RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 MS4A4EQ96PG1 132 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TSG101Q99816 390 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 MAPKAP1Q9BPZ7 522 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TSSK1BQ9BXA7 367 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 WDR54Q9H977 334 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 HMG20AQ9NP66 347 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TNFRSF19Q9NS68 423 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TAS2R7Q9NYW3 318 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 WARS2Q9UGM6 360 aaKnown RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 KIF25Q9UIL4 384 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 SLC22A14Q9Y267 594 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 MAD1L1Q9Y6D9 718 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 V9GYY5 206 aaPredicted RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TRPM1Q7Z4N2 1603 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 ASH1LQ9NR48 2969 aaKnown RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 MYH7BA7E2Y1 1941 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 IQANK1A0A1B0GTG1 560 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 FAM168BA1KXE4 195 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 RBMY1BA6NDE4 496 aaKnown RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 RBMY1EA6NEQ0 496 aaKnown RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 H3BSA7 217 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 CDC7O00311 574 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 SCAMP2O15127 329 aaKnown RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 CETN3O15182 167 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TNFSF13O75888 250 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 SEMA3DO95025 777 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 LRATO95237 230 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 CD3GP09693 182 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 RBMY1DP0C7P1 496 aaKnown RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 RBMY1A1P0DJD3 496 aaKnown RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 GIMD1P0DJR0 217 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 HSD17B1P14061 328 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 ACADSP16219 412 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF3P17036 446 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 DCKP27707 260 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 GCAP28676 217 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 GABRA4P48169 554 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 SYNJ2BPP57105 145 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 RAB11AP62491 216 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF92Q03936 586 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TSPAN31Q12999 210 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 SLC1A5Q15758 541 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 RAB11BQ15907 218 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 IMPG1Q17R60 797 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 DEFB115Q30KQ5 88 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TPRG1LQ5T0D9 272 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 MOB1BQ7L9L4 216 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 MRPL21Q7Z2W9 205 aaKnown RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 ATP6V0D2Q8N8Y2 350 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 FGF11Q92914 225 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 MYDGFQ969H8 173 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 CXorf40BQ96DE9 158 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 ASB9Q96DX5 294 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 CATSPER2Q96P56 530 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 EBF4Q9BQW3 602 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 RSG1Q9BU20 258 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 NMRAL1Q9HBL8 299 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 WFDC1Q9HC57 220 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 MED4Q9NPJ6 270 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 RMND1Q9NWS8 449 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 CHMP5Q9NZZ3 219 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF229Q9UJW7 825 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TP53TG3Q9ULZ0 132 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 MMP17Q9ULZ9 603 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 PACSIN2Q9UNF0 486 aaPredicted RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 HYOU1Q9Y4L1 999 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF646O15015 1829 aaPredicted RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 BIRC6Q9NR09 4857 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 MAGI1Q96QZ7 1491 aaPredicted RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 SPATA31E1Q6ZUB1 1445 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 PALLDQ8WX93 1383 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 ABCC11Q96J66 1382 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 IGHV3OR16-13A0A075B7E8 117 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 IGHV3-74A0A0B4J1X5 117 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 A0A1B0GW55 424 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 FAM47DPA6NHR8 397 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 LRRIQ3A6PVS8 624 aaPredicted RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 E7ENQ6 273 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TMEM250H0YL14 139 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 H3BNH8 94 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TNFRSF11BO00300 401 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 UPK1AO00322 258 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 DCTN6O00399 190 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TOR1AO14656 332 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 SLC37A4O43826 429 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF189O75820 626 aaPredicted RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 OR5F1O95221 314 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 YEATS4O95619 227 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 HLA-HP01893 362 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 DUX4L2P0CJ85 424 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 DUX4L3P0CJ86 424 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 DUX4L4P0CJ87 422 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 DUX4L5P0CJ88 424 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 DUX4L6P0CJ89 424 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 DUX4L7P0CJ90 424 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 COX5BP10606 129 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 RALBP11234 206 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 MGMTP16455 207 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 EIF2S2P20042 333 aaKnown RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 PSMB1P20618 241 aaKnown RBP0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms