.36
UBE3B-211ENST00000539843 CLDN34H7C241 214 aa12.81□□□□□ -0.36
UBE3B-211ENST00000539843 DCTN6O00399 190 aa12.81□□□□□ -0.36
UBE3B-211ENST00000539843 MLNRO43193 412 aa12.81□□□□□ -0.36
UBE3B-211ENST00000539843 ENSAO43768 121 aaKnown RBP12.81□□□□□ -0.36
UBE3B-211ENST00000539843 HLA-DPB1P04440 258 aa12.81□□□□□ -0.36
UBE3B-211ENST00000539843 RNASE1P07998 156 aaKnown RBP12.81□□□□□ -0.36
UBE3B-211ENST00000539843 HSD17B1P14061 328 aa12.81□□□□□ -0.36
UBE3B-211ENST00000539843 BPIFB3P59826 476 aa12.81□□□□□ -0.36
UBE3B-211ENST00000539843 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.81□□□□□ -0.36
UBE3B-211ENST00000539843 TSPAN31Q12999 210 aa12.81□□□□□ -0.36
UBE3B-211ENST00000539843 GPR157Q5UAW9 335 aa12.81□□□□□ -0.36
UBE3B-211ENST00000539843 CD276Q5ZPR3 534 aa12.81□□□□□ -0.36
UBE3B-211ENST00000539843 C16orf89Q6UX73 402 aa12.81□□□□□ -0.36
UBE3B-211ENST00000539843 ZNF620Q6ZNG0 422 aa12.81□□□□□ -0.36
UBE3B-211ENST00000539843 CFAP77Q6ZQR2 320 aa12.81□□□□□ -0.36
UBE3B-211ENST00000539843 COLCA1Q6ZS62 124 aa12.81□□□□□ -0.36
UBE3B-211ENST00000539843 PGAM4Q8N0Y7 254 aa12.81□□□□□ -0.36
UBE3B-211ENST00000539843 FAM86B1Q8N7N1 296 aa12.81□□□□□ -0.36
UBE3B-211ENST00000539843 SPERTQ8NA61 448 aa12.81□□□□□ -0.36
UBE3B-211ENST00000539843 Q8TCH9 128 aa12.81□□□□□ -0.36
UBE3B-211ENST00000539843 UPRTQ96BW1 309 aa12.81□□□□□ -0.36
UBE3B-211ENST00000539843 DUX5Q96PT3 197 aa12.81□□□□□ -0.36
UBE3B-211ENST00000539843 MYLK2Q9H1R3 596 aa12.81□□□□□ -0.36
UBE3B-211ENST00000539843 MMADHCQ9H3L0 296 aaPredicted RBP12.81□□□□□ -0.36
UBE3B-211ENST00000539843 OPA3Q9H6K4 179 aa12.81□□□□□ -0.36
UBE3B-211ENST00000539843 ERVK-18Q9QC07 812 aa12.81□□□□□ -0.36
UBE3B-211ENST00000539843 KIR2DS1A0A191URI9 304 aa12.8□□□□□ -0.36
UBE3B-211ENST00000539843 GMDSO60547 372 aa12.8□□□□□ -0.36
UBE3B-211ENST00000539843 EGR1P18146 543 aa12.8□□□□□ -0.36
UBE3B-211ENST00000539843 CD80P33681 288 aa12.8□□□□□ -0.36
UBE3B-211ENST00000539843 CD200P41217 278 aa12.8□□□□□ -0.36
UBE3B-211ENST00000539843 SPATS1Q496A3 300 aa12.8□□□□□ -0.36
UBE3B-211ENST00000539843 KLF17Q5JT82 389 aaPredicted RBP12.8□□□□□ -0.36
UBE3B-211ENST00000539843 CLEC12AQ5QGZ9 265 aa12.8□□□□□ -0.36
UBE3B-211ENST00000539843 SLC35F1Q5T1Q4 408 aa12.8□□□□□ -0.36
UBE3B-211ENST00000539843 C9orf139Q6ZV77 190 aa12.8□□□□□ -0.36
UBE3B-211ENST00000539843 ZDHHC21Q8IVQ6 265 aa12.8□□□□□ -0.36
UBE3B-211ENST00000539843 TECTBQ96PL2 329 aa12.8□□□□□ -0.36
UBE3B-211ENST00000539843 FUZQ9BT04 418 aa12.8□□□□□ -0.36
UBE3B-211ENST00000539843 COPS4Q9BT78 406 aa12.8□□□□□ -0.36
UBE3B-211ENST00000539843 ADAT1Q9BUB4 502 aaKnown RBP12.8□□□□□ -0.36
UBE3B-211ENST00000539843 SP140LQ9H930 580 aa12.8□□□□□ -0.36
UBE3B-211ENST00000539843 IL1RAPQ9NPH3 570 aa12.8□□□□□ -0.36
UBE3B-211ENST00000539843 RNF7Q9UBF6 113 aa12.8□□□□□ -0.36
UBE3B-211ENST00000539843 CDH10Q9Y6N8 788 aa12.8□□□□□ -0.36
UBE3B-211ENST00000539843 IGHV3OR16-10A0A075B7F0 116 aa12.79□□□□□ -0.36
UBE3B-211ENST00000539843 OR6C68A6NDL8 312 aa12.79□□□□□ -0.36
UBE3B-211ENST00000539843 POM121CA8CG34 1229 aa12.79□□□□□ -0.36
UBE3B-211ENST00000539843 ARPC2O15144 300 aa12.79□□□□□ -0.36
UBE3B-211ENST00000539843 NDUFA2O43678 99 aa12.79□□□□□ -0.36
UBE3B-211ENST00000539843 CRYBA1P05813 215 aa12.79□□□□□ -0.36
UBE3B-211ENST00000539843 LIPFP07098 398 aa12.79□□□□□ -0.36
UBE3B-211ENST00000539843 GSSP48637 474 aa12.79□□□□□ -0.36
UBE3B-211ENST00000539843 MNAT1P51948 309 aa12.79□□□□□ -0.36
UBE3B-211ENST00000539843 HNRNPA0Q13151 305 aaKnown RBP12.79□□□□□ -0.36
UBE3B-211ENST00000539843 OR8B8Q15620 311 aa12.79□□□□□ -0.36
UBE3B-211ENST00000539843 KRTAP27-1Q3LI81 207 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms