RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 RPL34P49207 117 aaKnown RBP6.3□□□□□ -1.4
SORT1-209ENST00000538502 CSNK1G2P78368 415 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 DLK1P80370 383 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 ST3GAL2Q16842 350 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 IGSF11Q5DX21 431 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 PRAMEF5Q5TYX0 476 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 PRAMEF6Q5VXH4 476 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 BTNL3Q6UXE8 466 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 ZNF511Q8NB15 262 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 MRPL38Q96DV4 380 aaKnown RBP6.3□□□□□ -1.4
SORT1-209ENST00000538502 MS4A10Q96PG2 267 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 TRIB1Q96RU8 372 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 PRRX2Q99811 253 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 SLC2A9Q9NRM0 540 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 N4BP2Q86UW6 1770 aaPredicted RBP6.3□□□□□ -1.4
SORT1-209ENST00000538502 RGPD5Q99666 1765 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 PLPP2O43688 288 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 HSBP1O75506 76 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 CRYBB2P43320 205 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 SSR4P51571 173 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 C1orf61Q13536 156 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 ATP6V1FQ16864 119 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 TMEM81Q6P7N7 255 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 PRSS54Q6PEW0 395 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 CD300LDQ6UXZ3 194 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 ADIPOR1Q96A54 375 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 SLAMF6Q96DU3 332 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 PAAF1Q9BRP4 392 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 ULBP3Q9BZM4 244 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 WDR61Q9GZS3 305 aaKnown RBP6.3□□□□□ -1.4
SORT1-209ENST00000538502 NXF2Q9GZY0 626 aaKnown RBP6.3□□□□□ -1.4
SORT1-209ENST00000538502 SLCO1B1Q9Y6L6 691 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 TARM1B6A8C7 271 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 PYCARD-AS1I3L0S3 204 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 GP1BAP07359 652 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 SLC25A6P12236 298 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 HIST1H1CP16403 213 aaKnown RBP6.3□□□□□ -1.4
SORT1-209ENST00000538502 RPEL1Q2QD12 228 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 TMEM207Q6UWW9 146 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 DPPA3Q6W0C5 159 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 DGAT2L6Q6ZPD8 337 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 NKAIN4Q8IVV8 208 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 ARIH2OSQ8N7S6 290 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 FOXN4Q96NZ1 517 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 RAB40CQ96S21 281 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 ATG101Q9BSB4 218 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 AUNIPQ9H7T9 357 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 LPAR3Q9UBY5 353 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 COA3Q9Y2R0 106 aaPredicted RBP6.3□□□□□ -1.4
SORT1-209ENST00000538502 GOLT1BQ9Y3E0 138 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 OR52A4PA6NMU1 304 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 PLPP1O14494 284 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 DOK2O60496 412 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 PSMB5P28074 263 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 LIM2P55344 173 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 PIGPP57054 158 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 NLGN4YQ8NFZ3 816 aaPredicted RBP6.3□□□□□ -1.4
SORT1-209ENST00000538502 HSD17B8Q92506 261 aa6.3□□□□□ -1.4
SORT1-209ENST00000538502 A0A0B4J203 849 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 DUXBA0A1W2PPF3 345 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 FITM1A5D6W6 292 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 TERTO14746 1132 aaKnown RBP6.29□□□□□ -1.4
SORT1-209ENST00000538502 INHBBP09529 407 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 RGRP47804 291 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 SLC25A1P53007 311 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 TMEM176BQ3YBM2 270 aaPredicted RBP6.29□□□□□ -1.4
SORT1-209ENST00000538502 FA2HQ7L5A8 372 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 TSEN54Q7Z6J9 526 aaKnown RBP6.29□□□□□ -1.4
SORT1-209ENST00000538502 ZNF573Q86YE8 665 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 MAML2Q8IZL2 1156 aaPredicted RBP6.29□□□□□ -1.4
SORT1-209ENST00000538502 MTURNQ8N3F0 131 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 OR4S1Q8NGB4 309 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 MARCH1Q8TCQ1 289 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 ST6GAL2Q96JF0 529 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 SDF2Q99470 211 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 ESRP2Q9H6T0 727 aaKnown RBP6.29□□□□□ -1.4
SORT1-209ENST00000538502 ZNF865P0CJ78 1059 aaPredicted RBP6.29□□□□□ -1.4
SORT1-209ENST00000538502 PCMT1P22061 227 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 CST5P28325 142 aaPredicted RBP6.29□□□□□ -1.4
SORT1-209ENST00000538502 ARR3P36575 388 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 CD200P41217 278 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 GABRA4P48169 554 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 ERHP84090 104 aaKnown RBP6.29□□□□□ -1.4
SORT1-209ENST00000538502 CLLU1OSQ5K130 101 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 ETFRF1Q6IPR1 90 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 SLC16A12Q6ZSM3 486 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 LINC00346Q8IVM7 164 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 ST8SIA1Q92185 356 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 PTDSS2Q9BVG9 487 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 MTFP1Q9UDX5 166 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 NAT8Q9UHE5 227 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 SLC17A4Q9Y2C5 497 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 DNAJC25-GNG10A0A024R161 153 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 LRRC30A6NM36 301 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 ST8SIA5O15466 376 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 DEDDO75618 318 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 PRR35P0CG20 571 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 CCL5P13501 91 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 DCTDP32321 178 aa6.29□□□□□ -1.4
SORT1-209ENST00000538502 BTG2P78543 158 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms