RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 SYS1Q8N2H4 156 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 ARIH2OSQ8N7S6 290 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 OR51E1Q8TCB6 317 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 ZNF799Q96GE5 643 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 AKR1E2Q96JD6 320 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 NRSN2Q9GZP1 204 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 RNF24Q9Y225 148 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 IL2RAP01589 272 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 MPGP29372 298 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 RAD52P43351 418 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 DIO1P49895 249 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 PFN3P60673 137 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 GNB1P62873 340 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 SUMO1P63165 101 aaKnown RBP9.69□□□□□ -0.86
CLIP1-209ENST00000537178 DOC2BQ14184 412 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 LHFPL2Q6ZUX7 228 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 PGBD5Q8N414 524 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 GPX8Q8TED1 209 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 EDARADDQ8WWZ3 215 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 RDH5Q92781 318 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 ISL2Q96A47 359 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 PDXPQ96GD0 296 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 ZC3HAV1LQ96H79 300 aaKnown RBP9.69□□□□□ -0.86
CLIP1-209ENST00000537178 DCTN6O00399 190 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 PLPP1O14494 284 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 XRCC2O43543 280 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 IGHV3-9P01782 118 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 QDPRP09417 244 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 SELENBP1Q13228 472 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 ZNF787Q6DD87 383 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 FUNDC1Q8IVP5 155 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 BAP18Q8IXM2 172 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 VN1R2Q8NFZ6 395 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 ST8SIA4Q92187 359 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 EMC6Q9BV81 110 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 PRR14Q9BWN1 585 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 DAPP1Q9UN19 280 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 SBF1O95248 1867 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 TMEM235A6NFC5 223 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 ANKRD61A6NGH8 418 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 FAM166BA8MTA8 275 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 GLI4P10075 376 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 SDHAP31040 664 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 AKR1C3P42330 323 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 Q1RN00 199 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 THEM4Q5T1C6 240 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 TMEM268Q5VZI3 342 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 CADM3Q8N126 398 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 OR2AK2Q8NG84 335 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 SARAFQ96BY9 339 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 MENTQ9BUN1 341 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 KLF13Q9Y2Y9 288 aaPredicted RBP9.69□□□□□ -0.86
CLIP1-209ENST00000537178 FAM96BQ9Y3D0 163 aa9.69□□□□□ -0.86
CLIP1-209ENST00000537178 GLRA1P23415 457 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 ZNF750Q32MQ0 723 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 AGBL4Q5VU57 503 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 ZNF425Q6IV72 752 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 RPUSD3Q6P087 351 aaKnown RBP9.68□□□□□ -0.86
CLIP1-209ENST00000537178 PAQR9Q6ZVX9 377 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 VRK3Q8IV63 474 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 PFN4Q8NHR9 129 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 FBXW5Q969U6 566 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 SDF2Q99470 211 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 ZPBPQ9BS86 351 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 FBXO8Q9NRD0 319 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 PPP1R3CQ9UQK1 317 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 MYLKQ15746 1914 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 PDCD11Q14690 1871 aaKnown RBP9.68□□□□□ -0.86
CLIP1-209ENST00000537178 TCAPO15273 167 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 SULT1C4O75897 302 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 TOX4O94842 621 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 MMP7P09237 267 aaPredicted RBP9.68□□□□□ -0.86
CLIP1-209ENST00000537178 ARNTP27540 789 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 RANP62826 216 aaKnown RBP9.68□□□□□ -0.86
CLIP1-209ENST00000537178 CDK5Q00535 292 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 DHODHQ02127 395 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 ACKR1Q16570 336 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 RNF212Q495C1 297 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 KCNE4Q8WWG9 221 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 TMEM230Q96A57 120 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 THOC3Q96J01 351 aaKnown RBP9.68□□□□□ -0.86
CLIP1-209ENST00000537178 CTRCQ99895 268 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 FBXO34Q9NWN3 711 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 ANKRD10Q9NXR5 420 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 SLC23A1Q9UHI7 598 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 MYO18AQ92614 2054 aaKnown RBP9.68□□□□□ -0.86
CLIP1-209ENST00000537178 F11P03951 625 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 RRASP10301 218 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 ISL1P61371 349 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 RPS16P62249 146 aaKnown RBP9.68□□□□□ -0.86
CLIP1-209ENST00000537178 MLF2Q15773 248 aaPredicted RBP9.68□□□□□ -0.86
CLIP1-209ENST00000537178 DRAM2Q6UX65 266 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 DGAT2L6Q6ZPD8 337 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 PELI3Q8N2H9 469 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 CDCA4Q9BXL8 241 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 HES7Q9BYE0 225 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 HINT3Q9NQE9 182 aaKnown RBP9.68□□□□□ -0.86
CLIP1-209ENST00000537178 KCNG2Q9UJ96 466 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 AQP8O94778 261 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 NRASP01111 189 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms