RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	NMT2	O60551	498 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	MB	P02144	154 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	OR56A5	P0C7T3	313 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	PGA5	P0DJD9	388 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	PRKACA	P17612	351 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	SRM	P19623	302 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	RAB5A	P20339	215 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	GABRR2	P28476	465 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	FABP6	P51161	128 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	SYNJ2BP	P57105	145 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	KRTAP12-2	P59991	146 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	ESRRG	P62508	458 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	SYCN	Q0VAF6	134 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	KIR2DS1	Q14954	304 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	TSC22D1	Q15714	1073 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	STK11	Q15831	433 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	FAM83E	Q2M2I3	478 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	TFDP3	Q5H9I0	405 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	GCSAML	Q5JQS6	135 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	LINC00523	Q86TU6	105 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	C11orf72	Q8NBR9	251 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	TMEM104	Q8NE00	496 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	OR2L8	Q8NGY9	312 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	ITFG1	Q8TB96	612 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	C15orf40	Q8WUR7	153 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	NAT6	Q93015	286 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	PTX4	Q96A99	478 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	RBMXL1	Q96E39	390 aa	Known RBP	3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	GPR21	Q99679	349 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	DEFB129	Q9H1M3	183 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	PATZ1	Q9HBE1	687 aa	Known RBP	3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	WFDC1	Q9HC57	220 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	DDX19A	Q9NUU7	478 aa	Known RBP	3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	ADA2	Q9NZK5	511 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	ZNRD1	Q9P1U0	126 aa		3.38	□□□□□ -1.87
PRKDC-208	ENST00000536710	SMIM26	A0A096LP01	95 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	IGKV6D-21	A0A0A0MT36	114 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710		A0A0J9YXV3	536 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	LOC100653049	A0A140TA62	436 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	ANKRD65	E5RJM6	399 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	KRT34	O76011	436 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	CTSL	P07711	333 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	PGA4	P0DJD7	388 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	PGA3	P0DJD8	388 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	PSMC3	P17980	439 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	GABRG2	P18507	467 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	MYL9	P24844	172 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	TALDO1	P37837	337 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	ATP6V0D1	P61421	351 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	YWHAE	P62258	255 aa	Known RBP	3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	LCN2	P80188	198 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	SLC39A6	Q13433	755 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	RBMY1F	Q15415	496 aa	Known RBP	3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	AVPI1	Q5T686	147 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	RWDD4	Q6NW29	188 aa	Known RBP	3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	H3F3C	Q6NXT2	135 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	TMEM205	Q6UW68	189 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	WDR82	Q6UXN9	313 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	MRPL21	Q7Z2W9	205 aa	Known RBP	3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	KIF2B	Q8N4N8	673 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	CSGALNACT2	Q8N6G5	542 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	OR8U1	Q8NH10	309 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	SGTB	Q96EQ0	304 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	SCGB3A2	Q96PL1	93 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	ZNF355P	Q9NSJ1	428 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	SLC17A7	Q9P2U7	560 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	CHTOP	Q9Y3Y2	248 aa	Known RBP	3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	TMEM14A	Q9Y6G1	99 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	PALLD	Q8WX93	1383 aa		3.37	□□□□□ -1.87
PRKDC-208	ENST00000536710	MTCL1	Q9Y4B5	1905 aa	Known RBP	3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	IGHV1-69D	A0A0B4J2H0	117 aa		3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	PDZK1P1	A8MUH7	402 aa		3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	ZNF99	A8MXY4	864 aa	Predicted RBP	3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	ZNF701	M0R085	212 aa	Predicted RBP	3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	SLC19A2	O60779	497 aa		3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	VAMP5	O95183	116 aa		3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	IGKV3-11	P04433	115 aa		3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	ADRA2A	P08913	450 aa		3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	PFN2	P35080	140 aa		3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	RGS19	P49795	217 aa		3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	AP1S2	P56377	157 aa		3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	PFN3	P60673	137 aa		3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	RPL23	P62829	140 aa	Known RBP	3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	CACNG7	P62955	275 aa		3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	ZNF829	Q3KNS6	432 aa	Predicted RBP	3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	HSP90AA4P	Q58FG1	418 aa		3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	ZNF691	Q5VV52	312 aa		3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	FBXW9	Q5XUX1	488 aa		3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	KRTAP5-11	Q6L8G4	156 aa		3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	WDFY1	Q8IWB7	410 aa		3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	OR5AR1	Q8NGP9	310 aa		3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	FLYWCH2	Q96CP2	140 aa	Known RBP	3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	HAUS1	Q96CS2	278 aa		3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	BTN2A3P	Q96KV6	586 aa		3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	RGS18	Q9NS28	235 aa		3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	IFNK	Q9P0W0	207 aa		3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	ADGRA3	Q8IWK6	1321 aa		3.36	□□□□□ -1.87
PRKDC-208	ENST00000536710	GPATCH8	Q9UKJ3	1502 aa	Known RBP	3.35	□□□□□ -1.87
PRKDC-208	ENST00000536710	TRAV6	A0A075B6T7	132 aa		3.35	□□□□□ -1.87
PRKDC-208	ENST00000536710	IGKV1-8	A0A0C4DH67	115 aa		3.35	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms