RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 ZNF420Q8TAQ5 688 aaPredicted RBP11.19□□□□□ -0.62
CCDC42-202ENST00000539522 TMEM171Q8WVE6 324 aa11.19□□□□□ -0.62
CCDC42-202ENST00000539522 RNF133Q8WVZ7 376 aa11.19□□□□□ -0.62
CCDC42-202ENST00000539522 GATAD2BQ8WXI9 593 aa11.19□□□□□ -0.62
CCDC42-202ENST00000539522 SLAMF6Q96DU3 332 aa11.19□□□□□ -0.62
CCDC42-202ENST00000539522 YIPF6Q96EC8 236 aa11.19□□□□□ -0.62
CCDC42-202ENST00000539522 COQ7Q99807 217 aa11.19□□□□□ -0.62
CCDC42-202ENST00000539522 ALG8Q9BVK2 526 aa11.19□□□□□ -0.62
CCDC42-202ENST00000539522 TTTY10Q9BZA0 68 aa11.19□□□□□ -0.62
CCDC42-202ENST00000539522 BABAM2Q9NXR7 383 aa11.19□□□□□ -0.62
CCDC42-202ENST00000539522 PLEK2Q9NYT0 353 aa11.19□□□□□ -0.62
CCDC42-202ENST00000539522 FBXL3Q9UKT7 428 aa11.19□□□□□ -0.62
CCDC42-202ENST00000539522 POLR1DQ9Y2S0 133 aa11.19□□□□□ -0.62
CCDC42-202ENST00000539522 CCDC160A6NGH7 325 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 HS3ST1O14792 307 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 SMPD2O60906 423 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 MT-ND5P03915 603 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 SOD3P08294 240 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 TACSTD2P09758 323 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 ACSM4P0C7M7 580 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 FAM157BP0CG42 384 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 THBS4P35443 961 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 HTR5AP47898 357 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 GTF2A1P52655 376 aaPredicted RBP11.18□□□□□ -0.62
CCDC42-202ENST00000539522 ACTA2P62736 377 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 ACTG2P63267 376 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 ZNF85Q03923 595 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 MLLT11Q13015 90 aaPredicted RBP11.18□□□□□ -0.62
CCDC42-202ENST00000539522 GPR50Q13585 617 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 DOC2BQ14184 412 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 EIF2B1Q14232 305 aaKnown RBP11.18□□□□□ -0.62
CCDC42-202ENST00000539522 ADIPOQQ15848 244 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 OR2G6Q5TZ20 316 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 GPR107Q5VW38 600 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 SLC22A25Q6T423 547 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 PLEKHG7Q6ZR37 379 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 COLCA1Q6ZS62 124 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 LRP11Q86VZ4 500 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 ANKRD13BQ86YJ7 626 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 CLVS1Q8IUQ0 354 aaPredicted RBP11.18□□□□□ -0.62
CCDC42-202ENST00000539522 SYS1Q8N2H4 156 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 NUP37Q8NFH4 326 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 SNX33Q8WV41 574 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 ASB17Q8WXJ9 295 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 TBX5Q99593 518 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 ATF6BQ99941 703 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 CDADC1Q9BWV3 514 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 HDHD2Q9H0R4 259 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 RBM38Q9H0Z9 239 aaKnown RBP11.18□□□□□ -0.62
CCDC42-202ENST00000539522 OR51B6Q9H340 312 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 C1orf198Q9H425 327 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 MOV10Q9HCE1 1003 aaKnown RBP11.18□□□□□ -0.62
CCDC42-202ENST00000539522 SLCO1C1Q9NYB5 712 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 ZNF319Q9P2F9 582 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 MYEF2Q9P2K5 600 aaKnown RBP11.18□□□□□ -0.62
CCDC42-202ENST00000539522 ATPIF1Q9UII2 106 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 LAMP5Q9UJQ1 280 aa11.18□□□□□ -0.62
CCDC42-202ENST00000539522 IQCMA0A1B0GVH7 501 aa11.17□□□□□ -0.62
CCDC42-202ENST00000539522 PSMD9O00233 223 aa11.17□□□□□ -0.62
CCDC42-202ENST00000539522 SRSF10O75494 262 aaKnown RBP11.17□□□□□ -0.62
CCDC42-202ENST00000539522 ABHD16AO95870 558 aa11.17□□□□□ -0.62
CCDC42-202ENST00000539522 CRYAAP02489 173 aa11.17□□□□□ -0.62
CCDC42-202ENST00000539522 CD36P16671 472 aa11.17□□□□□ -0.62
CCDC42-202ENST00000539522 RGS6P49758 472 aa11.17□□□□□ -0.62
CCDC42-202ENST00000539522 BDH1Q02338 343 aa11.17□□□□□ -0.62
CCDC42-202ENST00000539522 SNTB2Q13425 540 aaKnown RBP11.17□□□□□ -0.62
CCDC42-202ENST00000539522 TPBGQ13641 420 aa11.17□□□□□ -0.62
CCDC42-202ENST00000539522 FOXB2Q5VYV0 432 aa11.17□□□□□ -0.62
CCDC42-202ENST00000539522 C11orf71Q6IPW1 123 aa11.17□□□□□ -0.62
CCDC42-202ENST00000539522 LRRN1Q6UXK5 716 aa11.17□□□□□ -0.62
CCDC42-202ENST00000539522 IL17RDQ8NFM7 739 aa11.17□□□□□ -0.62
CCDC42-202ENST00000539522 OR2AJ1Q8NGZ0 328 aa11.17□□□□□ -0.62
CCDC42-202ENST00000539522 HAVCR2Q8TDQ0 301 aa11.17□□□□□ -0.62
CCDC42-202ENST00000539522 SPRYD4Q8WW59 207 aaPredicted RBP11.17□□□□□ -0.62
CCDC42-202ENST00000539522 RADILQ96JH8 1075 aa11.17□□□□□ -0.62
CCDC42-202ENST00000539522 LURAP1Q96LR2 239 aa11.17□□□□□ -0.62
CCDC42-202ENST00000539522 BCL7BQ9BQE9 202 aa11.17□□□□□ -0.62
CCDC42-202ENST00000539522 FUNDC2Q9BWH2 189 aa11.17□□□□□ -0.62
CCDC42-202ENST00000539522 CA10Q9NS85 328 aa11.17□□□□□ -0.62
CCDC42-202ENST00000539522 CISD1Q9NZ45 108 aaKnown RBP11.17□□□□□ -0.62
CCDC42-202ENST00000539522 RSL24D1Q9UHA3 163 aaKnown RBP11.17□□□□□ -0.62
CCDC42-202ENST00000539522 ATP23Q9Y6H3 246 aa11.17□□□□□ -0.62
CCDC42-202ENST00000539522 ZNF469Q96JG9 3925 aaPredicted RBP11.17□□□□□ -0.62
CCDC42-202ENST00000539522 AKAP6Q13023 2319 aa11.17□□□□□ -0.62
CCDC42-202ENST00000539522 DSCAMO60469 2012 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 ARFGEF3Q5TH69 2177 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 J3QLW9 94 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 CCRL2O00421 344 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 NOL3O60936 208 aaKnown RBP11.16□□□□□ -0.62
CCDC42-202ENST00000539522 SULT1C4O75897 302 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 CPEP16870 476 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 ZNF19P17023 458 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 CCNOP22674 350 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 PCSK6P29122 969 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 APLNRP35414 380 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 LIPAP38571 399 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 GDI2P50395 445 aaKnown RBP11.16□□□□□ -0.62
CCDC42-202ENST00000539522 GBX2P52951 348 aaPredicted RBP11.16□□□□□ -0.62
CCDC42-202ENST00000539522 UCP2P55851 309 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 ROM1Q03395 351 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms