RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 KMT2CQ8NEZ4 4911 aaKnown RBP8.44□□□□□ -1.06
CLSTN3-203ENST00000534830 TCRBV5S2A0A599 114 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 GASTP01350 101 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 ZNF12P17014 697 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 FPR2P25090 351 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 OTX1P32242 354 aaPredicted RBP8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 MDH2P40926 338 aaKnown RBP8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 PMELP40967 661 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 GATA4P43694 442 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 GYS2P54840 703 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 IL13RA1P78552 427 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 PAX8Q06710 450 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 ECH1Q13011 328 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 ZNF154Q13106 437 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 PCK2Q16822 640 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 SLC36A3Q495N2 470 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 FBLN7Q53RD9 439 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 C16orf89Q6UX73 402 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 LINC00346Q8IVM7 164 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 KLHL36Q8N4N3 616 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 CELF2-AS1Q8N7Q2 184 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 SDR9C7Q8NEX9 313 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 OR52E2Q8NGJ4 325 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 OR10S1Q8NGN2 331 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 ZNF420Q8TAQ5 688 aaPredicted RBP8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 ZNRF4Q8WWF5 429 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 POP5Q969H6 163 aaKnown RBP8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 DACT3Q96B18 629 aaPredicted RBP8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 MAP6Q96JE9 813 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 ZNF582Q96NG8 517 aaPredicted RBP8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 ATF6BQ99941 703 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 SLITRK2Q9H156 845 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 FN3KQ9H479 309 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 EGLN3Q9H6Z9 239 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 TMEM165Q9HC07 324 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 NDE1Q9NXR1 346 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 ACTR3BQ9P1U1 418 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 KCNG2Q9UJ96 466 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 POLR1DQ9Y2S0 133 aa8.43□□□□□ -1.06
CLSTN3-203ENST00000534830 CEACAM18A8MTB9 384 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 F5H5K5 113 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 DCTN3O75935 186 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 PSKH1P11801 424 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 SELEP16581 610 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 ATP6V1B2P21281 511 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 ANOS1P23352 680 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 PRTN3P24158 256 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 NOS3P29474 1203 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 CENPAP49450 140 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 RAD23AP54725 363 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 GNGT1P63211 74 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 TRAP1Q12931 704 aaKnown RBP8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 MAB21L1Q13394 359 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 GK2Q14410 553 aaPredicted RBP8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 KLF17Q5JT82 389 aaPredicted RBP8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 SLC35F1Q5T1Q4 408 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 RPL13AP3Q6NVV1 102 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 RASSF6Q6ZTQ3 369 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 ZNF771Q7L3S4 317 aaPredicted RBP8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 C1QL4Q86Z23 238 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 MUC20Q8N307 709 aaPredicted RBP8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 LINC00471Q8N535 108 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 FITM2Q8N6M3 262 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 SIGLECL1Q8N7X8 197 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 ATG16L2Q8NAA4 619 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 OR10AD1Q8NGE0 317 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 OR9Q2Q8NGE9 314 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 OR8D4Q8NGM9 314 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 PITX2Q99697 317 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 TMEM100Q9NV29 134 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 TMCC3Q9ULS5 477 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 CDH10Q9Y6N8 788 aa8.42□□□□□ -1.06
CLSTN3-203ENST00000534830 DNAJC9-AS1A6NH13 148 aa8.41□□□□□ -1.06
CLSTN3-203ENST00000534830 F5H5P2 479 aa8.41□□□□□ -1.06
CLSTN3-203ENST00000534830 TNFRSF11BO00300 401 aa8.41□□□□□ -1.06
CLSTN3-203ENST00000534830 PTBP3O95758 552 aaKnown RBP8.41□□□□□ -1.06
CLSTN3-203ENST00000534830 CYB5R3P00387 301 aaPredicted RBP8.41□□□□□ -1.06
CLSTN3-203ENST00000534830 PPIAL4GP0DN37 164 aa8.41□□□□□ -1.06
CLSTN3-203ENST00000534830 CD200P41217 278 aa8.41□□□□□ -1.06
CLSTN3-203ENST00000534830 SRP9P49458 86 aaKnown RBP8.41□□□□□ -1.06
CLSTN3-203ENST00000534830 MS4A2Q01362 244 aa8.41□□□□□ -1.06
CLSTN3-203ENST00000534830 ZNF404Q494X3 552 aa8.41□□□□□ -1.06
CLSTN3-203ENST00000534830 CLEC12AQ5QGZ9 265 aa8.41□□□□□ -1.06
CLSTN3-203ENST00000534830 LCN8Q6JVE9 175 aa8.41□□□□□ -1.06
CLSTN3-203ENST00000534830 CYP2R1Q6VVX0 501 aa8.41□□□□□ -1.06
CLSTN3-203ENST00000534830 ARHGAP24Q8N264 748 aa8.41□□□□□ -1.06
CLSTN3-203ENST00000534830 LNX2Q8N448 690 aa8.41□□□□□ -1.06
CLSTN3-203ENST00000534830 CYB561A3Q8NBI2 242 aa8.41□□□□□ -1.06
CLSTN3-203ENST00000534830 SLC37A3Q8NCC5 494 aa8.41□□□□□ -1.06
CLSTN3-203ENST00000534830 OR2AJ1Q8NGZ0 328 aa8.41□□□□□ -1.06
CLSTN3-203ENST00000534830 Q8TCH9 128 aa8.41□□□□□ -1.06
CLSTN3-203ENST00000534830 TAF15Q92804 592 aaKnown RBP eCLIP8.41□□□□□ -1.06
CLSTN3-203ENST00000534830 ERGIC1Q969X5 290 aa8.41□□□□□ -1.06
CLSTN3-203ENST00000534830 CCT8L2Q96SF2 557 aa8.41□□□□□ -1.06
CLSTN3-203ENST00000534830 TMEM246Q9BRR3 403 aa8.41□□□□□ -1.06
CLSTN3-203ENST00000534830 CDADC1Q9BWV3 514 aa8.41□□□□□ -1.06
CLSTN3-203ENST00000534830 DGCR6LQ9BY27 220 aa8.41□□□□□ -1.06
CLSTN3-203ENST00000534830 NMNAT2Q9BZQ4 307 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms