RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 CLRN1P58418 232 aa7.46□□□□□ -1.21
USP28-205ENST00000537706 EGR4Q05215 589 aa7.46□□□□□ -1.21
USP28-205ENST00000537706 FUT5Q11128 374 aa7.46□□□□□ -1.21
USP28-205ENST00000537706 LPCAT4Q643R3 524 aa7.46□□□□□ -1.21
USP28-205ENST00000537706 AQP12AQ8IXF9 295 aa7.46□□□□□ -1.21
USP28-205ENST00000537706 CLEC4FQ8N1N0 589 aa7.46□□□□□ -1.21
USP28-205ENST00000537706 Q8N2B8 174 aa7.46□□□□□ -1.21
USP28-205ENST00000537706 LINC00482Q8N8I6 264 aa7.46□□□□□ -1.21
USP28-205ENST00000537706 ANKFN1Q8N957 763 aa7.46□□□□□ -1.21
USP28-205ENST00000537706 OR52P1PQ8NH57 321 aa7.46□□□□□ -1.21
USP28-205ENST00000537706 SLC25A44Q96H78 314 aaPredicted RBP7.46□□□□□ -1.21
USP28-205ENST00000537706 ZBTB18Q99592 522 aa7.46□□□□□ -1.21
USP28-205ENST00000537706 PCDHAC1Q9H158 963 aa7.46□□□□□ -1.21
USP28-205ENST00000537706 MEGF9Q9H1U4 602 aa7.46□□□□□ -1.21
USP28-205ENST00000537706 SLC38A1Q9H2H9 487 aa7.46□□□□□ -1.21
USP28-205ENST00000537706 MRPL39Q9NYK5 338 aaKnown RBP7.46□□□□□ -1.21
USP28-205ENST00000537706 CALML5Q9NZT1 146 aa7.46□□□□□ -1.21
USP28-205ENST00000537706 TMCC3Q9ULS5 477 aa7.46□□□□□ -1.21
USP28-205ENST00000537706 OR10H3O60404 316 aa7.46□□□□□ -1.22
USP28-205ENST00000537706 ICMTO60725 284 aa7.46□□□□□ -1.22
USP28-205ENST00000537706 IGHG1P01857 330 aa7.46□□□□□ -1.22
USP28-205ENST00000537706 ZNF32P17041 273 aa7.46□□□□□ -1.22
USP28-205ENST00000537706 HSPA13P48723 471 aa7.46□□□□□ -1.22
USP28-205ENST00000537706 PAGE3Q5JUK9 113 aa7.46□□□□□ -1.22
USP28-205ENST00000537706 FAM201AQ5SY85 155 aa7.46□□□□□ -1.22
USP28-205ENST00000537706 ZNF836Q6ZNA1 936 aa7.46□□□□□ -1.22
USP28-205ENST00000537706 LHFPL2Q6ZUX7 228 aa7.46□□□□□ -1.22
USP28-205ENST00000537706 SLC35D2Q76EJ3 337 aa7.46□□□□□ -1.22
USP28-205ENST00000537706 OR4X2Q8NGF9 303 aa7.46□□□□□ -1.22
USP28-205ENST00000537706 AKR7LQ8NHP1 331 aa7.46□□□□□ -1.22
USP28-205ENST00000537706 HAVCR1Q96D42 359 aa7.46□□□□□ -1.22
USP28-205ENST00000537706 SLC41A3Q96GZ6 507 aa7.46□□□□□ -1.22
USP28-205ENST00000537706 OR5M11Q96RB7 305 aa7.46□□□□□ -1.22
USP28-205ENST00000537706 WNT10AQ9GZT5 417 aa7.46□□□□□ -1.22
USP28-205ENST00000537706 VCXQ9H320 206 aa7.46□□□□□ -1.22
USP28-205ENST00000537706 SIAEQ9HAT2 523 aa7.46□□□□□ -1.22
USP28-205ENST00000537706 SIRT7Q9NRC8 400 aa7.46□□□□□ -1.22
USP28-205ENST00000537706 RLIMQ9NVW2 624 aa7.46□□□□□ -1.22
USP28-205ENST00000537706 ACTR3BQ9P1U1 418 aa7.46□□□□□ -1.22
USP28-205ENST00000537706 AP4S1Q9Y587 144 aa7.46□□□□□ -1.22
USP28-205ENST00000537706 PCLOQ9Y6V0 5065 aa7.45□□□□□ -1.22
USP28-205ENST00000537706 LOC100509620A0A075B734 347 aa7.45□□□□□ -1.22
USP28-205ENST00000537706 TRAV38-1A0A0B4J264 116 aa7.45□□□□□ -1.22
USP28-205ENST00000537706 LGALS8O00214 317 aa7.45□□□□□ -1.22
USP28-205ENST00000537706 RNASET2O00584 256 aaKnown RBP7.45□□□□□ -1.22
USP28-205ENST00000537706 ARPC2O15144 300 aa7.45□□□□□ -1.22
USP28-205ENST00000537706 ADORA3P0DMS8 318 aa7.45□□□□□ -1.22
USP28-205ENST00000537706 GSK3BP49841 420 aa7.45□□□□□ -1.22
USP28-205ENST00000537706 UBE2E1P51965 193 aa7.45□□□□□ -1.22
USP28-205ENST00000537706 PCBD1P61457 104 aa7.45□□□□□ -1.22
USP28-205ENST00000537706 HABP2Q14520 560 aaPredicted RBP7.45□□□□□ -1.22
USP28-205ENST00000537706 PTGR1Q14914 329 aa7.45□□□□□ -1.22
USP28-205ENST00000537706 OR8B8Q15620 311 aa7.45□□□□□ -1.22
USP28-205ENST00000537706 SYPL1Q16563 259 aa7.45□□□□□ -1.22
USP28-205ENST00000537706 LRRC36Q1X8D7 754 aa7.45□□□□□ -1.22
USP28-205ENST00000537706 RNF220Q5VTB9 566 aa7.45□□□□□ -1.22
USP28-205ENST00000537706 LRFN4Q6PJG9 635 aa7.45□□□□□ -1.22
USP28-205ENST00000537706 WDR88Q6ZMY6 472 aa7.45□□□□□ -1.22
USP28-205ENST00000537706 HDDC2Q7Z4H3 204 aa7.45□□□□□ -1.22
USP28-205ENST00000537706 WIPF2Q8TF74 440 aaPredicted RBP7.45□□□□□ -1.22
USP28-205ENST00000537706 ST8SIA4Q92187 359 aa7.45□□□□□ -1.22
USP28-205ENST00000537706 PTP4A1Q93096 173 aa7.45□□□□□ -1.22
USP28-205ENST00000537706 ZNF582Q96NG8 517 aaPredicted RBP7.45□□□□□ -1.22
USP28-205ENST00000537706 CCDC115Q96NT0 180 aa7.45□□□□□ -1.22
USP28-205ENST00000537706 KCTD14Q9BQ13 255 aaPredicted RBP7.45□□□□□ -1.22
USP28-205ENST00000537706 ARMC1Q9NVT9 282 aa7.45□□□□□ -1.22
USP28-205ENST00000537706 CTSZQ9UBR2 303 aa7.45□□□□□ -1.22
USP28-205ENST00000537706 SF3B6Q9Y3B4 125 aaKnown RBP7.45□□□□□ -1.22
USP28-205ENST00000537706 SNX13Q9Y5W8 968 aa7.45□□□□□ -1.22
USP28-205ENST00000537706 DHRS12A0PJE2 317 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 MAGEA13PA6NCF6 341 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 C11orf98E9PRG8 122 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 H0YJX3 145 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 H3BUI4 141 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 CPSF4O95639 269 aaKnown RBP7.44□□□□□ -1.22
USP28-205ENST00000537706 IL6P05231 212 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 GUCA1AP43080 201 aaPredicted RBP7.44□□□□□ -1.22
USP28-205ENST00000537706 LIPEQ05469 1076 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 CNN3Q15417 329 aaKnown RBP7.44□□□□□ -1.22
USP28-205ENST00000537706 RABL3Q5HYI8 236 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 ANXA8L1Q5VT79 327 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 SLC2A7Q6PXP3 512 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 DLEU7Q6UYE1 221 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 CYP2R1Q6VVX0 501 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 CENPVQ7Z7K6 275 aaPredicted RBP7.44□□□□□ -1.22
USP28-205ENST00000537706 CLECL1Q8IZS7 167 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 OR5AS1Q8N127 324 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 OR10AD1Q8NGE0 317 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 OR8J3Q8NGG0 315 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 DNAJA4Q8WW22 397 aaPredicted RBP7.44□□□□□ -1.22
USP28-205ENST00000537706 SLCO4A1Q96BD0 722 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 PRR25Q96S07 402 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 CDCA4Q9BXL8 241 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 Q9H521 79 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 SCOCQ9UIL1 159 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 RAB26Q9ULW5 256 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 ZNF443Q9Y2A4 671 aaPredicted RBP7.44□□□□□ -1.22
USP28-205ENST00000537706 SMAD5-AS1Q9Y6J3 95 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 MEGF11A6BM72 1044 aa7.44□□□□□ -1.22
USP28-205ENST00000537706 HMGN4O00479 90 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms