RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 SLC6A9P48067 706 aa13.42□□□□□ -0.26
RPAIN-206ENST00000539417 CX3CR1P49238 355 aa13.42□□□□□ -0.26
RPAIN-206ENST00000539417 CDC42P60953 191 aa13.42□□□□□ -0.26
RPAIN-206ENST00000539417 CCL8P80075 99 aa13.42□□□□□ -0.26
RPAIN-206ENST00000539417 GK2Q14410 553 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-206ENST00000539417 TAF13Q15543 124 aa13.42□□□□□ -0.26
RPAIN-206ENST00000539417 TSTQ16762 297 aaKnown RBP13.42□□□□□ -0.26
RPAIN-206ENST00000539417 LCN1P1Q5VSP4 162 aa13.42□□□□□ -0.26
RPAIN-206ENST00000539417 DRAM2Q6UX65 266 aa13.42□□□□□ -0.26
RPAIN-206ENST00000539417 UNQ6126/PRO20091Q6UXV3 157 aa13.42□□□□□ -0.26
RPAIN-206ENST00000539417 FBXW12Q6X9E4 464 aa13.42□□□□□ -0.26
RPAIN-206ENST00000539417 SSX6Q7RTT6 188 aa13.42□□□□□ -0.26
RPAIN-206ENST00000539417 ZNF283Q8N7M2 679 aa13.42□□□□□ -0.26
RPAIN-206ENST00000539417 OR51G2Q8NGK0 314 aa13.42□□□□□ -0.26
RPAIN-206ENST00000539417 C10orf105Q8TEF2 133 aa13.42□□□□□ -0.26
RPAIN-206ENST00000539417 YIPF3Q9GZM5 350 aa13.42□□□□□ -0.26
RPAIN-206ENST00000539417 MS4A5Q9H3V2 200 aa13.42□□□□□ -0.26
RPAIN-206ENST00000539417 SLCO1C1Q9NYB5 712 aa13.42□□□□□ -0.26
RPAIN-206ENST00000539417 H2AFY2Q9P0M6 372 aaPredicted RBP13.42□□□□□ -0.26
RPAIN-206ENST00000539417 GMPPBQ9Y5P6 360 aa13.42□□□□□ -0.26
RPAIN-206ENST00000539417 A0A096LNT2 108 aa13.41□□□□□ -0.26
RPAIN-206ENST00000539417 SLC22A31A6NKX4 558 aa13.41□□□□□ -0.26
RPAIN-206ENST00000539417 TIMM8AO60220 97 aaPredicted RBP13.41□□□□□ -0.26
RPAIN-206ENST00000539417 CLIC3O95833 236 aa13.41□□□□□ -0.26
RPAIN-206ENST00000539417 DAOP14920 347 aa13.41□□□□□ -0.26
RPAIN-206ENST00000539417 HTR1FP30939 366 aa13.41□□□□□ -0.26
RPAIN-206ENST00000539417 ZNF81P51508 661 aa13.41□□□□□ -0.26
RPAIN-206ENST00000539417 SELENOVP59797 346 aa13.41□□□□□ -0.26
RPAIN-206ENST00000539417 ZNF92Q03936 586 aa13.41□□□□□ -0.26
RPAIN-206ENST00000539417 CARTPTQ16568 116 aa13.41□□□□□ -0.26
RPAIN-206ENST00000539417 GLYATL3Q5SZD4 288 aa13.41□□□□□ -0.26
RPAIN-206ENST00000539417 OGFRL1Q5TC84 451 aaPredicted RBP13.41□□□□□ -0.26
RPAIN-206ENST00000539417 SLC35F2Q8IXU6 374 aa13.41□□□□□ -0.26
RPAIN-206ENST00000539417 C1orf174Q8IYL3 243 aa13.41□□□□□ -0.26
RPAIN-206ENST00000539417 ENTHD1Q8IYW4 607 aa13.41□□□□□ -0.26
RPAIN-206ENST00000539417 ZNF454Q8N9F8 522 aa13.41□□□□□ -0.26
RPAIN-206ENST00000539417 NEU4Q8WWR8 484 aaPredicted RBP13.41□□□□□ -0.26
RPAIN-206ENST00000539417 YIPF5Q969M3 257 aa13.41□□□□□ -0.26
RPAIN-206ENST00000539417 CNN2Q99439 309 aaKnown RBP13.41□□□□□ -0.26
RPAIN-206ENST00000539417 GSX1Q9H4S2 264 aaPredicted RBP13.41□□□□□ -0.26
RPAIN-206ENST00000539417 BRD7Q9NPI1 651 aa13.41□□□□□ -0.26
RPAIN-206ENST00000539417 IMPAD1Q9NX62 359 aa13.41□□□□□ -0.26
RPAIN-206ENST00000539417 LAMP5Q9UJQ1 280 aa13.41□□□□□ -0.26
RPAIN-206ENST00000539417 LRP12Q9Y561 859 aa13.41□□□□□ -0.26
RPAIN-206ENST00000539417 CACNG2Q9Y698 323 aa13.41□□□□□ -0.26
RPAIN-206ENST00000539417 CR1P17927 2039 aa13.41□□□□□ -0.26
RPAIN-206ENST00000539417 ANK3Q12955 4377 aaKnown RBP13.4□□□□□ -0.26
RPAIN-206ENST00000539417 LOC100130705A0A1B0GUX0 176 aa13.4□□□□□ -0.26
RPAIN-206ENST00000539417 H3BSA7 217 aa13.4□□□□□ -0.26
RPAIN-206ENST00000539417 J3QW42 95 aa13.4□□□□□ -0.26
RPAIN-206ENST00000539417 CASQ2O14958 399 aaPredicted RBP13.4□□□□□ -0.26
RPAIN-206ENST00000539417 H2BFMP0C1H6 154 aa13.4□□□□□ -0.26
RPAIN-206ENST00000539417 SBK2P0C263 348 aa13.4□□□□□ -0.26
RPAIN-206ENST00000539417 RAC2P15153 192 aa13.4□□□□□ -0.26
RPAIN-206ENST00000539417 ZNF121P58317 390 aaPredicted RBP13.4□□□□□ -0.26
RPAIN-206ENST00000539417 GRB2P62993 217 aaKnown RBP13.4□□□□□ -0.26
RPAIN-206ENST00000539417 USP51Q70EK9 711 aa13.4□□□□□ -0.26
RPAIN-206ENST00000539417 GID4Q8IVV7 300 aa13.4□□□□□ -0.26
RPAIN-206ENST00000539417 BHLHE23Q8NDY6 225 aa13.4□□□□□ -0.26
RPAIN-206ENST00000539417 NRG4Q8WWG1 115 aa13.4□□□□□ -0.26
RPAIN-206ENST00000539417 COX4I2Q96KJ9 171 aa13.4□□□□□ -0.26
RPAIN-206ENST00000539417 TBX5Q99593 518 aa13.4□□□□□ -0.26
RPAIN-206ENST00000539417 SMPD3Q9NY59 655 aaPredicted RBP13.4□□□□□ -0.26
RPAIN-206ENST00000539417 HAO2Q9NYQ3 351 aa13.4□□□□□ -0.26
RPAIN-206ENST00000539417 TREM2Q9NZC2 230 aa13.4□□□□□ -0.26
RPAIN-206ENST00000539417 H0YL77 283 aa13.39□□□□□ -0.27
RPAIN-206ENST00000539417 SLC16A6O15403 523 aa13.39□□□□□ -0.27
RPAIN-206ENST00000539417 HSD11B1P28845 292 aa13.39□□□□□ -0.27
RPAIN-206ENST00000539417 SNRPGP62308 76 aaKnown RBP13.39□□□□□ -0.27
RPAIN-206ENST00000539417 CLEC2AQ6UVW9 174 aa13.39□□□□□ -0.27
RPAIN-206ENST00000539417 PLEKHG7Q6ZR37 379 aa13.39□□□□□ -0.27
RPAIN-206ENST00000539417 FAM57BQ71RH2 274 aa13.39□□□□□ -0.27
RPAIN-206ENST00000539417 OR5L1Q8NGL2 311 aa13.39□□□□□ -0.27
RPAIN-206ENST00000539417 UBASH3BQ8TF42 649 aa13.39□□□□□ -0.27
RPAIN-206ENST00000539417 SNX33Q8WV41 574 aa13.39□□□□□ -0.27
RPAIN-206ENST00000539417 APH1BQ8WW43 257 aa13.39□□□□□ -0.27
RPAIN-206ENST00000539417 FAM168AQ92567 244 aa13.39□□□□□ -0.27
RPAIN-206ENST00000539417 PPP1R14AQ96A00 147 aa13.39□□□□□ -0.27
RPAIN-206ENST00000539417 APOL4Q9BPW4 351 aa13.39□□□□□ -0.27
RPAIN-206ENST00000539417 RHNO1Q9BSD3 238 aa13.39□□□□□ -0.27
RPAIN-206ENST00000539417 SOX7Q9BT81 388 aa13.39□□□□□ -0.27
RPAIN-206ENST00000539417 REG4Q9BYZ8 158 aa13.39□□□□□ -0.27
RPAIN-206ENST00000539417 WARS2Q9UGM6 360 aaKnown RBP13.39□□□□□ -0.27
RPAIN-206ENST00000539417 VWC2LB2RUY7 222 aa13.38□□□□□ -0.27
RPAIN-206ENST00000539417 MLNRO43193 412 aa13.38□□□□□ -0.27
RPAIN-206ENST00000539417 TBX1O43435 398 aa13.38□□□□□ -0.27
RPAIN-206ENST00000539417 CDC14BO60729 498 aa13.38□□□□□ -0.27
RPAIN-206ENST00000539417 ANXA2P07355 339 aaKnown RBP13.38□□□□□ -0.27
RPAIN-206ENST00000539417 TUBG1P23258 451 aa13.38□□□□□ -0.27
RPAIN-206ENST00000539417 SLC15A1P46059 708 aa13.38□□□□□ -0.27
RPAIN-206ENST00000539417 CXCR4P61073 352 aa13.38□□□□□ -0.27
RPAIN-206ENST00000539417 CDK5R2Q13319 367 aa13.38□□□□□ -0.27
RPAIN-206ENST00000539417 KRT77Q7Z794 578 aa13.38□□□□□ -0.27
RPAIN-206ENST00000539417 ZNF786Q8N393 782 aa13.38□□□□□ -0.27
RPAIN-206ENST00000539417 RHOXF1Q8NHV9 184 aa13.38□□□□□ -0.27
RPAIN-206ENST00000539417 TRUB1Q8WWH5 349 aaKnown RBP13.38□□□□□ -0.27
RPAIN-206ENST00000539417 SGK3Q96BR1 496 aa13.38□□□□□ -0.27
RPAIN-206ENST00000539417 C18orf12Q96KH6 178 aa13.38□□□□□ -0.27
RPAIN-206ENST00000539417 COG8Q96MW5 612 aa13.38□□□□□ -0.27
RPAIN-206ENST00000539417 OR8B4Q96RC9 309 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms