RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 OR2AJ1Q8NGZ0 328 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 CMBLQ96DG6 245 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 SPSB2Q99619 263 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 DUSP23Q9BVJ7 150 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 KLHL13Q9P2N7 655 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 KIF25Q9UIL4 384 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 TUBAL3A6NHL2 446 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 IGHG1P01857 330 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 CD74P04233 296 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 ZNF735P0CB33 412 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 POU3F2P20265 443 aaPredicted RBP11.69□□□□□ -0.54
LDLR-203ENST00000535915 CDAP32320 146 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 CBX5P45973 191 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 DHPSP49366 369 aaPredicted RBP11.69□□□□□ -0.54
LDLR-203ENST00000535915 SORDQ00796 357 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 ATPAF1Q5TC12 328 aaPredicted RBP11.69□□□□□ -0.54
LDLR-203ENST00000535915 FJX1Q86VR8 437 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 LINC00518Q8N0U6 118 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 SLC22A24Q8N4F4 322 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 NOXO1Q8NFA2 376 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 OR5D14Q8NGL3 314 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 OR13C9Q8NGT0 318 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 SLC22A8Q8TCC7 542 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 RBPMSQ93062 196 aaKnown RBP11.69□□□□□ -0.54
LDLR-203ENST00000535915 SLC6A7Q99884 636 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 FBXL2Q9UKC9 423 aa11.69□□□□□ -0.54
LDLR-203ENST00000535915 RAB27BO00194 218 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 PGA4P0DJD7 388 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 PGA3P0DJD8 388 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 PNLIPP16233 465 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 PPP3CBP16298 524 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 RAB3AP20336 220 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 EPHA8P29322 1005 aaPredicted RBP11.68□□□□□ -0.54
LDLR-203ENST00000535915 SFTPDP35247 375 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 CLDN6P56747 220 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 BAMBIQ13145 260 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 UNC119Q13432 240 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 TAF13Q15543 124 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 CDNFQ49AH0 187 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 ALKAL2Q6UX46 152 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 TRAPPC6BQ86SZ2 158 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 COMMD2Q86X83 199 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 PPP1R3BQ86XI6 285 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 PAQR4Q8N4S7 273 aaPredicted RBP11.68□□□□□ -0.54
LDLR-203ENST00000535915 OR51E1Q8TCB6 317 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 ST8SIA4Q92187 359 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 AQP3Q92482 292 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 CCDC74BQ96LY2 380 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 ZNF107Q9UII5 783 aaPredicted RBP11.68□□□□□ -0.54
LDLR-203ENST00000535915 LHFPL6Q9Y693 200 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 WIPF3A6NGB9 483 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 DISC1C4P0D8 188 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 ZNF878C9JN71 531 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 NDUFA2O43678 99 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 SIGLEC6O43699 453 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 PRKXP51817 358 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 MFAP5Q13361 173 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 ZNF260Q3ZCT1 412 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 ZNF385CQ66K41 422 aaPredicted RBP11.68□□□□□ -0.54
LDLR-203ENST00000535915 PTCRAQ6ISU1 281 aaPredicted RBP11.68□□□□□ -0.54
LDLR-203ENST00000535915 C17orf107Q6ZR85 190 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 STEAP2Q8NFT2 490 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 DEFB126Q9BYW3 111 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 C19orf25Q9UFG5 118 aaPredicted RBP11.68□□□□□ -0.54
LDLR-203ENST00000535915 FBXO4Q9UKT5 387 aa11.68□□□□□ -0.54
LDLR-203ENST00000535915 LOC100509620A0A075B734 347 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 IGLV3-32A0A0A0MS00 114 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 SMAD9O15198 467 aaKnown RBP11.67□□□□□ -0.54
LDLR-203ENST00000535915 ZNF20P17024 532 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 MEF2DQ14814 521 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 RNASE10Q5GAN6 216 aaKnown RBP11.67□□□□□ -0.54
LDLR-203ENST00000535915 GSG1LQ6UXU4 331 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 GVQW1Q8N7I0 195 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 OR2M3Q8NG83 312 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 OR13C8Q8NGS7 320 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 COQ8AQ8NI60 647 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 RASL10BQ96S79 203 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 FSCN3Q9NQT6 498 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 PISDQ9UG56 409 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 NCOA6Q14686 2063 aaPredicted RBP11.67□□□□□ -0.54
LDLR-203ENST00000535915 LY6G6EA0A0G2JKS1 128 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 ZNF814B7Z6K7 855 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 BPNT1O95861 308 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 VSIG8P0DPA2 414 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 LIPCP11150 499 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 SLC2A1P11166 492 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 CXADRP78310 365 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 DHRS2Q13268 280 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 AWAT2Q6E213 333 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 OR4K17Q8NGC6 315 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 NUDCD2Q8WVJ2 157 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 ASB13Q8WXK3 278 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 SPACA9Q96E40 222 aaPredicted RBP11.67□□□□□ -0.54
LDLR-203ENST00000535915 MFFQ9GZY8 342 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 AKIRIN1Q9H9L7 192 aaPredicted RBP11.67□□□□□ -0.54
LDLR-203ENST00000535915 ASH2LQ9UBL3 628 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 U3KQA8 63 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 POM121CA8CG34 1229 aa11.67□□□□□ -0.54
LDLR-203ENST00000535915 NUPL2O15504 423 aaKnown RBP11.67□□□□□ -0.54
LDLR-203ENST00000535915 TRAF3IP2O43734 574 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms